RNA–Protein interactions for RNA: ENST00000562045.1

SYNGR3-202, Transcript of synaptogyrin 3, humanhuman

TSL 2 BASIC

Gene SYNGR3, Length 1,743 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR3-202ENST00000562045 IL17RBQ9NRM6 502 aa26.37■■□□□ 1.81
SYNGR3-202ENST00000562045 TSKSQ9UJT2 592 aa26.37■■□□□ 1.81
SYNGR3-202ENST00000562045 PLIN4Q96Q06 1357 aa26.37■■□□□ 1.81
SYNGR3-202ENST00000562045 WDR19Q8NEZ3 1342 aa26.37■■□□□ 1.81
SYNGR3-202ENST00000562045 USP17L10C9JJH3 530 aa26.36■■□□□ 1.81
SYNGR3-202ENST00000562045 TSPY3P0CV98 308 aa26.36■■□□□ 1.81
SYNGR3-202ENST00000562045 TSPY8P0CW00 308 aa26.36■■□□□ 1.81
SYNGR3-202ENST00000562045 EEF2P13639 858 aaKnown RBP26.36■■□□□ 1.81
SYNGR3-202ENST00000562045 INHBEP58166 350 aa26.36■■□□□ 1.81
SYNGR3-202ENST00000562045 TREML2Q5T2D2 321 aa26.36■■□□□ 1.81
SYNGR3-202ENST00000562045 GADL1Q6ZQY3 521 aa26.36■■□□□ 1.81
SYNGR3-202ENST00000562045 CEP95Q96GE4 821 aa26.36■■□□□ 1.81
SYNGR3-202ENST00000562045 EMILIN3Q9NT22 766 aa26.36■■□□□ 1.81
SYNGR3-202ENST00000562045 TSPY2A6NKD2 308 aa26.36■■□□□ 1.81
SYNGR3-202ENST00000562045 TRPA1O75762 1119 aa26.36■■□□□ 1.81
SYNGR3-202ENST00000562045 SH3D19Q5HYK7 790 aa26.36■■□□□ 1.81
SYNGR3-202ENST00000562045 KIAA1755Q5JYT7 1200 aa26.36■■□□□ 1.81
SYNGR3-202ENST00000562045 R3HDMLQ9H3Y0 253 aa26.36■■□□□ 1.81
SYNGR3-202ENST00000562045 LIMCH1Q9UPQ0 1083 aa26.36■■□□□ 1.81
SYNGR3-202ENST00000562045 HSPA1AP0DMV8 641 aaKnown RBP26.35■■□□□ 1.81
SYNGR3-202ENST00000562045 HSPA1BP0DMV9 641 aaKnown RBP26.35■■□□□ 1.81
SYNGR3-202ENST00000562045 FGD1P98174 961 aa26.35■■□□□ 1.81
SYNGR3-202ENST00000562045 NOL8Q76FK4 1167 aaKnown RBP26.35■■□□□ 1.81
SYNGR3-202ENST00000562045 REM2Q8IYK8 340 aaPredicted RBP26.35■■□□□ 1.81
SYNGR3-202ENST00000562045 KANSL2Q9H9L4 492 aa26.35■■□□□ 1.81
SYNGR3-202ENST00000562045 B4E1Z4 1266 aa26.34■■□□□ 1.81
SYNGR3-202ENST00000562045 ATP2B2Q01814 1243 aa26.34■■□□□ 1.81
SYNGR3-202ENST00000562045 Q6ZUG5 572 aa26.34■■□□□ 1.81
SYNGR3-202ENST00000562045 TMX3Q96JJ7 454 aa26.34■■□□□ 1.81
SYNGR3-202ENST00000562045 PRC1O43663 620 aa26.34■■□□□ 1.81
SYNGR3-202ENST00000562045 TOB2Q14106 344 aaPredicted RBP26.34■■□□□ 1.81
SYNGR3-202ENST00000562045 FBXL16Q8N461 479 aa26.34■■□□□ 1.81
SYNGR3-202ENST00000562045 FEZ1Q99689 392 aa26.34■■□□□ 1.81
SYNGR3-202ENST00000562045 KIAA1683Q9H0B3 1180 aa26.34■■□□□ 1.81
SYNGR3-202ENST00000562045 MTMR4Q9NYA4 1195 aa26.34■■□□□ 1.81
SYNGR3-202ENST00000562045 KDM4AO75164 1064 aa26.33■■□□□ 1.81
SYNGR3-202ENST00000562045 HSP90AA1P07900 732 aaKnown RBP26.33■■□□□ 1.81
SYNGR3-202ENST00000562045 NT5C2P49902 561 aa26.33■■□□□ 1.81
SYNGR3-202ENST00000562045 ESR2Q92731 530 aa26.33■■□□□ 1.81
SYNGR3-202ENST00000562045 AGXT2Q9BYV1 514 aa26.33■■□□□ 1.81
SYNGR3-202ENST00000562045 C19orf81C9J6K1 198 aa26.32■■□□□ 1.8
SYNGR3-202ENST00000562045 FOXN1O15353 648 aa26.32■■□□□ 1.8
SYNGR3-202ENST00000562045 TBC1D8O95759 1140 aa26.32■■□□□ 1.8
SYNGR3-202ENST00000562045 CHST3Q7LGC8 479 aa26.32■■□□□ 1.8
SYNGR3-202ENST00000562045 ZSCAN31Q96LW9 406 aaPredicted RBP26.32■■□□□ 1.8
SYNGR3-202ENST00000562045 ZKSCAN3Q9BRR0 538 aa26.32■■□□□ 1.8
SYNGR3-202ENST00000562045 CLIP2Q9UDT6 1046 aa26.32■■□□□ 1.8
SYNGR3-202ENST00000562045 TMX2Q9Y320 296 aa26.32■■□□□ 1.8
SYNGR3-202ENST00000562045 PDHXO00330 501 aa26.31■■□□□ 1.8
SYNGR3-202ENST00000562045 ANTXR2P58335 489 aa26.31■■□□□ 1.8
SYNGR3-202ENST00000562045 FASTKD5Q7L8L6 764 aaKnown RBP26.31■■□□□ 1.8
SYNGR3-202ENST00000562045 ANKRD23Q86SG2 305 aa26.31■■□□□ 1.8
SYNGR3-202ENST00000562045 LRRC2Q9BYS8 371 aa26.31■■□□□ 1.8
SYNGR3-202ENST00000562045 PROCA1Q8NCQ7 364 aaPredicted RBP26.31■■□□□ 1.8
SYNGR3-202ENST00000562045 ARHGEF10LQ9HCE6 1279 aa26.31■■□□□ 1.8
SYNGR3-202ENST00000562045 SH2B1Q9NRF2 756 aaPredicted RBP26.31■■□□□ 1.8
SYNGR3-202ENST00000562045 ZSWIM5Q9P217 1185 aa26.31■■□□□ 1.8
SYNGR3-202ENST00000562045 NYAP2Q9P242 653 aa26.31■■□□□ 1.8
SYNGR3-202ENST00000562045 AGTPBP1Q9UPW5 1226 aa26.31■■□□□ 1.8
SYNGR3-202ENST00000562045 USP17L2Q6R6M4 530 aa26.3■■□□□ 1.8
SYNGR3-202ENST00000562045 CYB5R4Q7L1T6 521 aa26.3■■□□□ 1.8
SYNGR3-202ENST00000562045 SPICE1Q8N0Z3 855 aa26.3■■□□□ 1.8
SYNGR3-202ENST00000562045 BRF1Q92994 677 aa26.3■■□□□ 1.8
SYNGR3-202ENST00000562045 TMEM87BQ96K49 555 aa26.3■■□□□ 1.8
SYNGR3-202ENST00000562045 CYP2C8P10632 490 aa26.29■■□□□ 1.8
SYNGR3-202ENST00000562045 CRHR2Q13324 411 aa26.29■■□□□ 1.8
SYNGR3-202ENST00000562045 LRRC47Q8N1G4 583 aaKnown RBP26.29■■□□□ 1.8
SYNGR3-202ENST00000562045 C12orf42Q96LP6 360 aa26.29■■□□□ 1.8
SYNGR3-202ENST00000562045 MTA3Q9BTC8 594 aa26.29■■□□□ 1.8
SYNGR3-202ENST00000562045 BEGAINQ9BUH8 593 aa26.29■■□□□ 1.8
SYNGR3-202ENST00000562045 TMOD4Q9NZQ9 345 aa26.29■■□□□ 1.8
SYNGR3-202ENST00000562045 TPCN1Q9ULQ1 816 aa26.29■■□□□ 1.8
SYNGR3-202ENST00000562045 VCAM1P19320 739 aa26.28■■□□□ 1.8
SYNGR3-202ENST00000562045 LARP6Q9BRS8 491 aaKnown RBP26.28■■□□□ 1.8
SYNGR3-202ENST00000562045 TTLL1O95922 423 aa26.28■■□□□ 1.8
SYNGR3-202ENST00000562045 NOVP48745 357 aa26.28■■□□□ 1.8
SYNGR3-202ENST00000562045 CUL4AQ13619 759 aa26.28■■□□□ 1.8
SYNGR3-202ENST00000562045 SART3Q15020 963 aaKnown RBP26.28■■□□□ 1.8
SYNGR3-202ENST00000562045 TAF1CQ15572 869 aaPredicted RBP26.28■■□□□ 1.8
SYNGR3-202ENST00000562045 RCSD1Q6JBY9 416 aa26.28■■□□□ 1.8
SYNGR3-202ENST00000562045 STX8Q9UNK0 236 aa26.28■■□□□ 1.8
SYNGR3-202ENST00000562045 USP14P54578 494 aa26.27■■□□□ 1.8
SYNGR3-202ENST00000562045 OTUD7BQ6GQQ9 843 aa26.27■■□□□ 1.8
SYNGR3-202ENST00000562045 SPRYD3Q8NCJ5 442 aa26.27■■□□□ 1.8
SYNGR3-202ENST00000562045 MKL1Q969V6 931 aa26.27■■□□□ 1.8
SYNGR3-202ENST00000562045 VCPKMTQ9H867 229 aa26.27■■□□□ 1.8
SYNGR3-202ENST00000562045 TCP11L1Q9NUJ3 509 aa26.27■■□□□ 1.8
SYNGR3-202ENST00000562045 SAGE1Q9NXZ1 904 aa26.27■■□□□ 1.8
SYNGR3-202ENST00000562045 CA12O43570 354 aa26.26■■□□□ 1.79
SYNGR3-202ENST00000562045 RASGRP2Q7LDG7 609 aa26.26■■□□□ 1.79
SYNGR3-202ENST00000562045 CHMP4CQ96CF2 233 aa26.26■■□□□ 1.79
SYNGR3-202ENST00000562045 RLFQ13129 1914 aa26.26■■□□□ 1.79
SYNGR3-202ENST00000562045 PARP14Q460N5 1801 aa26.26■■□□□ 1.79
SYNGR3-202ENST00000562045 ALDH1A1P00352 501 aa26.25■■□□□ 1.79
SYNGR3-202ENST00000562045 ERICH2A1L162 156 aa26.25■■□□□ 1.79
SYNGR3-202ENST00000562045 SH2B2O14492 632 aaPredicted RBP26.25■■□□□ 1.79
SYNGR3-202ENST00000562045 IFIT3O14879 490 aaKnown RBP26.25■■□□□ 1.79
SYNGR3-202ENST00000562045 HSPA8P11142 646 aaKnown RBP26.25■■□□□ 1.79
SYNGR3-202ENST00000562045 ME3Q16798 604 aa26.25■■□□□ 1.79
SYNGR3-202ENST00000562045 IQCA1Q86XH1 822 aa26.25■■□□□ 1.79
Retrieved 100 of 20,778 RNA–protein pairs in 157.1 ms