RNA–Protein interactions for RNA: ENST00000555746.5

SRP54-209, Transcript of signal recognition particle 54, humanhuman

TSL 4

Gene SRP54, Length 558 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-209ENST00000555746 SHISA5Q8N114 240 aa5.16□□□□□ -1.58
SRP54-209ENST00000555746 CELF2-AS1Q8N7Q2 184 aa5.16□□□□□ -1.58
SRP54-209ENST00000555746 PMFBP1Q8TBY8 1022 aa5.16□□□□□ -1.58
SRP54-209ENST00000555746 RNF141Q8WVD5 230 aa5.16□□□□□ -1.58
SRP54-209ENST00000555746 MFSD14AQ96MC6 490 aa5.16□□□□□ -1.58
SRP54-209ENST00000555746 KREMEN1Q96MU8 473 aa5.16□□□□□ -1.58
SRP54-209ENST00000555746 METTL22Q9BUU2 404 aaPredicted RBP5.16□□□□□ -1.58
SRP54-209ENST00000555746 ASPNQ9BXN1 380 aa5.16□□□□□ -1.58
SRP54-209ENST00000555746 TRIM55Q9BYV6 548 aa5.16□□□□□ -1.58
SRP54-209ENST00000555746 CNTNAP4Q9C0A0 1308 aa5.16□□□□□ -1.58
SRP54-209ENST00000555746 NCAPD3P42695 1498 aa5.15□□□□□ -1.58
SRP54-209ENST00000555746 FAM170BA6NMN3 283 aa5.15□□□□□ -1.59
SRP54-209ENST00000555746 ZNF865P0CJ78 1059 aaPredicted RBP5.15□□□□□ -1.59
SRP54-209ENST00000555746 CYP7A1P22680 504 aa5.15□□□□□ -1.59
SRP54-209ENST00000555746 RNF4P78317 190 aa5.15□□□□□ -1.59
SRP54-209ENST00000555746 NCAPHQ15003 741 aa5.15□□□□□ -1.59
SRP54-209ENST00000555746 NBPF12Q5TAG4 269 aaPredicted RBP5.15□□□□□ -1.59
SRP54-209ENST00000555746 GPAT2Q6NUI2 795 aa5.15□□□□□ -1.59
SRP54-209ENST00000555746 ZNF765Q7L2R6 523 aa5.15□□□□□ -1.59
SRP54-209ENST00000555746 LRP10Q7Z4F1 713 aa5.15□□□□□ -1.59
SRP54-209ENST00000555746 PPFIBP1Q86W92 1011 aa5.15□□□□□ -1.59
SRP54-209ENST00000555746 KLHL6Q8WZ60 621 aa5.15□□□□□ -1.59
SRP54-209ENST00000555746 HEXIM2Q96MH2 286 aaKnown RBP5.15□□□□□ -1.59
SRP54-209ENST00000555746 CCDC113Q9H0I3 377 aa5.15□□□□□ -1.59
SRP54-209ENST00000555746 OSBPL2Q9H1P3 480 aa5.15□□□□□ -1.59
SRP54-209ENST00000555746 MKNK2Q9HBH9 465 aa5.15□□□□□ -1.59
SRP54-209ENST00000555746 PRDM5Q9NQX1 630 aaPredicted RBP5.15□□□□□ -1.59
SRP54-209ENST00000555746 GTF2IRD1Q9UHL9 959 aa5.15□□□□□ -1.59
SRP54-209ENST00000555746 SYNJ2O15056 1496 aa5.14□□□□□ -1.59
SRP54-209ENST00000555746 LAMC3Q9Y6N6 1575 aa5.14□□□□□ -1.59
SRP54-209ENST00000555746 U2SURPO15042 1029 aaKnown RBP5.14□□□□□ -1.59
SRP54-209ENST00000555746 KIR3DL1P43629 444 aa5.14□□□□□ -1.59
SRP54-209ENST00000555746 SLC7A5Q01650 507 aa5.14□□□□□ -1.59
SRP54-209ENST00000555746 ANKRD39Q53RE8 183 aa5.14□□□□□ -1.59
SRP54-209ENST00000555746 SFRP5Q5T4F7 317 aa5.14□□□□□ -1.59
SRP54-209ENST00000555746 DUSP27Q5VZP5 1158 aa5.14□□□□□ -1.59
SRP54-209ENST00000555746 LARP1BQ659C4 914 aaKnown RBP5.14□□□□□ -1.59
SRP54-209ENST00000555746 VHLLQ6RSH7 139 aa5.14□□□□□ -1.59
SRP54-209ENST00000555746 ZDHHC13Q8IUH4 622 aa5.14□□□□□ -1.59
SRP54-209ENST00000555746 FAM178BQ8IXR5 827 aa5.14□□□□□ -1.59
SRP54-209ENST00000555746 FBXL6Q8N531 539 aa5.14□□□□□ -1.59
SRP54-209ENST00000555746 SHKBP1Q8TBC3 707 aa5.14□□□□□ -1.59
SRP54-209ENST00000555746 MICAL1Q8TDZ2 1067 aa5.14□□□□□ -1.59
SRP54-209ENST00000555746 TPX2Q9ULW0 747 aaKnown RBP5.14□□□□□ -1.59
SRP54-209ENST00000555746 SCRIBQ14160 1630 aa5.14□□□□□ -1.59
SRP54-209ENST00000555746 PDS5BQ9NTI5 1447 aa5.14□□□□□ -1.59
SRP54-209ENST00000555746 WDR62O43379 1518 aa5.13□□□□□ -1.59
SRP54-209ENST00000555746 FAM86C2PA6NEL3 165 aa5.13□□□□□ -1.59
SRP54-209ENST00000555746 WDR64B1ANS9 1081 aa5.13□□□□□ -1.59
SRP54-209ENST00000555746 C9IYK1 514 aa5.13□□□□□ -1.59
SRP54-209ENST00000555746 GJB6O95452 261 aa5.13□□□□□ -1.59
SRP54-209ENST00000555746 ZNF143P52747 638 aaPredicted RBP5.13□□□□□ -1.59
SRP54-209ENST00000555746 RASA3Q14644 834 aa5.13□□□□□ -1.59
SRP54-209ENST00000555746 NFE2L2Q16236 605 aa5.13□□□□□ -1.59
SRP54-209ENST00000555746 CCDC144BQ3MJ40 725 aa5.13□□□□□ -1.59
SRP54-209ENST00000555746 C6orf15Q6UXA7 325 aaPredicted RBP5.13□□□□□ -1.59
SRP54-209ENST00000555746 Q96M66 194 aa5.13□□□□□ -1.59
SRP54-209ENST00000555746 OSBPL1AQ9BXW6 950 aa5.13□□□□□ -1.59
SRP54-209ENST00000555746 SPATA31D1Q6ZQQ2 1576 aa5.12□□□□□ -1.59
SRP54-209ENST00000555746 PRR19A6NJB7 356 aa5.12□□□□□ -1.59
SRP54-209ENST00000555746 B2RBV5 119 aa5.12□□□□□ -1.59
SRP54-209ENST00000555746 DDAH1O94760 285 aa5.12□□□□□ -1.59
SRP54-209ENST00000555746 OXCT1P55809 520 aa5.12□□□□□ -1.59
SRP54-209ENST00000555746 CHMP4BP1P59074 171 aa5.12□□□□□ -1.59
SRP54-209ENST00000555746 RASGRF1Q13972 1273 aa5.12□□□□□ -1.59
SRP54-209ENST00000555746 NBPF9Q3BBW0 867 aa5.12□□□□□ -1.59
SRP54-209ENST00000555746 GNPTABQ3T906 1256 aa5.12□□□□□ -1.59
SRP54-209ENST00000555746 AXDND1Q5T1B0 1012 aaPredicted RBP5.12□□□□□ -1.59
SRP54-209ENST00000555746 MRM1Q6IN84 353 aaKnown RBP5.12□□□□□ -1.59
SRP54-209ENST00000555746 KIAA1211LQ6NV74 962 aa5.12□□□□□ -1.59
SRP54-209ENST00000555746 PIWIL2Q8TC59 973 aaKnown RBP5.12□□□□□ -1.59
SRP54-209ENST00000555746 ZNF669Q96BR6 464 aaPredicted RBP5.12□□□□□ -1.59
SRP54-209ENST00000555746 ST7Q9NRC1 585 aa5.12□□□□□ -1.59
SRP54-209ENST00000555746 ATG3Q9NT62 314 aa5.12□□□□□ -1.59
SRP54-209ENST00000555746 PRR13Q9NZ81 148 aa5.12□□□□□ -1.59
SRP54-209ENST00000555746 PCDHB10Q9UN67 800 aa5.12□□□□□ -1.59
SRP54-209ENST00000555746 CAPN6Q9Y6Q1 641 aa5.12□□□□□ -1.59
SRP54-209ENST00000555746 RSF1Q96T23 1441 aaPredicted RBP5.12□□□□□ -1.59
SRP54-209ENST00000555746 K7ELQ4 463 aaPredicted RBP5.11□□□□□ -1.59
SRP54-209ENST00000555746 SHOXO15266 292 aa5.11□□□□□ -1.59
SRP54-209ENST00000555746 PDPK1O15530 556 aa5.11□□□□□ -1.59
SRP54-209ENST00000555746 CBFA2T2O43439 604 aa5.11□□□□□ -1.59
SRP54-209ENST00000555746 AUHQ13825 339 aaKnown RBP5.11□□□□□ -1.59
SRP54-209ENST00000555746 TDRD10Q5VZ19 366 aaKnown RBP5.11□□□□□ -1.59
SRP54-209ENST00000555746 CCDC144CPQ8IYA2 1237 aa5.11□□□□□ -1.59
SRP54-209ENST00000555746 C7orf61Q8IZ16 206 aa5.11□□□□□ -1.59
SRP54-209ENST00000555746 MFSD4AQ8N468 514 aa5.11□□□□□ -1.59
SRP54-209ENST00000555746 DTWD2Q8NBA8 298 aa5.11□□□□□ -1.59
SRP54-209ENST00000555746 ST13P5Q8NFI4 369 aaPredicted RBP5.11□□□□□ -1.59
SRP54-209ENST00000555746 ZNF512BQ96KM6 892 aaPredicted RBP5.11□□□□□ -1.59
SRP54-209ENST00000555746 DEPDC7Q96QD5 511 aa5.11□□□□□ -1.59
SRP54-209ENST00000555746 HAUS7Q99871 368 aa5.11□□□□□ -1.59
SRP54-209ENST00000555746 MKRN2Q9H000 416 aaKnown RBP5.11□□□□□ -1.59
SRP54-209ENST00000555746 KLHL25Q9H0H3 589 aa5.11□□□□□ -1.59
SRP54-209ENST00000555746 EPN3Q9H201 632 aa5.11□□□□□ -1.59
SRP54-209ENST00000555746 ZSWIM4Q9H7M6 989 aa5.11□□□□□ -1.59
SRP54-209ENST00000555746 SNTG2Q9NY99 539 aa5.11□□□□□ -1.59
SRP54-209ENST00000555746 PIM2Q9P1W9 311 aa5.11□□□□□ -1.59
SRP54-209ENST00000555746 KCNH3Q9ULD8 1083 aa5.11□□□□□ -1.59
SRP54-209ENST00000555746 CDK11AQ9UQ88 783 aaPredicted RBP5.11□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms