RNA–Protein interactions for RNA: ENST00000562609.2

GTF3C1-203, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 5

Gene GTF3C1, Length 2,824 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-203ENST00000562609 LINC00301Q8NCQ3 95 aa15.82■□□□□ 0.12
GTF3C1-203ENST00000562609 NKX2-3Q8TAU0 364 aa15.82■□□□□ 0.12
GTF3C1-203ENST00000562609 LAMA4Q16363 1823 aa15.82■□□□□ 0.12
GTF3C1-203ENST00000562609 GOLGA6CA6NDK9 693 aa15.82■□□□□ 0.12
GTF3C1-203ENST00000562609 PFKFB2O60825 505 aa15.82■□□□□ 0.12
GTF3C1-203ENST00000562609 CTDNEP1O95476 244 aa15.82■□□□□ 0.12
GTF3C1-203ENST00000562609 NTSR2O95665 410 aa15.82■□□□□ 0.12
GTF3C1-203ENST00000562609 GOLGA6DP0CG33 693 aa15.82■□□□□ 0.12
GTF3C1-203ENST00000562609 BCAMP50895 628 aa15.82■□□□□ 0.12
GTF3C1-203ENST00000562609 TUBB2AQ13885 445 aa15.82■□□□□ 0.12
GTF3C1-203ENST00000562609 C11orf91Q3C1V1 193 aa15.82■□□□□ 0.12
GTF3C1-203ENST00000562609 PREPLQ4J6C6 727 aaPredicted RBP15.82■□□□□ 0.12
GTF3C1-203ENST00000562609 PPP1R3FQ6ZSY5 799 aaPredicted RBP15.82■□□□□ 0.12
GTF3C1-203ENST00000562609 OTUD6BQ8N6M0 293 aa15.82■□□□□ 0.12
GTF3C1-203ENST00000562609 LLPHQ9BRT6 129 aaKnown RBP15.82■□□□□ 0.12
GTF3C1-203ENST00000562609 TUBB2BQ9BVA1 445 aa15.82■□□□□ 0.12
GTF3C1-203ENST00000562609 CAPS2Q9BXY5 557 aa15.82■□□□□ 0.12
GTF3C1-203ENST00000562609 GOLGA6AQ9NYA3 693 aa15.82■□□□□ 0.12
GTF3C1-203ENST00000562609 AKAP11Q9UKA4 1901 aa15.82■□□□□ 0.12
GTF3C1-203ENST00000562609 SARNPP82979 210 aaKnown RBP15.81■□□□□ 0.12
GTF3C1-203ENST00000562609 EXOSC10Q01780 885 aaKnown RBP15.81■□□□□ 0.12
GTF3C1-203ENST00000562609 PUM3Q15397 648 aaKnown RBP15.81■□□□□ 0.12
GTF3C1-203ENST00000562609 SLC35F6Q8N357 371 aa15.81■□□□□ 0.12
GTF3C1-203ENST00000562609 ADGRG1Q9Y653 693 aa15.81■□□□□ 0.12
GTF3C1-203ENST00000562609 ZNF532Q9HCE3 1301 aa15.81■□□□□ 0.12
GTF3C1-203ENST00000562609 ZC3H4Q9UPT8 1303 aaKnown RBP15.81■□□□□ 0.12
GTF3C1-203ENST00000562609 KIAA0754O94854 1291 aa15.81■□□□□ 0.12
GTF3C1-203ENST00000562609 GNGT1P63211 74 aa15.81■□□□□ 0.12
GTF3C1-203ENST00000562609 LPIN2Q92539 896 aa15.81■□□□□ 0.12
GTF3C1-203ENST00000562609 EIF3HO15372 352 aaKnown RBP eCLIP15.81■□□□□ 0.12
GTF3C1-203ENST00000562609 RASGRF1Q13972 1273 aa15.81■□□□□ 0.12
GTF3C1-203ENST00000562609 WHAMMP3Q1A5X7 153 aa15.81■□□□□ 0.12
GTF3C1-203ENST00000562609 ERFEQ4G0M1 354 aa15.81■□□□□ 0.12
GTF3C1-203ENST00000562609 CRACR2AQ9BSW2 395 aa15.81■□□□□ 0.12
GTF3C1-203ENST00000562609 INCENPQ9NQS7 918 aa15.81■□□□□ 0.12
GTF3C1-203ENST00000562609 ZFYP08048 801 aaPredicted RBP15.8■□□□□ 0.12
GTF3C1-203ENST00000562609 PFKFB1P16118 471 aa15.8■□□□□ 0.12
GTF3C1-203ENST00000562609 ADD2P35612 726 aa15.8■□□□□ 0.12
GTF3C1-203ENST00000562609 PPFIA1Q13136 1202 aa15.8■□□□□ 0.12
GTF3C1-203ENST00000562609 IMMTQ16891 758 aaKnown RBP15.8■□□□□ 0.12
GTF3C1-203ENST00000562609 DHX30Q7L2E3 1194 aaKnown RBP eCLIP15.8■□□□□ 0.12
GTF3C1-203ENST00000562609 IQCA1Q86XH1 822 aa15.8■□□□□ 0.12
GTF3C1-203ENST00000562609 AMOTL1Q8IY63 956 aa15.8■□□□□ 0.12
GTF3C1-203ENST00000562609 STK11IPQ8N1F8 1099 aa15.8■□□□□ 0.12
GTF3C1-203ENST00000562609 CCDC148Q8NFR7 591 aa15.8■□□□□ 0.12
GTF3C1-203ENST00000562609 KCNG4Q8TDN1 519 aa15.8■□□□□ 0.12
GTF3C1-203ENST00000562609 COG1Q8WTW3 980 aa15.8■□□□□ 0.12
GTF3C1-203ENST00000562609 CDC5LQ99459 802 aaKnown RBP15.8■□□□□ 0.12
GTF3C1-203ENST00000562609 TAF1P21675 1872 aa15.8■□□□□ 0.12
GTF3C1-203ENST00000562609 SPTLC2O15270 562 aa15.8■□□□□ 0.12
GTF3C1-203ENST00000562609 POLR3DP05423 398 aaPredicted RBP15.8■□□□□ 0.12
GTF3C1-203ENST00000562609 NCAPH2Q6IBW4 605 aa15.8■□□□□ 0.12
GTF3C1-203ENST00000562609 OLFM4Q6UX06 510 aa15.8■□□□□ 0.12
GTF3C1-203ENST00000562609 RAD9BQ6WBX8 426 aa15.8■□□□□ 0.12
GTF3C1-203ENST00000562609 FMNL3Q8IVF7 1028 aa15.8■□□□□ 0.12
GTF3C1-203ENST00000562609 DDX24Q9GZR7 859 aaKnown RBP eCLIP15.8■□□□□ 0.12
GTF3C1-203ENST00000562609 SRP68Q9UHB9 627 aaKnown RBP15.8■□□□□ 0.12
GTF3C1-203ENST00000562609 FSBPO95073 299 aa15.79■□□□□ 0.12
GTF3C1-203ENST00000562609 ERCC3P19447 782 aa15.79■□□□□ 0.12
GTF3C1-203ENST00000562609 FGFR2P21802 821 aa15.79■□□□□ 0.12
GTF3C1-203ENST00000562609 CCDC152Q4G0S7 254 aa15.79■□□□□ 0.12
GTF3C1-203ENST00000562609 TRIM6Q9C030 488 aaPredicted RBP15.79■□□□□ 0.12
GTF3C1-203ENST00000562609 GRIN2DO15399 1336 aa15.79■□□□□ 0.12
GTF3C1-203ENST00000562609 COL4A1P02462 1669 aa15.79■□□□□ 0.12
GTF3C1-203ENST00000562609 HMGB1P09429 215 aaKnown RBP15.79■□□□□ 0.12
GTF3C1-203ENST00000562609 PDE6AP16499 860 aa15.79■□□□□ 0.12
GTF3C1-203ENST00000562609 AMIGO3Q86WK7 504 aa15.79■□□□□ 0.12
GTF3C1-203ENST00000562609 SPATA5Q8NB90 893 aa15.79■□□□□ 0.12
GTF3C1-203ENST00000562609 NAPGQ99747 312 aaPredicted RBP15.79■□□□□ 0.12
GTF3C1-203ENST00000562609 MROH5Q6ZUA9 1318 aa15.79■□□□□ 0.12
GTF3C1-203ENST00000562609 BCL9LQ86UU0 1499 aa15.78■□□□□ 0.12
GTF3C1-203ENST00000562609 AGPSO00116 658 aa15.78■□□□□ 0.12
GTF3C1-203ENST00000562609 ZNF213O14771 459 aa15.78■□□□□ 0.12
GTF3C1-203ENST00000562609 IGHMBP2P38935 993 aaKnown RBP15.78■□□□□ 0.12
GTF3C1-203ENST00000562609 CHRNDQ07001 517 aa15.78■□□□□ 0.12
GTF3C1-203ENST00000562609 ACTN3Q08043 901 aaPredicted RBP15.78■□□□□ 0.12
GTF3C1-203ENST00000562609 MAGEB6Q8N7X4 407 aa15.78■□□□□ 0.12
GTF3C1-203ENST00000562609 CENPHQ9H3R5 247 aa15.78■□□□□ 0.12
GTF3C1-203ENST00000562609 TUBE1Q9UJT0 475 aa15.78■□□□□ 0.12
GTF3C1-203ENST00000562609 MYH15Q9Y2K3 1946 aa15.78■□□□□ 0.12
GTF3C1-203ENST00000562609 FRMD3A2A2Y4 597 aa15.78■□□□□ 0.12
GTF3C1-203ENST00000562609 SLC5A1P13866 664 aa15.78■□□□□ 0.12
GTF3C1-203ENST00000562609 PDIA3P30101 505 aaKnown RBP15.78■□□□□ 0.12
GTF3C1-203ENST00000562609 PNOCQ13519 176 aa15.78■□□□□ 0.12
GTF3C1-203ENST00000562609 CRYMQ14894 314 aa15.78■□□□□ 0.12
GTF3C1-203ENST00000562609 PARP10Q53GL7 1025 aa15.78■□□□□ 0.12
GTF3C1-203ENST00000562609 KLC4Q9NSK0 619 aa15.78■□□□□ 0.12
GTF3C1-203ENST00000562609 NDUFAB1O14561 156 aa15.77■□□□□ 0.12
GTF3C1-203ENST00000562609 INHBEP58166 350 aa15.77■□□□□ 0.12
GTF3C1-203ENST00000562609 IRX1P78414 480 aaPredicted RBP15.77■□□□□ 0.12
GTF3C1-203ENST00000562609 OTUD7BQ6GQQ9 843 aa15.77■□□□□ 0.12
GTF3C1-203ENST00000562609 B4GALNT4Q76KP1 1039 aa15.77■□□□□ 0.12
GTF3C1-203ENST00000562609 USP21Q9UK80 565 aa15.77■□□□□ 0.12
GTF3C1-203ENST00000562609 NWD2Q9ULI1 1742 aa15.77■□□□□ 0.12
GTF3C1-203ENST00000562609 MEFVO15553 781 aaPredicted RBP15.77■□□□□ 0.11
GTF3C1-203ENST00000562609 MYO1BO43795 1136 aa15.77■□□□□ 0.11
GTF3C1-203ENST00000562609 ARID4AP29374 1257 aaPredicted RBP15.77■□□□□ 0.11
GTF3C1-203ENST00000562609 TBC1D9BQ66K14 1250 aa15.77■□□□□ 0.11
GTF3C1-203ENST00000562609 SPEF2Q9C093 1822 aa15.77■□□□□ 0.11
GTF3C1-203ENST00000562609 AKR1B15C9JRZ8 316 aaPredicted RBP15.76■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms