RNA–Protein interactions for RNA: ENST00000562038.1

LINC01963-201, Transcript of long intergenic non-protein coding RNA 1963, humanhuman

BASIC

Gene LINC01963, Length 3,148 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01963-201ENST00000562038 SNAPC2Q13487 334 aa6.67□□□□□ -1.34
LINC01963-201ENST00000562038 TKFCQ3LXA3 575 aa6.67□□□□□ -1.34
LINC01963-201ENST00000562038 OTUD7BQ6GQQ9 843 aa6.67□□□□□ -1.34
LINC01963-201ENST00000562038 PPP1R3FQ6ZSY5 799 aaPredicted RBP6.67□□□□□ -1.34
LINC01963-201ENST00000562038 OTUD7AQ8TE49 926 aaPredicted RBP6.67□□□□□ -1.34
LINC01963-201ENST00000562038 AGXT2Q9BYV1 514 aa6.67□□□□□ -1.34
LINC01963-201ENST00000562038 LSG1Q9H089 658 aaKnown RBP6.67□□□□□ -1.34
LINC01963-201ENST00000562038 KANSL2Q9H9L4 492 aa6.67□□□□□ -1.34
LINC01963-201ENST00000562038 PNMA3Q9UL41 463 aa6.67□□□□□ -1.34
LINC01963-201ENST00000562038 SNHG28P0DPA3 235 aa6.67□□□□□ -1.34
LINC01963-201ENST00000562038 USP5P45974 858 aa6.67□□□□□ -1.34
LINC01963-201ENST00000562038 GCLCP48506 637 aaPredicted RBP6.67□□□□□ -1.34
LINC01963-201ENST00000562038 PPARAQ07869 468 aa6.67□□□□□ -1.34
LINC01963-201ENST00000562038 BTNL9Q6UXG8 535 aa6.67□□□□□ -1.34
LINC01963-201ENST00000562038 OTOP1Q7RTM1 612 aa6.67□□□□□ -1.34
LINC01963-201ENST00000562038 TRMT44Q8IYL2 757 aaKnown RBP6.67□□□□□ -1.34
LINC01963-201ENST00000562038 DCAF4Q8WV16 495 aa6.67□□□□□ -1.34
LINC01963-201ENST00000562038 DNAJC18Q9H819 358 aa6.67□□□□□ -1.34
LINC01963-201ENST00000562038 AATFQ9NY61 560 aaKnown RBP eCLIP6.67□□□□□ -1.34
LINC01963-201ENST00000562038 ZBTB21Q9ULJ3 1066 aa6.67□□□□□ -1.34
LINC01963-201ENST00000562038 TMX2Q9Y320 296 aa6.67□□□□□ -1.34
LINC01963-201ENST00000562038 SLC4A4Q9Y6R1 1079 aa6.67□□□□□ -1.34
LINC01963-201ENST00000562038 PTPRAP18433 802 aa6.66□□□□□ -1.34
LINC01963-201ENST00000562038 NFIAQ12857 509 aa6.66□□□□□ -1.34
LINC01963-201ENST00000562038 ARHGEF6Q15052 776 aa6.66□□□□□ -1.34
LINC01963-201ENST00000562038 EAPPQ56P03 285 aaPredicted RBP6.66□□□□□ -1.34
LINC01963-201ENST00000562038 RNF20Q5VTR2 975 aa6.66□□□□□ -1.34
LINC01963-201ENST00000562038 TMTC2Q8N394 836 aa6.66□□□□□ -1.34
LINC01963-201ENST00000562038 SHISA4Q96DD7 197 aa6.66□□□□□ -1.34
LINC01963-201ENST00000562038 MS4A4AQ96JQ5 239 aa6.66□□□□□ -1.34
LINC01963-201ENST00000562038 A0A0D9SFI3 127 aa6.66□□□□□ -1.34
LINC01963-201ENST00000562038 DDTLA6NHG4 134 aaPredicted RBP6.66□□□□□ -1.34
LINC01963-201ENST00000562038 WDR46O15213 610 aaKnown RBP6.66□□□□□ -1.34
LINC01963-201ENST00000562038 COL11A1P12107 1806 aaPredicted RBP6.66□□□□□ -1.34
LINC01963-201ENST00000562038 NECTIN1Q15223 517 aa6.66□□□□□ -1.34
LINC01963-201ENST00000562038 TBC1D9Q6ZT07 1266 aa6.66□□□□□ -1.34
LINC01963-201ENST00000562038 ANKLE1Q8NAG6 615 aa6.66□□□□□ -1.34
LINC01963-201ENST00000562038 FBXW7Q969H0 707 aa6.66□□□□□ -1.34
LINC01963-201ENST00000562038 XPO5Q9HAV4 1204 aaKnown RBP eCLIP6.66□□□□□ -1.34
LINC01963-201ENST00000562038 MAP3K20Q9NYL2 800 aaKnown RBP6.66□□□□□ -1.34
LINC01963-201ENST00000562038 NRBP1Q9UHY1 535 aa6.66□□□□□ -1.34
LINC01963-201ENST00000562038 TSKSQ9UJT2 592 aa6.66□□□□□ -1.34
LINC01963-201ENST00000562038 AGTPBP1Q9UPW5 1226 aa6.66□□□□□ -1.34
LINC01963-201ENST00000562038 hCG_1984214I3L0E3 225 aa6.65□□□□□ -1.34
LINC01963-201ENST00000562038 RBM5P52756 815 aaKnown RBP eCLIP6.65□□□□□ -1.34
LINC01963-201ENST00000562038 VGLL4Q14135 290 aa6.65□□□□□ -1.34
LINC01963-201ENST00000562038 IMMTQ16891 758 aaKnown RBP6.65□□□□□ -1.34
LINC01963-201ENST00000562038 AKNAD1Q5T1N1 836 aa6.65□□□□□ -1.34
LINC01963-201ENST00000562038 NBPF12Q5TAG4 269 aaPredicted RBP6.65□□□□□ -1.34
LINC01963-201ENST00000562038 ABRAQ8N0Z2 381 aa6.65□□□□□ -1.34
LINC01963-201ENST00000562038 ZNF713Q8N859 430 aaPredicted RBP6.65□□□□□ -1.34
LINC01963-201ENST00000562038 TMEM87BQ96K49 555 aa6.65□□□□□ -1.34
LINC01963-201ENST00000562038 LZTS2Q9BRK4 669 aa6.65□□□□□ -1.34
LINC01963-201ENST00000562038 ARHGEF10LQ9HCE6 1279 aa6.65□□□□□ -1.34
LINC01963-201ENST00000562038 RASA1P20936 1047 aa6.65□□□□□ -1.34
LINC01963-201ENST00000562038 HSPA4P34932 840 aa6.65□□□□□ -1.34
LINC01963-201ENST00000562038 CDK8P49336 464 aa6.65□□□□□ -1.34
LINC01963-201ENST00000562038 RBM26Q5T8P6 1007 aaKnown RBP6.65□□□□□ -1.34
LINC01963-201ENST00000562038 FAM160B2Q86V87 743 aa6.65□□□□□ -1.34
LINC01963-201ENST00000562038 MSL3Q8N5Y2 521 aaKnown RBP6.65□□□□□ -1.34
LINC01963-201ENST00000562038 ZNF280CQ8ND82 737 aa6.65□□□□□ -1.34
LINC01963-201ENST00000562038 TGFBRAP1Q8WUH2 860 aa6.65□□□□□ -1.34
LINC01963-201ENST00000562038 TMEM39BQ9GZU3 492 aa6.65□□□□□ -1.34
LINC01963-201ENST00000562038 NAPBQ9H115 298 aa6.65□□□□□ -1.34
LINC01963-201ENST00000562038 ARMT1Q9H993 441 aa6.65□□□□□ -1.34
LINC01963-201ENST00000562038 PICK1Q9NRD5 415 aa6.65□□□□□ -1.34
LINC01963-201ENST00000562038 CLEC11AQ9Y240 323 aa6.65□□□□□ -1.34
LINC01963-201ENST00000562038 KMT2EQ8IZD2 1858 aa6.65□□□□□ -1.34
LINC01963-201ENST00000562038 DDAH1O94760 285 aa6.65□□□□□ -1.35
LINC01963-201ENST00000562038 IGHA2P01877 340 aa6.65□□□□□ -1.35
LINC01963-201ENST00000562038 GUCY1A2P33402 732 aa6.65□□□□□ -1.35
LINC01963-201ENST00000562038 LIFRP42702 1097 aa6.65□□□□□ -1.35
LINC01963-201ENST00000562038 DYNLL1P63167 89 aaKnown RBP6.65□□□□□ -1.35
LINC01963-201ENST00000562038 SGMS1Q86VZ5 419 aa6.65□□□□□ -1.35
LINC01963-201ENST00000562038 DEFB123Q8N688 67 aa6.65□□□□□ -1.35
LINC01963-201ENST00000562038 PARK7Q99497 189 aaKnown RBP6.65□□□□□ -1.35
LINC01963-201ENST00000562038 CABP5Q9NP86 173 aa6.65□□□□□ -1.35
LINC01963-201ENST00000562038 STK24Q9Y6E0 443 aa6.65□□□□□ -1.35
LINC01963-201ENST00000562038 PLXNA1Q9UIW2 1896 aa6.64□□□□□ -1.35
LINC01963-201ENST00000562038 ASTN2O75129 1339 aaPredicted RBP6.64□□□□□ -1.35
LINC01963-201ENST00000562038 CALM1P0DP23 149 aa6.64□□□□□ -1.35
LINC01963-201ENST00000562038 CALM2P0DP24 149 aa6.64□□□□□ -1.35
LINC01963-201ENST00000562038 CALM3P0DP25 149 aa6.64□□□□□ -1.35
LINC01963-201ENST00000562038 VASPP50552 380 aaPredicted RBP6.64□□□□□ -1.35
LINC01963-201ENST00000562038 BACE1P56817 501 aa6.64□□□□□ -1.35
LINC01963-201ENST00000562038 ABCB5Q2M3G0 1257 aa6.64□□□□□ -1.35
LINC01963-201ENST00000562038 ESR2Q92731 530 aa6.64□□□□□ -1.35
LINC01963-201ENST00000562038 VEZTQ9HBM0 779 aa6.64□□□□□ -1.35
LINC01963-201ENST00000562038 GOPCQ9HD26 462 aa6.64□□□□□ -1.35
LINC01963-201ENST00000562038 LCTP09848 1927 aa6.64□□□□□ -1.35
LINC01963-201ENST00000562038 TCP10L2B9ZVM9 353 aa6.64□□□□□ -1.35
LINC01963-201ENST00000562038 HOXC6P09630 235 aa6.64□□□□□ -1.35
LINC01963-201ENST00000562038 CERKLQ49MI3 558 aaPredicted RBP6.64□□□□□ -1.35
LINC01963-201ENST00000562038 MCTP2Q6DN12 878 aa6.64□□□□□ -1.35
LINC01963-201ENST00000562038 GPAT2Q6NUI2 795 aa6.64□□□□□ -1.35
LINC01963-201ENST00000562038 GPATCH11Q8N954 259 aa6.64□□□□□ -1.35
LINC01963-201ENST00000562038 COL26A1Q96A83 441 aa6.64□□□□□ -1.35
LINC01963-201ENST00000562038 TRIM34Q9BYJ4 488 aa6.64□□□□□ -1.35
LINC01963-201ENST00000562038 IQSEC3Q9UPP2 1182 aaPredicted RBP6.64□□□□□ -1.35
LINC01963-201ENST00000562038 TTLL1O95922 423 aa6.63□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms