RNA–Protein interactions for RNA: ENST00000552839.6

TMEM116-218, Transcript of transmembrane protein 116, humanhuman

TSL 4

Gene TMEM116, Length 511 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-218ENST00000552839 MYH1P12882 1939 aa13.6□□□□□ -0.23
TMEM116-218ENST00000552839 RLFQ13129 1914 aa13.6□□□□□ -0.23
TMEM116-218ENST00000552839 UNC80Q8N2C7 3258 aa13.6□□□□□ -0.23
TMEM116-218ENST00000552839 MAGEB6P1A0A0J9YX57 407 aa13.6□□□□□ -0.23
TMEM116-218ENST00000552839 RNF113AO15541 343 aaKnown RBP13.6□□□□□ -0.23
TMEM116-218ENST00000552839 GSPT1P15170 499 aaKnown RBP13.6□□□□□ -0.23
TMEM116-218ENST00000552839 PLCG2P16885 1265 aa13.6□□□□□ -0.23
TMEM116-218ENST00000552839 MAP2K5Q13163 448 aa13.6□□□□□ -0.23
TMEM116-218ENST00000552839 CERS3Q8IU89 383 aa13.6□□□□□ -0.23
TMEM116-218ENST00000552839 FOXP4Q8IVH2 680 aaPredicted RBP13.6□□□□□ -0.23
TMEM116-218ENST00000552839 MAPKAPK5Q8IW41 473 aa13.6□□□□□ -0.23
TMEM116-218ENST00000552839 MIGA1Q8NAN2 632 aa13.6□□□□□ -0.23
TMEM116-218ENST00000552839 GTF3C2Q8WUA4 911 aaPredicted RBP13.6□□□□□ -0.23
TMEM116-218ENST00000552839 DDRGK1Q96HY6 314 aa13.6□□□□□ -0.23
TMEM116-218ENST00000552839 FLRT1Q9NZU1 646 aa13.6□□□□□ -0.23
TMEM116-218ENST00000552839 PALD1Q9ULE6 856 aa13.6□□□□□ -0.23
TMEM116-218ENST00000552839 ZBTB21Q9ULJ3 1066 aa13.6□□□□□ -0.23
TMEM116-218ENST00000552839 CNMDO75829 334 aa13.59□□□□□ -0.23
TMEM116-218ENST00000552839 SDSP20132 328 aa13.59□□□□□ -0.23
TMEM116-218ENST00000552839 ADD2P35612 726 aa13.59□□□□□ -0.23
TMEM116-218ENST00000552839 ATN1P54259 1190 aaPredicted RBP13.59□□□□□ -0.23
TMEM116-218ENST00000552839 RUFY2Q8WXA3 655 aa13.59□□□□□ -0.23
TMEM116-218ENST00000552839 APPBP2Q92624 585 aa13.59□□□□□ -0.23
TMEM116-218ENST00000552839 LBHD1Q9BQE6 289 aaPredicted RBP13.59□□□□□ -0.23
TMEM116-218ENST00000552839 GINM1Q9NU53 330 aa13.59□□□□□ -0.23
TMEM116-218ENST00000552839 FLT1P17948 1338 aa13.59□□□□□ -0.23
TMEM116-218ENST00000552839 CDC45O75419 566 aa13.58□□□□□ -0.24
TMEM116-218ENST00000552839 MFAP1P55081 439 aaKnown RBP13.58□□□□□ -0.24
TMEM116-218ENST00000552839 PPP4CP60510 307 aa13.58□□□□□ -0.24
TMEM116-218ENST00000552839 UBE3CQ15386 1083 aa13.58□□□□□ -0.24
TMEM116-218ENST00000552839 ZNF697Q5TEC3 545 aa13.58□□□□□ -0.24
TMEM116-218ENST00000552839 MFSD14CQ5VZR4 134 aa13.58□□□□□ -0.24
TMEM116-218ENST00000552839 USP17L2Q6R6M4 530 aa13.58□□□□□ -0.24
TMEM116-218ENST00000552839 ADGRA1Q86SQ6 560 aa13.58□□□□□ -0.24
TMEM116-218ENST00000552839 CRACR2BQ8N4Y2 399 aaPredicted RBP13.58□□□□□ -0.24
TMEM116-218ENST00000552839 TRIM34Q9BYJ4 488 aa13.58□□□□□ -0.24
TMEM116-218ENST00000552839 CWC22Q9HCG8 908 aaKnown RBP13.58□□□□□ -0.24
TMEM116-218ENST00000552839 DDX20Q9UHI6 824 aaKnown RBP13.58□□□□□ -0.24
TMEM116-218ENST00000552839 RABGAP1Q9Y3P9 1069 aa13.58□□□□□ -0.24
TMEM116-218ENST00000552839 MBD4O95243 580 aa13.57□□□□□ -0.24
TMEM116-218ENST00000552839 USP5P45974 858 aa13.57□□□□□ -0.24
TMEM116-218ENST00000552839 TICAM2Q86XR7 235 aa13.57□□□□□ -0.24
TMEM116-218ENST00000552839 AMOTL1Q8IY63 956 aa13.57□□□□□ -0.24
TMEM116-218ENST00000552839 NPLOC4Q8TAT6 608 aa13.57□□□□□ -0.24
TMEM116-218ENST00000552839 LPAR1Q92633 364 aa13.57□□□□□ -0.24
TMEM116-218ENST00000552839 CRNKL1Q9BZJ0 848 aaKnown RBP13.57□□□□□ -0.24
TMEM116-218ENST00000552839 SLC15A5A6NIM6 579 aa13.56□□□□□ -0.24
TMEM116-218ENST00000552839 GH2P01242 217 aa13.56□□□□□ -0.24
TMEM116-218ENST00000552839 APPP05067 770 aa13.56□□□□□ -0.24
TMEM116-218ENST00000552839 PTPREP23469 700 aa13.56□□□□□ -0.24
TMEM116-218ENST00000552839 CNGA1P29973 690 aa13.56□□□□□ -0.24
TMEM116-218ENST00000552839 RTP1P59025 263 aa13.56□□□□□ -0.24
TMEM116-218ENST00000552839 NMIQ13287 307 aaPredicted RBP13.56□□□□□ -0.24
TMEM116-218ENST00000552839 ZYXQ15942 572 aaKnown RBP13.56□□□□□ -0.24
TMEM116-218ENST00000552839 WDR78Q5VTH9 848 aa13.56□□□□□ -0.24
TMEM116-218ENST00000552839 CWC27Q6UX04 472 aaKnown RBP13.56□□□□□ -0.24
TMEM116-218ENST00000552839 C12orf42Q96LP6 360 aa13.56□□□□□ -0.24
TMEM116-218ENST00000552839 CDX2Q99626 313 aaPredicted RBP13.56□□□□□ -0.24
TMEM116-218ENST00000552839 PRKAG2Q9UGJ0 569 aa13.56□□□□□ -0.24
TMEM116-218ENST00000552839 SAP30BPQ9UHR5 308 aaKnown RBP13.56□□□□□ -0.24
TMEM116-218ENST00000552839 USP17L15C9J2P7 530 aa13.55□□□□□ -0.24
TMEM116-218ENST00000552839 USP17L13C9JLJ4 530 aa13.55□□□□□ -0.24
TMEM116-218ENST00000552839 USP17L11C9JVI0 530 aa13.55□□□□□ -0.24
TMEM116-218ENST00000552839 USP17L18D6R9N7 530 aa13.55□□□□□ -0.24
TMEM116-218ENST00000552839 USP17L22D6RA61 530 aa13.55□□□□□ -0.24
TMEM116-218ENST00000552839 USP17L17D6RBQ6 530 aa13.55□□□□□ -0.24
TMEM116-218ENST00000552839 USP17L19D6RCP7 530 aa13.55□□□□□ -0.24
TMEM116-218ENST00000552839 USP17L20D6RJB6 530 aa13.55□□□□□ -0.24
TMEM116-218ENST00000552839 DNM1LO00429 736 aa13.55□□□□□ -0.24
TMEM116-218ENST00000552839 MSCO60682 206 aa13.55□□□□□ -0.24
TMEM116-218ENST00000552839 HOXC6P09630 235 aa13.55□□□□□ -0.24
TMEM116-218ENST00000552839 CYP2C19P33261 490 aa13.55□□□□□ -0.24
TMEM116-218ENST00000552839 CCNA1P78396 465 aa13.55□□□□□ -0.24
TMEM116-218ENST00000552839 ATP2B2Q01814 1243 aa13.55□□□□□ -0.24
TMEM116-218ENST00000552839 USP17L24Q0WX57 530 aa13.55□□□□□ -0.24
TMEM116-218ENST00000552839 SHHQ15465 462 aa13.55□□□□□ -0.24
TMEM116-218ENST00000552839 CATSPERGQ6ZRH7 1159 aa13.55□□□□□ -0.24
TMEM116-218ENST00000552839 TRPV1Q8NER1 839 aa13.55□□□□□ -0.24
TMEM116-218ENST00000552839 SEMA6BQ9H3T3 888 aa13.55□□□□□ -0.24
TMEM116-218ENST00000552839 ARMT1Q9H993 441 aa13.55□□□□□ -0.24
TMEM116-218ENST00000552839 HELLSQ9NRZ9 838 aa13.55□□□□□ -0.24
TMEM116-218ENST00000552839 BTBD7Q9P203 1132 aa13.55□□□□□ -0.24
TMEM116-218ENST00000552839 RAD50Q92878 1312 aa13.55□□□□□ -0.24
TMEM116-218ENST00000552839 GPAA1O43292 621 aa13.54□□□□□ -0.24
TMEM116-218ENST00000552839 IGHA2P01877 340 aa13.54□□□□□ -0.24
TMEM116-218ENST00000552839 HLA-DOAP06340 250 aa13.54□□□□□ -0.24
TMEM116-218ENST00000552839 GNAT2P19087 354 aa13.54□□□□□ -0.24
TMEM116-218ENST00000552839 DYNLL1P63167 89 aaKnown RBP13.54□□□□□ -0.24
TMEM116-218ENST00000552839 GRB14Q14449 540 aa13.54□□□□□ -0.24
TMEM116-218ENST00000552839 MCMDC2Q4G0Z9 681 aa13.54□□□□□ -0.24
TMEM116-218ENST00000552839 ZMYM1Q5SVZ6 1142 aa13.54□□□□□ -0.24
TMEM116-218ENST00000552839 C9orf50Q5SZB4 431 aa13.54□□□□□ -0.24
TMEM116-218ENST00000552839 GJC2Q5T442 439 aaPredicted RBP13.54□□□□□ -0.24
TMEM116-218ENST00000552839 KIAA1211Q6ZU35 1233 aa13.54□□□□□ -0.24
TMEM116-218ENST00000552839 MAFAQ8NHW3 353 aaPredicted RBP13.54□□□□□ -0.24
TMEM116-218ENST00000552839 FEZ1Q99689 392 aa13.54□□□□□ -0.24
TMEM116-218ENST00000552839 NACAP1Q9BZK3 213 aa13.54□□□□□ -0.24
TMEM116-218ENST00000552839 ATP11BQ9Y2G3 1177 aa13.54□□□□□ -0.24
TMEM116-218ENST00000552839 SLC4A4Q9Y6R1 1079 aa13.54□□□□□ -0.24
TMEM116-218ENST00000552839 DNAH12Q6ZR08 3092 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 97.1 ms