RNA–Protein interactions for RNA: ENST00000557446.5

HIF1A-211, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 5

Gene HIF1A, Length 559 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-211ENST00000557446 KIAA1755Q5JYT7 1200 aa23.46■■□□□ 1.35
HIF1A-211ENST00000557446 CATSPERGQ6ZRH7 1159 aa23.46■■□□□ 1.35
HIF1A-211ENST00000557446 LPAR1Q92633 364 aa23.46■■□□□ 1.35
HIF1A-211ENST00000557446 A0A0G2JMZ2 1700 aa23.45■■□□□ 1.34
HIF1A-211ENST00000557446 CCDC85CA6NKD9 419 aa23.45■■□□□ 1.34
HIF1A-211ENST00000557446 CHMLP26374 656 aa23.45■■□□□ 1.34
HIF1A-211ENST00000557446 HAND2P61296 217 aa23.45■■□□□ 1.34
HIF1A-211ENST00000557446 FAM47AQ5JRC9 791 aa23.45■■□□□ 1.34
HIF1A-211ENST00000557446 SPICE1Q8N0Z3 855 aa23.45■■□□□ 1.34
HIF1A-211ENST00000557446 NEDD1Q8NHV4 660 aa23.45■■□□□ 1.34
HIF1A-211ENST00000557446 GTF3C2Q8WUA4 911 aaPredicted RBP23.45■■□□□ 1.34
HIF1A-211ENST00000557446 TANGO6Q9C0B7 1094 aa23.45■■□□□ 1.34
HIF1A-211ENST00000557446 INCENPQ9NQS7 918 aa23.45■■□□□ 1.34
HIF1A-211ENST00000557446 NYAP2Q9P242 653 aa23.45■■□□□ 1.34
HIF1A-211ENST00000557446 MORF4L1Q9UBU8 362 aa23.45■■□□□ 1.34
HIF1A-211ENST00000557446 TACC3Q9Y6A5 838 aa23.45■■□□□ 1.34
HIF1A-211ENST00000557446 RLFQ13129 1914 aa23.45■■□□□ 1.34
HIF1A-211ENST00000557446 TSPY2A6NKD2 308 aa23.44■■□□□ 1.34
HIF1A-211ENST00000557446 TFAP4Q01664 338 aa23.44■■□□□ 1.34
HIF1A-211ENST00000557446 RUFY2Q8WXA3 655 aa23.44■■□□□ 1.34
HIF1A-211ENST00000557446 CEP95Q96GE4 821 aa23.44■■□□□ 1.34
HIF1A-211ENST00000557446 DSCC1Q9BVC3 393 aa23.44■■□□□ 1.34
HIF1A-211ENST00000557446 GOPCQ9HD26 462 aa23.44■■□□□ 1.34
HIF1A-211ENST00000557446 TXNRD2Q9NNW7 524 aa23.44■■□□□ 1.34
HIF1A-211ENST00000557446 PTCH2Q9Y6C5 1203 aa23.44■■□□□ 1.34
HIF1A-211ENST00000557446 WDR46O15213 610 aaKnown RBP23.43■■□□□ 1.34
HIF1A-211ENST00000557446 ORC4O43929 436 aa23.43■■□□□ 1.34
HIF1A-211ENST00000557446 RAD21O60216 631 aa23.43■■□□□ 1.34
HIF1A-211ENST00000557446 HOXD10P28358 340 aa23.43■■□□□ 1.34
HIF1A-211ENST00000557446 PAGR1Q9BTK6 254 aa23.43■■□□□ 1.34
HIF1A-211ENST00000557446 TOMM22Q9NS69 142 aa23.43■■□□□ 1.34
HIF1A-211ENST00000557446 MYPNQ86TC9 1320 aa23.42■■□□□ 1.34
HIF1A-211ENST00000557446 TNPO2O14787 897 aaKnown RBP23.42■■□□□ 1.34
HIF1A-211ENST00000557446 RANBP6O60518 1105 aaKnown RBP23.42■■□□□ 1.34
HIF1A-211ENST00000557446 PEX10O60683 326 aa23.42■■□□□ 1.34
HIF1A-211ENST00000557446 PRMT2P55345 433 aa23.42■■□□□ 1.34
HIF1A-211ENST00000557446 TBC1D10CQ8IV04 446 aa23.42■■□□□ 1.34
HIF1A-211ENST00000557446 NBPF3Q9H094 633 aa23.42■■□□□ 1.34
HIF1A-211ENST00000557446 MTMR4Q9NYA4 1195 aa23.42■■□□□ 1.34
HIF1A-211ENST00000557446 SRRDQ9UH36 339 aa23.42■■□□□ 1.34
HIF1A-211ENST00000557446 SPDYE16A6NNV3 312 aaPredicted RBP23.41■■□□□ 1.34
HIF1A-211ENST00000557446 TTLL1O95922 423 aa23.41■■□□□ 1.34
HIF1A-211ENST00000557446 FGRP09769 529 aa23.41■■□□□ 1.34
HIF1A-211ENST00000557446 RRP12Q5JTH9 1297 aaKnown RBP23.41■■□□□ 1.34
HIF1A-211ENST00000557446 GPRC5AQ8NFJ5 357 aa23.41■■□□□ 1.34
HIF1A-211ENST00000557446 RBPJLQ9UBG7 517 aa23.41■■□□□ 1.34
HIF1A-211ENST00000557446 CLIP2Q9UDT6 1046 aa23.41■■□□□ 1.34
HIF1A-211ENST00000557446 ZNF213O14771 459 aa23.4■■□□□ 1.34
HIF1A-211ENST00000557446 ERVK-9P63128 1117 aa23.4■■□□□ 1.34
HIF1A-211ENST00000557446 ERVK-24P63145 666 aa23.4■■□□□ 1.34
HIF1A-211ENST00000557446 PRKCZQ05513 592 aa23.4■■□□□ 1.34
HIF1A-211ENST00000557446 AKNAD1Q5T1N1 836 aa23.4■■□□□ 1.34
HIF1A-211ENST00000557446 POTEEQ6S8J3 1075 aa23.4■■□□□ 1.34
HIF1A-211ENST00000557446 LBX2Q6XYB7 198 aa23.4■■□□□ 1.34
HIF1A-211ENST00000557446 LRRC47Q8N1G4 583 aaKnown RBP23.4■■□□□ 1.34
HIF1A-211ENST00000557446 STAG1Q8WVM7 1258 aa23.4■■□□□ 1.34
HIF1A-211ENST00000557446 DOCK3Q8IZD9 2030 aa23.4■■□□□ 1.34
HIF1A-211ENST00000557446 COL11A1P12107 1806 aaPredicted RBP23.39■■□□□ 1.33
HIF1A-211ENST00000557446 FLOT1O75955 427 aa23.39■■□□□ 1.33
HIF1A-211ENST00000557446 PCP11498 1178 aaKnown RBP23.39■■□□□ 1.33
HIF1A-211ENST00000557446 COG2Q14746 738 aa23.39■■□□□ 1.33
HIF1A-211ENST00000557446 BMP2KLQ5H9B9 411 aa23.39■■□□□ 1.33
HIF1A-211ENST00000557446 MFSD6Q6ZSS7 791 aa23.39■■□□□ 1.33
HIF1A-211ENST00000557446 RNF41Q9H4P4 317 aaPredicted RBP23.39■■□□□ 1.33
HIF1A-211ENST00000557446 RABGAP1Q9Y3P9 1069 aa23.39■■□□□ 1.33
HIF1A-211ENST00000557446 SLC9C1Q4G0N8 1177 aa23.38■■□□□ 1.33
HIF1A-211ENST00000557446 PPP4R3BQ5MIZ7 849 aa23.38■■□□□ 1.33
HIF1A-211ENST00000557446 FAM83BQ5T0W9 1011 aa23.38■■□□□ 1.33
HIF1A-211ENST00000557446 RAET1EQ8TD07 263 aa23.38■■□□□ 1.33
HIF1A-211ENST00000557446 COA7Q96BR5 231 aa23.38■■□□□ 1.33
HIF1A-211ENST00000557446 CTNNA3Q9UI47 895 aa23.38■■□□□ 1.33
HIF1A-211ENST00000557446 SYNPO2Q9UMS6 1093 aa23.38■■□□□ 1.33
HIF1A-211ENST00000557446 GABRQQ9UN88 632 aa23.38■■□□□ 1.33
HIF1A-211ENST00000557446 PLXNB2O15031 1838 aa23.38■■□□□ 1.33
HIF1A-211ENST00000557446 NEDD4P46934 1319 aa23.37■■□□□ 1.33
HIF1A-211ENST00000557446 F5H6K3 240 aa23.37■■□□□ 1.33
HIF1A-211ENST00000557446 SGSM2O43147 1006 aa23.37■■□□□ 1.33
HIF1A-211ENST00000557446 NMT2O60551 498 aa23.37■■□□□ 1.33
HIF1A-211ENST00000557446 CNMDO75829 334 aa23.37■■□□□ 1.33
HIF1A-211ENST00000557446 NDUFB10O96000 172 aa23.37■■□□□ 1.33
HIF1A-211ENST00000557446 KLRC3Q07444 240 aa23.37■■□□□ 1.33
HIF1A-211ENST00000557446 IMMTQ16891 758 aaKnown RBP23.37■■□□□ 1.33
HIF1A-211ENST00000557446 Q3C1V9 767 aa23.37■■□□□ 1.33
HIF1A-211ENST00000557446 SAMD1Q6SPF0 538 aaPredicted RBP23.37■■□□□ 1.33
HIF1A-211ENST00000557446 MKL1Q969V6 931 aa23.37■■□□□ 1.33
HIF1A-211ENST00000557446 IL17RBQ9NRM6 502 aa23.37■■□□□ 1.33
HIF1A-211ENST00000557446 HOXC10Q9NYD6 342 aa23.37■■□□□ 1.33
HIF1A-211ENST00000557446 STX8Q9UNK0 236 aa23.37■■□□□ 1.33
HIF1A-211ENST00000557446 DSG3P32926 999 aa23.36■■□□□ 1.33
HIF1A-211ENST00000557446 NUP88Q99567 741 aaPredicted RBP23.36■■□□□ 1.33
HIF1A-211ENST00000557446 PORCNQ9H237 461 aa23.36■■□□□ 1.33
HIF1A-211ENST00000557446 BTBD7Q9P203 1132 aa23.36■■□□□ 1.33
HIF1A-211ENST00000557446 HTTP42858 3142 aa23.36■■□□□ 1.33
HIF1A-211ENST00000557446 FLT3LGP49771 235 aa23.35■■□□□ 1.33
HIF1A-211ENST00000557446 CCNA1P78396 465 aa23.35■■□□□ 1.33
HIF1A-211ENST00000557446 ERICH6BQ5W0A0 696 aa23.35■■□□□ 1.33
HIF1A-211ENST00000557446 CCAR1Q8IX12 1150 aaKnown RBP23.35■■□□□ 1.33
HIF1A-211ENST00000557446 GMCL1P1Q8NEA9 526 aa23.35■■□□□ 1.33
HIF1A-211ENST00000557446 ARMC5Q96C12 935 aa23.35■■□□□ 1.33
HIF1A-211ENST00000557446 ATG4CQ96DT6 458 aa23.35■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms