RNA–Protein interactions for RNA: ENST00000553455.1

SYNE2-210, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 2 BASIC

Gene SYNE2, Length 674 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-210ENST00000553455 KCNF1Q9H3M0 494 aa7.69□□□□□ -1.18
SYNE2-210ENST00000553455 CNTNAP4Q9C0A0 1308 aa7.69□□□□□ -1.18
SYNE2-210ENST00000553455 FAM181BA6NEQ2 426 aa7.68□□□□□ -1.18
SYNE2-210ENST00000553455 DHX15O43143 795 aaKnown RBP7.68□□□□□ -1.18
SYNE2-210ENST00000553455 LEFTY1O75610 366 aa7.68□□□□□ -1.18
SYNE2-210ENST00000553455 EPHX1P07099 455 aa7.68□□□□□ -1.18
SYNE2-210ENST00000553455 NFKBIBQ15653 356 aa7.68□□□□□ -1.18
SYNE2-210ENST00000553455 DCAF15Q66K64 600 aa7.68□□□□□ -1.18
SYNE2-210ENST00000553455 KLHL25Q9H0H3 589 aa7.68□□□□□ -1.18
SYNE2-210ENST00000553455 EPN3Q9H201 632 aa7.68□□□□□ -1.18
SYNE2-210ENST00000553455 ETV3P41162 512 aa7.67□□□□□ -1.18
SYNE2-210ENST00000553455 GSK3AP49840 483 aa7.67□□□□□ -1.18
SYNE2-210ENST00000553455 ZNF143P52747 638 aaPredicted RBP7.67□□□□□ -1.18
SYNE2-210ENST00000553455 SSRP1Q08945 709 aaKnown RBP7.67□□□□□ -1.18
SYNE2-210ENST00000553455 SQSTM1Q13501 440 aa7.67□□□□□ -1.18
SYNE2-210ENST00000553455 C2orf27AQ580R0 203 aa7.67□□□□□ -1.18
SYNE2-210ENST00000553455 PAOXQ6QHF9 649 aa7.67□□□□□ -1.18
SYNE2-210ENST00000553455 ZNF662Q6ZS27 426 aa7.67□□□□□ -1.18
SYNE2-210ENST00000553455 CLEC10AQ8IUN9 316 aa7.67□□□□□ -1.18
SYNE2-210ENST00000553455 CCDC144CPQ8IYA2 1237 aa7.67□□□□□ -1.18
SYNE2-210ENST00000553455 ZNF513Q8N8E2 541 aaPredicted RBP7.67□□□□□ -1.18
SYNE2-210ENST00000553455 RNF141Q8WVD5 230 aa7.67□□□□□ -1.18
SYNE2-210ENST00000553455 FAM83CQ9BQN1 747 aa7.67□□□□□ -1.18
SYNE2-210ENST00000553455 MKRN2Q9H000 416 aaKnown RBP7.67□□□□□ -1.18
SYNE2-210ENST00000553455 KDM2BQ8NHM5 1336 aa7.67□□□□□ -1.18
SYNE2-210ENST00000553455 ANKRD34BA5PLL1 514 aa7.66□□□□□ -1.18
SYNE2-210ENST00000553455 ADCY3O60266 1144 aa7.66□□□□□ -1.18
SYNE2-210ENST00000553455 HSD3B2P26439 372 aa7.66□□□□□ -1.18
SYNE2-210ENST00000553455 ADMP35318 185 aa7.66□□□□□ -1.18
SYNE2-210ENST00000553455 RNF4P78317 190 aa7.66□□□□□ -1.18
SYNE2-210ENST00000553455 ANKRD39Q53RE8 183 aa7.66□□□□□ -1.18
SYNE2-210ENST00000553455 FAM214BQ7L5A3 538 aa7.66□□□□□ -1.18
SYNE2-210ENST00000553455 THAP3Q8WTV1 239 aaPredicted RBP7.66□□□□□ -1.18
SYNE2-210ENST00000553455 FBXL18Q96ME1 805 aa7.66□□□□□ -1.18
SYNE2-210ENST00000553455 ASPNQ9BXN1 380 aa7.66□□□□□ -1.18
SYNE2-210ENST00000553455 TMEM260Q9NX78 707 aa7.66□□□□□ -1.18
SYNE2-210ENST00000553455 APEX2Q9UBZ4 518 aa7.66□□□□□ -1.18
SYNE2-210ENST00000553455 LEMD3Q9Y2U8 911 aa7.66□□□□□ -1.18
SYNE2-210ENST00000553455 ZNF451Q9Y4E5 1061 aa7.66□□□□□ -1.18
SYNE2-210ENST00000553455 ESYT3A0FGR9 886 aa7.65□□□□□ -1.18
SYNE2-210ENST00000553455 HMX2A2RU54 273 aa7.65□□□□□ -1.18
SYNE2-210ENST00000553455 ITGB2P05107 769 aa7.65□□□□□ -1.18
SYNE2-210ENST00000553455 FAM87AP0C7U9 286 aa7.65□□□□□ -1.18
SYNE2-210ENST00000553455 HEATR6Q6AI08 1181 aaKnown RBP7.65□□□□□ -1.18
SYNE2-210ENST00000553455 C7orf61Q8IZ16 206 aa7.65□□□□□ -1.18
SYNE2-210ENST00000553455 SHISA5Q8N114 240 aa7.65□□□□□ -1.18
SYNE2-210ENST00000553455 C7orf69Q9H7B7 122 aa7.65□□□□□ -1.18
SYNE2-210ENST00000553455 PTCH2Q9Y6C5 1203 aa7.65□□□□□ -1.18
SYNE2-210ENST00000553455 CHMP4BP1P59074 171 aa7.64□□□□□ -1.19
SYNE2-210ENST00000553455 AUHQ13825 339 aaKnown RBP7.64□□□□□ -1.19
SYNE2-210ENST00000553455 FGD4Q96M96 766 aa7.64□□□□□ -1.19
SYNE2-210ENST00000553455 SPATA9Q9BWV2 254 aa7.64□□□□□ -1.19
SYNE2-210ENST00000553455 FANCLQ9NW38 375 aa7.64□□□□□ -1.19
SYNE2-210ENST00000553455 STK17AQ9UEE5 414 aa7.64□□□□□ -1.19
SYNE2-210ENST00000553455 RAXQ9Y2V3 346 aa7.64□□□□□ -1.19
SYNE2-210ENST00000553455 LRRN2O75325 713 aa7.63□□□□□ -1.19
SYNE2-210ENST00000553455 FAM153BP0C7A2 387 aa7.63□□□□□ -1.19
SYNE2-210ENST00000553455 NAT2P11245 290 aa7.63□□□□□ -1.19
SYNE2-210ENST00000553455 CD247P20963 164 aa7.63□□□□□ -1.19
SYNE2-210ENST00000553455 GATA4P43694 442 aa7.63□□□□□ -1.19
SYNE2-210ENST00000553455 SNW1Q13573 536 aaKnown RBP7.63□□□□□ -1.19
SYNE2-210ENST00000553455 NBPF9Q3BBW0 867 aa7.63□□□□□ -1.19
SYNE2-210ENST00000553455 SV2CQ496J9 727 aa7.63□□□□□ -1.19
SYNE2-210ENST00000553455 PLEKHG4Q58EX7 1191 aa7.63□□□□□ -1.19
SYNE2-210ENST00000553455 ZAR1Q86SH2 424 aa7.63□□□□□ -1.19
SYNE2-210ENST00000553455 TP53INP1Q96A56 240 aa7.63□□□□□ -1.19
SYNE2-210ENST00000553455 SGSM3Q96HU1 749 aa7.63□□□□□ -1.19
SYNE2-210ENST00000553455 Q96M66 194 aa7.63□□□□□ -1.19
SYNE2-210ENST00000553455 APBA2Q99767 749 aa7.63□□□□□ -1.19
SYNE2-210ENST00000553455 LGR4Q9BXB1 951 aa7.63□□□□□ -1.19
SYNE2-210ENST00000553455 GP6Q9HCN6 339 aa7.63□□□□□ -1.19
SYNE2-210ENST00000553455 TPX2Q9ULW0 747 aaKnown RBP7.63□□□□□ -1.19
SYNE2-210ENST00000553455 SBNO2Q9Y2G9 1366 aa7.62□□□□□ -1.19
SYNE2-210ENST00000553455 A0A1W2PQU0 124 aa7.62□□□□□ -1.19
SYNE2-210ENST00000553455 CDC45O75419 566 aa7.62□□□□□ -1.19
SYNE2-210ENST00000553455 OGFOD3Q6PK18 319 aa7.62□□□□□ -1.19
SYNE2-210ENST00000553455 PRR23CQ6ZRP0 262 aa7.62□□□□□ -1.19
SYNE2-210ENST00000553455 LRRC47Q8N1G4 583 aaKnown RBP7.62□□□□□ -1.19
SYNE2-210ENST00000553455 HEXIM2Q96MH2 286 aaKnown RBP7.62□□□□□ -1.19
SYNE2-210ENST00000553455 TBC1D32Q96NH3 1257 aa7.62□□□□□ -1.19
SYNE2-210ENST00000553455 PRDM5Q9NQX1 630 aaPredicted RBP7.62□□□□□ -1.19
SYNE2-210ENST00000553455 ARHGEF4Q9NR80 690 aa7.62□□□□□ -1.19
SYNE2-210ENST00000553455 WHRNQ9P202 907 aa7.62□□□□□ -1.19
SYNE2-210ENST00000553455 IQCA1LA6NCM1 817 aa7.61□□□□□ -1.19
SYNE2-210ENST00000553455 PRR33A8MZF0 331 aa7.61□□□□□ -1.19
SYNE2-210ENST00000553455 CAPNS1P04632 268 aa7.61□□□□□ -1.19
SYNE2-210ENST00000553455 ITGAVP06756 1048 aa7.61□□□□□ -1.19
SYNE2-210ENST00000553455 KCNMA1Q12791 1236 aa7.61□□□□□ -1.19
SYNE2-210ENST00000553455 GPAT2Q6NUI2 795 aa7.61□□□□□ -1.19
SYNE2-210ENST00000553455 C22orf34Q6ZV56 151 aa7.61□□□□□ -1.19
SYNE2-210ENST00000553455 ZNF227Q86WZ6 799 aa7.61□□□□□ -1.19
SYNE2-210ENST00000553455 HOMER1Q86YM7 354 aa7.61□□□□□ -1.19
SYNE2-210ENST00000553455 ZBTB38Q8NAP3 1195 aaPredicted RBP7.61□□□□□ -1.19
SYNE2-210ENST00000553455 DTWD2Q8NBA8 298 aa7.61□□□□□ -1.19
SYNE2-210ENST00000553455 GIMAP7Q8NHV1 300 aa7.61□□□□□ -1.19
SYNE2-210ENST00000553455 APPBP2Q92624 585 aa7.61□□□□□ -1.19
SYNE2-210ENST00000553455 PRDM14Q9GZV8 571 aa7.61□□□□□ -1.19
SYNE2-210ENST00000553455 GBP3Q9H0R5 595 aa7.61□□□□□ -1.19
SYNE2-210ENST00000553455 TPSG1Q9NRR2 321 aa7.61□□□□□ -1.19
SYNE2-210ENST00000553455 STOML1Q9UBI4 398 aa7.61□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms