RNA–Protein interactions for RNA: ENST00000557702.5

PABPN1-208, Transcript of poly(A) binding protein nuclear 1, human

TSL 2 BASIC

Gene PABPN1, Length 778 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PABPN1-208	ENST00000557702	DHX36	Q9H2U1	1008 aa	Known RBP	11.68	□□□□□ -0.54
PABPN1-208	ENST00000557702	MTCH2	Q9Y6C9	303 aa		11.68	□□□□□ -0.54
PABPN1-208	ENST00000557702	SMCHD1	A6NHR9	2005 aa		11.68	□□□□□ -0.54
PABPN1-208	ENST00000557702	MROH7	Q68CQ1	1323 aa		11.67	□□□□□ -0.54
PABPN1-208	ENST00000557702	ZBTB22	O15209	634 aa		11.67	□□□□□ -0.54
PABPN1-208	ENST00000557702	COBL	O75128	1261 aa		11.67	□□□□□ -0.54
PABPN1-208	ENST00000557702	GDF11	O95390	407 aa		11.67	□□□□□ -0.54
PABPN1-208	ENST00000557702	FGB	P02675	491 aa		11.67	□□□□□ -0.54
PABPN1-208	ENST00000557702	LDHC	P07864	332 aa		11.67	□□□□□ -0.54
PABPN1-208	ENST00000557702	ALAD	P13716	330 aa		11.67	□□□□□ -0.54
PABPN1-208	ENST00000557702	RABGGTB	P53611	331 aa		11.67	□□□□□ -0.54
PABPN1-208	ENST00000557702	ERICH6	Q7L0X2	663 aa		11.67	□□□□□ -0.54
PABPN1-208	ENST00000557702	FOXP4	Q8IVH2	680 aa	Predicted RBP	11.67	□□□□□ -0.54
PABPN1-208	ENST00000557702	FEZ1	Q99689	392 aa		11.67	□□□□□ -0.54
PABPN1-208	ENST00000557702	CD320	Q9NPF0	282 aa		11.67	□□□□□ -0.54
PABPN1-208	ENST00000557702	IL23A	Q9NPF7	189 aa		11.67	□□□□□ -0.54
PABPN1-208	ENST00000557702	CEP126	Q9P2H0	1117 aa		11.67	□□□□□ -0.54
PABPN1-208	ENST00000557702	NRBP1	Q9UHY1	535 aa		11.67	□□□□□ -0.54
PABPN1-208	ENST00000557702	ZBTB21	Q9ULJ3	1066 aa		11.67	□□□□□ -0.54
PABPN1-208	ENST00000557702	ACLY	P53396	1101 aa		11.66	□□□□□ -0.54
PABPN1-208	ENST00000557702	USP14	P54578	494 aa		11.66	□□□□□ -0.54
PABPN1-208	ENST00000557702	GSTO1	P78417	241 aa		11.66	□□□□□ -0.54
PABPN1-208	ENST00000557702	RASGRF1	Q13972	1273 aa		11.66	□□□□□ -0.54
PABPN1-208	ENST00000557702	ZYX	Q15942	572 aa	Known RBP	11.66	□□□□□ -0.54
PABPN1-208	ENST00000557702	SHROOM1	Q2M3G4	852 aa	Predicted RBP	11.66	□□□□□ -0.54
PABPN1-208	ENST00000557702	CRACR2B	Q8N4Y2	399 aa	Predicted RBP	11.66	□□□□□ -0.54
PABPN1-208	ENST00000557702	MOV10L1	Q9BXT6	1211 aa	Known RBP	11.66	□□□□□ -0.54
PABPN1-208	ENST00000557702	PPP1R12C	Q9BZL4	782 aa		11.66	□□□□□ -0.54
PABPN1-208	ENST00000557702	PCDHA11	Q9Y5I1	949 aa		11.66	□□□□□ -0.54
PABPN1-208	ENST00000557702	MOXD2P	A6NHM9	499 aa		11.65	□□□□□ -0.54
PABPN1-208	ENST00000557702	SPDYE16	A6NNV3	312 aa	Predicted RBP	11.65	□□□□□ -0.54
PABPN1-208	ENST00000557702	RFXAP	O00287	272 aa		11.65	□□□□□ -0.54
PABPN1-208	ENST00000557702	ST18	O60284	1047 aa		11.65	□□□□□ -0.54
PABPN1-208	ENST00000557702	MYOG	P15173	224 aa		11.65	□□□□□ -0.54
PABPN1-208	ENST00000557702	VCAM1	P19320	739 aa		11.65	□□□□□ -0.54
PABPN1-208	ENST00000557702	CCDC102B	Q68D86	513 aa		11.65	□□□□□ -0.54
PABPN1-208	ENST00000557702	OTOP2	Q7RTS6	562 aa		11.65	□□□□□ -0.54
PABPN1-208	ENST00000557702	ATG9A	Q7Z3C6	839 aa		11.65	□□□□□ -0.54
PABPN1-208	ENST00000557702	TEX11	Q8IYF3	940 aa		11.65	□□□□□ -0.54
PABPN1-208	ENST00000557702	GJD3	Q8N144	294 aa		11.65	□□□□□ -0.54
PABPN1-208	ENST00000557702	MAML3	Q96JK9	1138 aa		11.65	□□□□□ -0.54
PABPN1-208	ENST00000557702	LRRC37A2	A6NM11	1700 aa		11.65	□□□□□ -0.54
PABPN1-208	ENST00000557702	ZDBF2	Q9HCK1	2354 aa		11.64	□□□□□ -0.55
PABPN1-208	ENST00000557702	PDS5A	Q29RF7	1337 aa	Known RBP	11.64	□□□□□ -0.55
PABPN1-208	ENST00000557702	ERCC3	P19447	782 aa		11.64	□□□□□ -0.55
PABPN1-208	ENST00000557702	CDK7	P50613	346 aa		11.64	□□□□□ -0.55
PABPN1-208	ENST00000557702	METTL16	Q86W50	562 aa	Known RBP	11.64	□□□□□ -0.55
PABPN1-208	ENST00000557702	ABRA	Q8N0Z2	381 aa		11.64	□□□□□ -0.55
PABPN1-208	ENST00000557702	SHCBP1	Q8NEM2	672 aa		11.64	□□□□□ -0.55
PABPN1-208	ENST00000557702	GLT1D1	Q96MS3	346 aa		11.64	□□□□□ -0.55
PABPN1-208	ENST00000557702	DNAJC18	Q9H819	358 aa		11.64	□□□□□ -0.55
PABPN1-208	ENST00000557702	SLC4A7	Q9Y6M7	1214 aa		11.64	□□□□□ -0.55
PABPN1-208	ENST00000557702	WDFY4	Q6ZS81	3184 aa		11.64	□□□□□ -0.55
PABPN1-208	ENST00000557702	ELP1	O95163	1332 aa		11.63	□□□□□ -0.55
PABPN1-208	ENST00000557702	IL16	Q14005	1332 aa		11.63	□□□□□ -0.55
PABPN1-208	ENST00000557702	TLR3	O15455	904 aa	Known RBP	11.63	□□□□□ -0.55
PABPN1-208	ENST00000557702	ADAMTS4	O75173	837 aa		11.63	□□□□□ -0.55
PABPN1-208	ENST00000557702	GH2	P01242	217 aa		11.63	□□□□□ -0.55
PABPN1-208	ENST00000557702	AKR1A1	P14550	325 aa		11.63	□□□□□ -0.55
PABPN1-208	ENST00000557702	SSTR3	P32745	418 aa	Predicted RBP	11.63	□□□□□ -0.55
PABPN1-208	ENST00000557702	RFX5	P48382	616 aa	Predicted RBP	11.63	□□□□□ -0.55
PABPN1-208	ENST00000557702	KCNA10	Q16322	511 aa		11.63	□□□□□ -0.55
PABPN1-208	ENST00000557702	CCDC27	Q2M243	656 aa		11.63	□□□□□ -0.55
PABPN1-208	ENST00000557702	KRT40	Q6A162	431 aa		11.63	□□□□□ -0.55
PABPN1-208	ENST00000557702	WWC1	Q8IX03	1113 aa		11.63	□□□□□ -0.55
PABPN1-208	ENST00000557702	ZNF384	Q8TF68	577 aa		11.63	□□□□□ -0.55
PABPN1-208	ENST00000557702	VTI1A	Q96AJ9	217 aa		11.63	□□□□□ -0.55
PABPN1-208	ENST00000557702	NOL10	Q9BSC4	688 aa	Known RBP	11.63	□□□□□ -0.55
PABPN1-208	ENST00000557702	SPATC1L	Q9H0A9	340 aa		11.63	□□□□□ -0.55
PABPN1-208	ENST00000557702	KIAA1683	Q9H0B3	1180 aa		11.63	□□□□□ -0.55
PABPN1-208	ENST00000557702	RPAP3	Q9H6T3	665 aa	Predicted RBP	11.63	□□□□□ -0.55
PABPN1-208	ENST00000557702	HOXC10	Q9NYD6	342 aa		11.63	□□□□□ -0.55
PABPN1-208	ENST00000557702	BRWD1	Q9NSI6	2320 aa		11.62	□□□□□ -0.55
PABPN1-208	ENST00000557702	ATP2A2	P16615	1042 aa	Known RBP	11.62	□□□□□ -0.55
PABPN1-208	ENST00000557702	ADORA1	P30542	326 aa		11.62	□□□□□ -0.55
PABPN1-208	ENST00000557702	CYP2C18	P33260	490 aa		11.62	□□□□□ -0.55
PABPN1-208	ENST00000557702	COG2	Q14746	738 aa		11.62	□□□□□ -0.55
PABPN1-208	ENST00000557702	TMEM67	Q5HYA8	995 aa		11.62	□□□□□ -0.55
PABPN1-208	ENST00000557702	NCAPG2	Q86XI2	1143 aa		11.62	□□□□□ -0.55
PABPN1-208	ENST00000557702	SH3RF3	Q8TEJ3	882 aa	Predicted RBP	11.62	□□□□□ -0.55
PABPN1-208	ENST00000557702	NSUN4	Q96CB9	384 aa	Known RBP	11.62	□□□□□ -0.55
PABPN1-208	ENST00000557702	MROH8	Q9H579	483 aa		11.62	□□□□□ -0.55
PABPN1-208	ENST00000557702	CERS4	Q9HA82	394 aa		11.62	□□□□□ -0.55
PABPN1-208	ENST00000557702	FBXO3	Q9UK99	471 aa		11.62	□□□□□ -0.55
PABPN1-208	ENST00000557702	FANCI	Q9NVI1	1328 aa		11.61	□□□□□ -0.55
PABPN1-208	ENST00000557702	ARVCF	O00192	962 aa		11.61	□□□□□ -0.55
PABPN1-208	ENST00000557702	CIAO1	O76071	339 aa		11.61	□□□□□ -0.55
PABPN1-208	ENST00000557702	CA3	P07451	260 aa		11.61	□□□□□ -0.55
PABPN1-208	ENST00000557702	FCER1A	P12319	257 aa		11.61	□□□□□ -0.55
PABPN1-208	ENST00000557702	PLS1	Q14651	629 aa		11.61	□□□□□ -0.55
PABPN1-208	ENST00000557702	CCSAP	Q6IQ19	270 aa	Predicted RBP	11.61	□□□□□ -0.55
PABPN1-208	ENST00000557702	ATF7IP	Q6VMQ6	1270 aa		11.61	□□□□□ -0.55
PABPN1-208	ENST00000557702	FAM178B	Q8IXR5	827 aa		11.61	□□□□□ -0.55
PABPN1-208	ENST00000557702	KLHDC9	Q8NEP7	349 aa		11.61	□□□□□ -0.55
PABPN1-208	ENST00000557702	LENG1	Q96BZ8	264 aa	Predicted RBP	11.61	□□□□□ -0.55
PABPN1-208	ENST00000557702	TINF2	Q9BSI4	451 aa		11.61	□□□□□ -0.55
PABPN1-208	ENST00000557702	SIL1	Q9H173	461 aa		11.61	□□□□□ -0.55
PABPN1-208	ENST00000557702	PALD1	Q9ULE6	856 aa		11.61	□□□□□ -0.55
PABPN1-208	ENST00000557702	ROBO3	Q96MS0	1386 aa		11.61	□□□□□ -0.55
PABPN1-208	ENST00000557702	ZNF236	Q9UL36	1845 aa		11.6	□□□□□ -0.55

Retrieved 100 of 20,778 RNA–protein pairs in 142.6 ms