RNA–Protein interactions for RNA: ENST00000553409.5

NRDE2-202, Transcript of NRDE-2, necessary for RNA interference, domain containing, humanhuman

TSL 1 (best)

Gene NRDE2, Length 3,434 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NRDE2-202ENST00000553409 FAM205CA6NFA0 338 aa12.78□□□□□ -0.36
NRDE2-202ENST00000553409 IFIT3O14879 490 aaKnown RBP12.78□□□□□ -0.36
NRDE2-202ENST00000553409 EIF3HO15372 352 aaKnown RBP eCLIP12.78□□□□□ -0.36
NRDE2-202ENST00000553409 INPP5BP32019 993 aa12.78□□□□□ -0.36
NRDE2-202ENST00000553409 GNGT1P63211 74 aa12.78□□□□□ -0.36
NRDE2-202ENST00000553409 ZSWIM5Q9P217 1185 aa12.78□□□□□ -0.36
NRDE2-202ENST00000553409 A1BGP04217 495 aa12.78□□□□□ -0.36
NRDE2-202ENST00000553409 HERVK_113P62684 666 aa12.78□□□□□ -0.36
NRDE2-202ENST00000553409 ANKRD20A12PQ8NF67 263 aa12.78□□□□□ -0.36
NRDE2-202ENST00000553409 WASF1Q92558 559 aa12.78□□□□□ -0.36
NRDE2-202ENST00000553409 SYMPKQ92797 1274 aaKnown RBP12.78□□□□□ -0.36
NRDE2-202ENST00000553409 CCDC85AQ96PX6 553 aaPredicted RBP12.78□□□□□ -0.36
NRDE2-202ENST00000553409 GNL3LQ9NVN8 582 aaKnown RBP12.78□□□□□ -0.36
NRDE2-202ENST00000553409 TTC26A0AVF1 554 aa12.78□□□□□ -0.36
NRDE2-202ENST00000553409 MAP2K2P36507 400 aa12.78□□□□□ -0.36
NRDE2-202ENST00000553409 LMOD2Q6P5Q4 547 aa12.78□□□□□ -0.36
NRDE2-202ENST00000553409 CAGE1Q8TC20 777 aa12.78□□□□□ -0.36
NRDE2-202ENST00000553409 BLZF1Q9H2G9 400 aa12.78□□□□□ -0.36
NRDE2-202ENST00000553409 AATFQ9NY61 560 aaKnown RBP eCLIP12.78□□□□□ -0.36
NRDE2-202ENST00000553409 CEP131Q9UPN4 1083 aa12.78□□□□□ -0.36
NRDE2-202ENST00000553409 SHTN1A0MZ66 631 aa12.77□□□□□ -0.36
NRDE2-202ENST00000553409 ADD2P35612 726 aa12.77□□□□□ -0.36
NRDE2-202ENST00000553409 UBXN1Q04323 297 aa12.77□□□□□ -0.36
NRDE2-202ENST00000553409 RRP36Q96EU6 259 aaKnown RBP12.77□□□□□ -0.36
NRDE2-202ENST00000553409 NBPF26B4DH59 902 aa12.77□□□□□ -0.37
NRDE2-202ENST00000553409 C2orf54Q08AI8 447 aa12.77□□□□□ -0.37
NRDE2-202ENST00000553409 TTF1Q15361 905 aaPredicted RBP12.77□□□□□ -0.37
NRDE2-202ENST00000553409 ESCO1Q5FWF5 840 aa12.77□□□□□ -0.37
NRDE2-202ENST00000553409 TCP11X2Q5H9J9 407 aa12.77□□□□□ -0.37
NRDE2-202ENST00000553409 RRAGBQ5VZM2 374 aa12.77□□□□□ -0.37
NRDE2-202ENST00000553409 NBPF10Q6P3W6 841 aaKnown RBP12.77□□□□□ -0.37
NRDE2-202ENST00000553409 SND1Q7KZF4 910 aaKnown RBP eCLIP12.77□□□□□ -0.37
NRDE2-202ENST00000553409 TRIM22Q8IYM9 498 aa12.77□□□□□ -0.37
NRDE2-202ENST00000553409 NBPF15Q8N660 670 aa12.77□□□□□ -0.37
NRDE2-202ENST00000553409 RPGRIP1Q96KN7 1286 aa12.77□□□□□ -0.37
NRDE2-202ENST00000553409 SPEF2Q9C093 1822 aa12.77□□□□□ -0.37
NRDE2-202ENST00000553409 PHKG2P15735 406 aa12.76□□□□□ -0.37
NRDE2-202ENST00000553409 LIFRP42702 1097 aa12.76□□□□□ -0.37
NRDE2-202ENST00000553409 MCAMP43121 646 aa12.76□□□□□ -0.37
NRDE2-202ENST00000553409 CKAP4Q07065 602 aaKnown RBP12.76□□□□□ -0.37
NRDE2-202ENST00000553409 TRIM14Q14142 442 aa12.76□□□□□ -0.37
NRDE2-202ENST00000553409 EZH2Q15910 746 aaKnown RBP12.76□□□□□ -0.37
NRDE2-202ENST00000553409 OR8K1Q8NGG5 319 aa12.76□□□□□ -0.37
NRDE2-202ENST00000553409 AENQ8WTP8 325 aaKnown RBP12.76□□□□□ -0.37
NRDE2-202ENST00000553409 SH3GL2Q99962 352 aa12.76□□□□□ -0.37
NRDE2-202ENST00000553409 LACRTQ9GZZ8 138 aa12.76□□□□□ -0.37
NRDE2-202ENST00000553409 TBC1D2BQ9UPU7 963 aa12.76□□□□□ -0.37
NRDE2-202ENST00000553409 KCNJ18B7U540 433 aa12.76□□□□□ -0.37
NRDE2-202ENST00000553409 MRPS25P82663 173 aaKnown RBP12.76□□□□□ -0.37
NRDE2-202ENST00000553409 KCNJ12Q14500 433 aa12.76□□□□□ -0.37
NRDE2-202ENST00000553409 POTEDQ86YR6 584 aa12.76□□□□□ -0.37
NRDE2-202ENST00000553409 HDAC7Q8WUI4 952 aa12.76□□□□□ -0.37
NRDE2-202ENST00000553409 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.76□□□□□ -0.37
NRDE2-202ENST00000553409 FAM184BQ9ULE4 1060 aa12.76□□□□□ -0.37
NRDE2-202ENST00000553409 TACC3Q9Y6A5 838 aa12.76□□□□□ -0.37
NRDE2-202ENST00000553409 CAPN7Q9Y6W3 813 aa12.76□□□□□ -0.37
NRDE2-202ENST00000553409 RCCD1A6NED2 376 aa12.76□□□□□ -0.37
NRDE2-202ENST00000553409 CTDSPL2Q05D32 466 aa12.76□□□□□ -0.37
NRDE2-202ENST00000553409 CCDC57Q2TAC2 916 aa12.76□□□□□ -0.37
NRDE2-202ENST00000553409 EARS2Q5JPH6 523 aaKnown RBP12.76□□□□□ -0.37
NRDE2-202ENST00000553409 WDR59Q6PJI9 974 aa12.76□□□□□ -0.37
NRDE2-202ENST00000553409 ANKRD18AQ8IVF6 992 aa12.76□□□□□ -0.37
NRDE2-202ENST00000553409 RAPGEF4Q8WZA2 1011 aa12.76□□□□□ -0.37
NRDE2-202ENST00000553409 AIDAQ96BJ3 306 aa12.76□□□□□ -0.37
NRDE2-202ENST00000553409 ZKSCAN3Q9BRR0 538 aa12.76□□□□□ -0.37
NRDE2-202ENST00000553409 ZBTB3Q9H5J0 574 aa12.76□□□□□ -0.37
NRDE2-202ENST00000553409 MAPK8IP1Q9UQF2 711 aa12.76□□□□□ -0.37
NRDE2-202ENST00000553409 TRIM75PA6NK02 468 aa12.75□□□□□ -0.37
NRDE2-202ENST00000553409 IDH1O75874 414 aaKnown RBP12.75□□□□□ -0.37
NRDE2-202ENST00000553409 RTN1Q16799 776 aa12.75□□□□□ -0.37
NRDE2-202ENST00000553409 VPS54Q9P1Q0 977 aa12.75□□□□□ -0.37
NRDE2-202ENST00000553409 DUSP10Q9Y6W6 482 aa12.75□□□□□ -0.37
NRDE2-202ENST00000553409 ECM29Q5VYK3 1845 aa12.75□□□□□ -0.37
NRDE2-202ENST00000553409 MYO1FO00160 1098 aa12.75□□□□□ -0.37
NRDE2-202ENST00000553409 TULP1O00294 542 aaPredicted RBP12.75□□□□□ -0.37
NRDE2-202ENST00000553409 WNT7AO00755 349 aa12.75□□□□□ -0.37
NRDE2-202ENST00000553409 KIAA1328Q86T90 577 aa12.75□□□□□ -0.37
NRDE2-202ENST00000553409 CNPY4Q8N129 248 aa12.75□□□□□ -0.37
NRDE2-202ENST00000553409 CRACR2BQ8N4Y2 399 aaPredicted RBP12.75□□□□□ -0.37
NRDE2-202ENST00000553409 ARL8AQ96BM9 186 aa12.75□□□□□ -0.37
NRDE2-202ENST00000553409 JADE2Q9NQC1 790 aa12.75□□□□□ -0.37
NRDE2-202ENST00000553409 DMGDHQ9UI17 866 aaKnown RBP12.75□□□□□ -0.37
NRDE2-202ENST00000553409 ATP6V1AP38606 617 aa12.75□□□□□ -0.37
NRDE2-202ENST00000553409 USP8P40818 1118 aa12.75□□□□□ -0.37
NRDE2-202ENST00000553409 SPAG1Q07617 926 aa12.75□□□□□ -0.37
NRDE2-202ENST00000553409 GBP6Q6ZN66 633 aa12.75□□□□□ -0.37
NRDE2-202ENST00000553409 PRPF38AQ8NAV1 312 aaKnown RBP12.75□□□□□ -0.37
NRDE2-202ENST00000553409 SHISA4Q96DD7 197 aa12.75□□□□□ -0.37
NRDE2-202ENST00000553409 RWDD2AQ9UIY3 292 aa12.75□□□□□ -0.37
NRDE2-202ENST00000553409 LUC7L2Q9Y383 392 aaKnown RBP12.75□□□□□ -0.37
NRDE2-202ENST00000553409 XDHP47989 1333 aa12.75□□□□□ -0.37
NRDE2-202ENST00000553409 SLIT3O75094 1523 aa12.75□□□□□ -0.37
NRDE2-202ENST00000553409 ARFGEF2Q9Y6D5 1785 aa12.74□□□□□ -0.37
NRDE2-202ENST00000553409 DEXIO95424 95 aa12.74□□□□□ -0.37
NRDE2-202ENST00000553409 PPARAQ07869 468 aa12.74□□□□□ -0.37
NRDE2-202ENST00000553409 PAK1Q13153 545 aa12.74□□□□□ -0.37
NRDE2-202ENST00000553409 NELFBQ8WX92 580 aa12.74□□□□□ -0.37
NRDE2-202ENST00000553409 ZNF532Q9HCE3 1301 aa12.74□□□□□ -0.37
NRDE2-202ENST00000553409 PES1O00541 588 aaKnown RBP12.74□□□□□ -0.37
NRDE2-202ENST00000553409 NDUFAB1O14561 156 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms