RNA–Protein interactions for RNA: ENST00000557389.1

NFKBIA-209, Transcript of NFKB inhibitor alpha, human

TSL 2 BASIC

Gene NFKBIA, Length 1,537 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NFKBIA-209	ENST00000557389	ARHGEF10L	Q9HCE6	1279 aa		32.83	■■■□□ 2.85
NFKBIA-209	ENST00000557389	PICK1	Q9NRD5	415 aa		32.83	■■■□□ 2.85
NFKBIA-209	ENST00000557389	CALM1	P0DP23	149 aa		32.82	■■■□□ 2.85
NFKBIA-209	ENST00000557389	CALM2	P0DP24	149 aa		32.82	■■■□□ 2.85
NFKBIA-209	ENST00000557389	CALM3	P0DP25	149 aa		32.82	■■■□□ 2.85
NFKBIA-209	ENST00000557389	CDC27	P30260	824 aa		32.82	■■■□□ 2.85
NFKBIA-209	ENST00000557389	ACER1	Q8TDN7	264 aa		32.82	■■■□□ 2.85
NFKBIA-209	ENST00000557389		A0A1W2PRG0	241 aa		32.82	■■■□□ 2.84
NFKBIA-209	ENST00000557389	ECE1	P42892	770 aa		32.82	■■■□□ 2.84
NFKBIA-209	ENST00000557389	MAP3K9	P80192	1104 aa		32.82	■■■□□ 2.84
NFKBIA-209	ENST00000557389	FANCB	Q8NB91	859 aa		32.82	■■■□□ 2.84
NFKBIA-209	ENST00000557389	GINM1	Q9NU53	330 aa		32.82	■■■□□ 2.84
NFKBIA-209	ENST00000557389	TRPM7	Q96QT4	1865 aa		32.82	■■■□□ 2.84
NFKBIA-209	ENST00000557389	NID2	Q14112	1375 aa		32.81	■■■□□ 2.84
NFKBIA-209	ENST00000557389	ADD1	P35611	737 aa	Known RBP	32.81	■■■□□ 2.84
NFKBIA-209	ENST00000557389	VGLL4	Q14135	290 aa		32.81	■■■□□ 2.84
NFKBIA-209	ENST00000557389	PPP1R3F	Q6ZSY5	799 aa	Predicted RBP	32.81	■■■□□ 2.84
NFKBIA-209	ENST00000557389	KIF3C	O14782	793 aa		32.8	■■■□□ 2.84
NFKBIA-209	ENST00000557389	PPFIA3	O75145	1194 aa		32.8	■■■□□ 2.84
NFKBIA-209	ENST00000557389	RCAN1	P53805	252 aa		32.8	■■■□□ 2.84
NFKBIA-209	ENST00000557389	ARMC9	Q7Z3E5	817 aa		32.8	■■■□□ 2.84
NFKBIA-209	ENST00000557389	CTCFL	Q8NI51	663 aa	Predicted RBP	32.8	■■■□□ 2.84
NFKBIA-209	ENST00000557389	MKL1	Q969V6	931 aa		32.8	■■■□□ 2.84
NFKBIA-209	ENST00000557389	CSAD	Q9Y600	493 aa		32.8	■■■□□ 2.84
NFKBIA-209	ENST00000557389	USP17L5	A8MUK1	530 aa		32.79	■■■□□ 2.84
NFKBIA-209	ENST00000557389	NOL9	Q5SY16	702 aa	Known RBP	32.79	■■■□□ 2.84
NFKBIA-209	ENST00000557389	FAM217B	Q9NTX9	383 aa	Predicted RBP	32.79	■■■□□ 2.84
NFKBIA-209	ENST00000557389	CPLX1	O14810	134 aa		32.78	■■■□□ 2.84
NFKBIA-209	ENST00000557389	ZYX	Q15942	572 aa	Known RBP	32.78	■■■□□ 2.84
NFKBIA-209	ENST00000557389	ZSCAN21	Q9Y5A6	473 aa	Predicted RBP	32.78	■■■□□ 2.84
NFKBIA-209	ENST00000557389	SNCAIP	Q9Y6H5	919 aa		32.78	■■■□□ 2.84
NFKBIA-209	ENST00000557389	PTPRA	P18433	802 aa		32.77	■■■□□ 2.84
NFKBIA-209	ENST00000557389	GRM4	Q14833	912 aa		32.77	■■■□□ 2.84
NFKBIA-209	ENST00000557389	CMTR1	Q8N1G2	835 aa	Known RBP	32.77	■■■□□ 2.84
NFKBIA-209	ENST00000557389	FEZ1	Q99689	392 aa		32.77	■■■□□ 2.84
NFKBIA-209	ENST00000557389	UBE2Q2L	H0YL09	131 aa		32.77	■■■□□ 2.84
NFKBIA-209	ENST00000557389	JAK2	O60674	1132 aa		32.77	■■■□□ 2.84
NFKBIA-209	ENST00000557389	CELF2	O95319	508 aa	Known RBP	32.77	■■■□□ 2.84
NFKBIA-209	ENST00000557389	CTDNEP1	O95476	244 aa		32.77	■■■□□ 2.84
NFKBIA-209	ENST00000557389	ITGBL1	O95965	494 aa	Predicted RBP	32.77	■■■□□ 2.84
NFKBIA-209	ENST00000557389	USP17L2	Q6R6M4	530 aa		32.77	■■■□□ 2.84
NFKBIA-209	ENST00000557389	INTS4	Q96HW7	963 aa	Known RBP	32.77	■■■□□ 2.84
NFKBIA-209	ENST00000557389	CLMN	Q96JQ2	1002 aa		32.77	■■■□□ 2.84
NFKBIA-209	ENST00000557389	FRMPD2	Q68DX3	1309 aa	Predicted RBP	32.76	■■■□□ 2.83
NFKBIA-209	ENST00000557389	DHX16	O60231	1041 aa	Known RBP	32.76	■■■□□ 2.83
NFKBIA-209	ENST00000557389	GOLGA8H	P0CJ92	632 aa		32.76	■■■□□ 2.83
NFKBIA-209	ENST00000557389	PDHB	P11177	359 aa		32.76	■■■□□ 2.83
NFKBIA-209	ENST00000557389	MAP3K11	Q16584	847 aa		32.76	■■■□□ 2.83
NFKBIA-209	ENST00000557389	ANKRD13A	Q8IZ07	590 aa		32.76	■■■□□ 2.83
NFKBIA-209	ENST00000557389	NSUN7	Q8NE18	718 aa	Known RBP	32.76	■■■□□ 2.83
NFKBIA-209	ENST00000557389	ELP3	Q9H9T3	547 aa		32.76	■■■□□ 2.83
NFKBIA-209	ENST00000557389	RBM28	Q9NW13	759 aa	Known RBP	32.76	■■■□□ 2.83
NFKBIA-209	ENST00000557389	ISY1	Q9ULR0	285 aa	Known RBP	32.76	■■■□□ 2.83
NFKBIA-209	ENST00000557389	SMC3	Q9UQE7	1217 aa		32.76	■■■□□ 2.83
NFKBIA-209	ENST00000557389	TMX2	Q9Y320	296 aa		32.76	■■■□□ 2.83
NFKBIA-209	ENST00000557389	MYH6	P13533	1939 aa		32.75	■■■□□ 2.83
NFKBIA-209	ENST00000557389	PLEKHA8P1	O95397	391 aa		32.75	■■■□□ 2.83
NFKBIA-209	ENST00000557389	CCDC96	Q2M329	555 aa		32.75	■■■□□ 2.83
NFKBIA-209	ENST00000557389	SLFN13	Q68D06	897 aa		32.75	■■■□□ 2.83
NFKBIA-209	ENST00000557389	STAG2	Q8N3U4	1231 aa		32.75	■■■□□ 2.83
NFKBIA-209	ENST00000557389	SH2D4A	Q9H788	454 aa		32.75	■■■□□ 2.83
NFKBIA-209	ENST00000557389	CCDC196	A0A1B0GTZ2	297 aa		32.74	■■■□□ 2.83
NFKBIA-209	ENST00000557389	PTPDC1	A2A3K4	754 aa		32.74	■■■□□ 2.83
NFKBIA-209	ENST00000557389		F5H6K3	240 aa		32.74	■■■□□ 2.83
NFKBIA-209	ENST00000557389	PARP1	P09874	1014 aa	Known RBP	32.74	■■■□□ 2.83
NFKBIA-209	ENST00000557389	KIF5B	P33176	963 aa		32.74	■■■□□ 2.83
NFKBIA-209	ENST00000557389	KLRC3	Q07444	240 aa		32.74	■■■□□ 2.83
NFKBIA-209	ENST00000557389	CCDC82	Q8N4S0	544 aa		32.74	■■■□□ 2.83
NFKBIA-209	ENST00000557389	DDX11	Q96FC9	970 aa		32.74	■■■□□ 2.83
NFKBIA-209	ENST00000557389	AS3MT	Q9HBK9	375 aa		32.74	■■■□□ 2.83
NFKBIA-209	ENST00000557389	GBA2	Q9HCG7	927 aa	Predicted RBP	32.74	■■■□□ 2.83
NFKBIA-209	ENST00000557389	MAD2L2	Q9UI95	211 aa		32.74	■■■□□ 2.83
NFKBIA-209	ENST00000557389	ZHX2	Q9Y6X8	837 aa		32.74	■■■□□ 2.83
NFKBIA-209	ENST00000557389	NDUFB10	O96000	172 aa		32.73	■■■□□ 2.83
NFKBIA-209	ENST00000557389	CPLX2	Q6PUV4	134 aa	Known RBP	32.73	■■■□□ 2.83
NFKBIA-209	ENST00000557389	SPICE1	Q8N0Z3	855 aa		32.73	■■■□□ 2.83
NFKBIA-209	ENST00000557389	GMCL1P1	Q8NEA9	526 aa		32.73	■■■□□ 2.83
NFKBIA-209	ENST00000557389	MAP3K14	Q99558	947 aa		32.73	■■■□□ 2.83
NFKBIA-209	ENST00000557389	GOPC	Q9HD26	462 aa		32.73	■■■□□ 2.83
NFKBIA-209	ENST00000557389	SPP2	Q13103	211 aa		32.72	■■■□□ 2.83
NFKBIA-209	ENST00000557389	CNKSR2	Q8WXI2	1034 aa		32.72	■■■□□ 2.83
NFKBIA-209	ENST00000557389	PHKB	Q93100	1093 aa		32.72	■■■□□ 2.83
NFKBIA-209	ENST00000557389	LLPH	Q9BRT6	129 aa	Known RBP	32.72	■■■□□ 2.83
NFKBIA-209	ENST00000557389	GJB2	P29033	226 aa		32.72	■■■□□ 2.83
NFKBIA-209	ENST00000557389	PPP2R5B	Q15173	497 aa		32.72	■■■□□ 2.83
NFKBIA-209	ENST00000557389	KIAA1755	Q5JYT7	1200 aa		32.72	■■■□□ 2.83
NFKBIA-209	ENST00000557389	TMTC3	Q6ZXV5	915 aa		32.72	■■■□□ 2.83
NFKBIA-209	ENST00000557389	NUP88	Q99567	741 aa	Predicted RBP	32.72	■■■□□ 2.83
NFKBIA-209	ENST00000557389	GPCPD1	Q9NPB8	672 aa		32.72	■■■□□ 2.83
NFKBIA-209	ENST00000557389	TRIM75P	A6NK02	468 aa		32.71	■■■□□ 2.83
NFKBIA-209	ENST00000557389	MTMR2	Q13614	643 aa		32.71	■■■□□ 2.83
NFKBIA-209	ENST00000557389	NTRK3	Q16288	839 aa		32.71	■■■□□ 2.83
NFKBIA-209	ENST00000557389	KCTD1	Q719H9	257 aa		32.71	■■■□□ 2.83
NFKBIA-209	ENST00000557389	ZNF280C	Q8ND82	737 aa		32.71	■■■□□ 2.83
NFKBIA-209	ENST00000557389	WDR18	Q9BV38	432 aa		32.71	■■■□□ 2.83
NFKBIA-209	ENST00000557389	VCPKMT	Q9H867	229 aa		32.71	■■■□□ 2.83
NFKBIA-209	ENST00000557389	SYNPO2	Q9UMS6	1093 aa		32.71	■■■□□ 2.83
NFKBIA-209	ENST00000557389	PALM3	A6NDB9	673 aa	Predicted RBP	32.7	■■■□□ 2.83
NFKBIA-209	ENST00000557389	CDKL5	O76039	1030 aa		32.7	■■■□□ 2.83
NFKBIA-209	ENST00000557389	SNHG28	P0DPA3	235 aa		32.7	■■■□□ 2.83

Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms