RNA–Protein interactions for RNA: ENST00000555414.5

APEX1-210, Transcript of apurinic/apyrimidinic endodeoxyribonuclease 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene APEX1, Length 1,437 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APEX1-210ENST00000555414 SLC4A3P48751 1232 aa13.54□□□□□ -0.24
APEX1-210ENST00000555414 AKAP17AQ02040 695 aaKnown RBP13.54□□□□□ -0.24
APEX1-210ENST00000555414 SCRN1Q12765 414 aa13.54□□□□□ -0.24
APEX1-210ENST00000555414 MAP3K11Q16584 847 aa13.54□□□□□ -0.24
APEX1-210ENST00000555414 ASPRV1Q53RT3 343 aa13.54□□□□□ -0.24
APEX1-210ENST00000555414 TRIM22Q8IYM9 498 aa13.54□□□□□ -0.24
APEX1-210ENST00000555414 C2orf69Q8N8R5 385 aa13.54□□□□□ -0.24
APEX1-210ENST00000555414 GMCL1P1Q8NEA9 526 aa13.54□□□□□ -0.24
APEX1-210ENST00000555414 FEZ1Q99689 392 aa13.54□□□□□ -0.24
APEX1-210ENST00000555414 MYL10Q9BUA6 226 aa13.54□□□□□ -0.24
APEX1-210ENST00000555414 TMX2Q9Y320 296 aa13.54□□□□□ -0.24
APEX1-210ENST00000555414 SIPA1L1O43166 1804 aa13.53□□□□□ -0.24
APEX1-210ENST00000555414 NID2Q14112 1375 aa13.53□□□□□ -0.24
APEX1-210ENST00000555414 MYH8P13535 1937 aa13.53□□□□□ -0.24
APEX1-210ENST00000555414 RAD21O60216 631 aa13.53□□□□□ -0.24
APEX1-210ENST00000555414 LARGE1O95461 756 aa13.53□□□□□ -0.24
APEX1-210ENST00000555414 PTPRAP18433 802 aa13.53□□□□□ -0.24
APEX1-210ENST00000555414 PDCP20941 246 aa13.53□□□□□ -0.24
APEX1-210ENST00000555414 USP14P54578 494 aa13.53□□□□□ -0.24
APEX1-210ENST00000555414 GRM4Q14833 912 aa13.53□□□□□ -0.24
APEX1-210ENST00000555414 GPATCH4Q5T3I0 446 aaKnown RBP13.53□□□□□ -0.24
APEX1-210ENST00000555414 CCDC144CPQ8IYA2 1237 aa13.53□□□□□ -0.24
APEX1-210ENST00000555414 LRRC47Q8N1G4 583 aaKnown RBP13.53□□□□□ -0.24
APEX1-210ENST00000555414 SPRYD3Q8NCJ5 442 aa13.53□□□□□ -0.24
APEX1-210ENST00000555414 RBM46Q8TBY0 533 aaKnown RBP13.53□□□□□ -0.24
APEX1-210ENST00000555414 DCAF4Q8WV16 495 aa13.53□□□□□ -0.24
APEX1-210ENST00000555414 WASF1Q92558 559 aa13.53□□□□□ -0.24
APEX1-210ENST00000555414 ZKSCAN4Q969J2 545 aaPredicted RBP13.53□□□□□ -0.24
APEX1-210ENST00000555414 WDR18Q9BV38 432 aa13.53□□□□□ -0.24
APEX1-210ENST00000555414 ZNF408Q9H9D4 720 aa13.53□□□□□ -0.24
APEX1-210ENST00000555414 RBM27Q9P2N5 1060 aaKnown RBP13.53□□□□□ -0.24
APEX1-210ENST00000555414 UTRNP46939 3433 aa13.52□□□□□ -0.24
APEX1-210ENST00000555414 C19orf81C9J6K1 198 aa13.52□□□□□ -0.25
APEX1-210ENST00000555414 USP17L10C9JJH3 530 aa13.52□□□□□ -0.25
APEX1-210ENST00000555414 F5H6K3 240 aa13.52□□□□□ -0.25
APEX1-210ENST00000555414 RXRAP19793 462 aa13.52□□□□□ -0.25
APEX1-210ENST00000555414 SMARCA1P28370 1054 aa13.52□□□□□ -0.25
APEX1-210ENST00000555414 SLC1A4P43007 532 aa13.52□□□□□ -0.25
APEX1-210ENST00000555414 JAG1P78504 1218 aa13.52□□□□□ -0.25
APEX1-210ENST00000555414 KLRC3Q07444 240 aa13.52□□□□□ -0.25
APEX1-210ENST00000555414 SSRP1Q08945 709 aaKnown RBP13.52□□□□□ -0.25
APEX1-210ENST00000555414 SLFN13Q68D06 897 aa13.52□□□□□ -0.25
APEX1-210ENST00000555414 SIAH1Q8IUQ4 282 aa13.52□□□□□ -0.25
APEX1-210ENST00000555414 FAM184AQ8NB25 1140 aa13.52□□□□□ -0.25
APEX1-210ENST00000555414 ZNF280CQ8ND82 737 aa13.52□□□□□ -0.25
APEX1-210ENST00000555414 SMC1BQ8NDV3 1235 aa13.52□□□□□ -0.25
APEX1-210ENST00000555414 LPAR1Q92633 364 aa13.52□□□□□ -0.25
APEX1-210ENST00000555414 NCOA5Q9HCD5 579 aaKnown RBP13.52□□□□□ -0.25
APEX1-210ENST00000555414 GBA2Q9HCG7 927 aaPredicted RBP13.52□□□□□ -0.25
APEX1-210ENST00000555414 ISY1Q9ULR0 285 aaKnown RBP13.52□□□□□ -0.25
APEX1-210ENST00000555414 MTMR7Q9Y216 660 aa13.52□□□□□ -0.25
APEX1-210ENST00000555414 ZHX2Q9Y6X8 837 aa13.52□□□□□ -0.25
APEX1-210ENST00000555414 TRAF5O00463 557 aa13.51□□□□□ -0.25
APEX1-210ENST00000555414 CELF2O95319 508 aaKnown RBP13.51□□□□□ -0.25
APEX1-210ENST00000555414 PDHBP11177 359 aa13.51□□□□□ -0.25
APEX1-210ENST00000555414 IFNAR1P17181 557 aa13.51□□□□□ -0.25
APEX1-210ENST00000555414 ADD1P35611 737 aaKnown RBP13.51□□□□□ -0.25
APEX1-210ENST00000555414 VGLL4Q14135 290 aa13.51□□□□□ -0.25
APEX1-210ENST00000555414 CCDC96Q2M329 555 aa13.51□□□□□ -0.25
APEX1-210ENST00000555414 DLK2Q6UY11 383 aa13.51□□□□□ -0.25
APEX1-210ENST00000555414 PPP1R3FQ6ZSY5 799 aaPredicted RBP13.51□□□□□ -0.25
APEX1-210ENST00000555414 ERO1BQ86YB8 467 aa13.51□□□□□ -0.25
APEX1-210ENST00000555414 RAB11FIP4Q86YS3 637 aa13.51□□□□□ -0.25
APEX1-210ENST00000555414 CLEC10AQ8IUN9 316 aa13.51□□□□□ -0.25
APEX1-210ENST00000555414 SLC10A4Q96EP9 437 aa13.51□□□□□ -0.25
APEX1-210ENST00000555414 GMCL1Q96IK5 515 aa13.51□□□□□ -0.25
APEX1-210ENST00000555414 KIAA1683Q9H0B3 1180 aa13.51□□□□□ -0.25
APEX1-210ENST00000555414 VCPKMTQ9H867 229 aa13.51□□□□□ -0.25
APEX1-210ENST00000555414 FOXD4L1Q9NU39 408 aa13.51□□□□□ -0.25
APEX1-210ENST00000555414 SSC5DA1L4H1 1573 aa13.51□□□□□ -0.25
APEX1-210ENST00000555414 POLR2AP24928 1970 aaKnown RBP13.5□□□□□ -0.25
APEX1-210ENST00000555414 PALM3A6NDB9 673 aaPredicted RBP13.5□□□□□ -0.25
APEX1-210ENST00000555414 KLRF2D3W0D1 207 aa13.5□□□□□ -0.25
APEX1-210ENST00000555414 SNHG28P0DPA3 235 aa13.5□□□□□ -0.25
APEX1-210ENST00000555414 YY1P25490 414 aa13.5□□□□□ -0.25
APEX1-210ENST00000555414 PPATQ06203 517 aa13.5□□□□□ -0.25
APEX1-210ENST00000555414 SHROOM1Q2M3G4 852 aaPredicted RBP13.5□□□□□ -0.25
APEX1-210ENST00000555414 TMTC3Q6ZXV5 915 aa13.5□□□□□ -0.25
APEX1-210ENST00000555414 TMOD4Q9NZQ9 345 aa13.5□□□□□ -0.25
APEX1-210ENST00000555414 PTPDC1A2A3K4 754 aa13.49□□□□□ -0.25
APEX1-210ENST00000555414 TOMM70O94826 608 aa13.49□□□□□ -0.25
APEX1-210ENST00000555414 ITGBL1O95965 494 aaPredicted RBP13.49□□□□□ -0.25
APEX1-210ENST00000555414 BMP3P12645 472 aa13.49□□□□□ -0.25
APEX1-210ENST00000555414 XBP1P17861 261 aa13.49□□□□□ -0.25
APEX1-210ENST00000555414 GJB2P29033 226 aa13.49□□□□□ -0.25
APEX1-210ENST00000555414 CDC27P30260 824 aa13.49□□□□□ -0.25
APEX1-210ENST00000555414 BACE1P56817 501 aa13.49□□□□□ -0.25
APEX1-210ENST00000555414 ZNF543Q08ER8 600 aa13.49□□□□□ -0.25
APEX1-210ENST00000555414 SPP2Q13103 211 aa13.49□□□□□ -0.25
APEX1-210ENST00000555414 LDLRAD1Q5T700 205 aa13.49□□□□□ -0.25
APEX1-210ENST00000555414 USP17L2Q6R6M4 530 aa13.49□□□□□ -0.25
APEX1-210ENST00000555414 NSUN7Q8NE18 718 aaKnown RBP13.49□□□□□ -0.25
APEX1-210ENST00000555414 ACER1Q8TDN7 264 aa13.49□□□□□ -0.25
APEX1-210ENST00000555414 CHURC1Q8WUH1 139 aa13.49□□□□□ -0.25
APEX1-210ENST00000555414 RNF26Q9BY78 433 aaPredicted RBP13.49□□□□□ -0.25
APEX1-210ENST00000555414 FAM217BQ9NTX9 383 aaPredicted RBP13.49□□□□□ -0.25
APEX1-210ENST00000555414 MAD2L2Q9UI95 211 aa13.49□□□□□ -0.25
APEX1-210ENST00000555414 CIZ1Q9ULV3 898 aaPredicted RBP13.49□□□□□ -0.25
APEX1-210ENST00000555414 FZD1Q9UP38 647 aa13.49□□□□□ -0.25
APEX1-210ENST00000555414 SNCAIPQ9Y6H5 919 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms