RNA–Protein interactions for RNA: ENST00000552483.5

CNOT2-239, Transcript of CCR4-NOT transcription complex subunit 2, humanhuman

TSL 5

Gene CNOT2, Length 895 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT2-239ENST00000552483 STAG1Q8WVM7 1258 aa12.89□□□□□ -0.35
CNOT2-239ENST00000552483 RUFY2Q8WXA3 655 aa12.89□□□□□ -0.35
CNOT2-239ENST00000552483 LSG1Q9H089 658 aaKnown RBP12.89□□□□□ -0.35
CNOT2-239ENST00000552483 RPAP3Q9H6T3 665 aaPredicted RBP12.89□□□□□ -0.35
CNOT2-239ENST00000552483 VCPKMTQ9H867 229 aa12.89□□□□□ -0.35
CNOT2-239ENST00000552483 TXNRD2Q9NNW7 524 aa12.89□□□□□ -0.35
CNOT2-239ENST00000552483 MTMR4Q9NYA4 1195 aa12.89□□□□□ -0.35
CNOT2-239ENST00000552483 NYAP2Q9P242 653 aa12.89□□□□□ -0.35
CNOT2-239ENST00000552483 RANBP6O60518 1105 aaKnown RBP12.88□□□□□ -0.35
CNOT2-239ENST00000552483 CNMDO75829 334 aa12.88□□□□□ -0.35
CNOT2-239ENST00000552483 OSBPP22059 807 aa12.88□□□□□ -0.35
CNOT2-239ENST00000552483 HERVK_113P62684 666 aa12.88□□□□□ -0.35
CNOT2-239ENST00000552483 IRX3P78415 501 aaPredicted RBP12.88□□□□□ -0.35
CNOT2-239ENST00000552483 LACTBP83111 547 aaPredicted RBP12.88□□□□□ -0.35
CNOT2-239ENST00000552483 CATSPERGQ6ZRH7 1159 aa12.88□□□□□ -0.35
CNOT2-239ENST00000552483 OTOP1Q7RTM1 612 aa12.88□□□□□ -0.35
CNOT2-239ENST00000552483 TNS4Q8IZW8 715 aa12.88□□□□□ -0.35
CNOT2-239ENST00000552483 LRRC47Q8N1G4 583 aaKnown RBP12.88□□□□□ -0.35
CNOT2-239ENST00000552483 SMCR8Q8TEV9 937 aaPredicted RBP12.88□□□□□ -0.35
CNOT2-239ENST00000552483 ERO1AQ96HE7 468 aa12.88□□□□□ -0.35
CNOT2-239ENST00000552483 NUP88Q99567 741 aaPredicted RBP12.88□□□□□ -0.35
CNOT2-239ENST00000552483 TOMM22Q9NS69 142 aa12.88□□□□□ -0.35
CNOT2-239ENST00000552483 CLIP2Q9UDT6 1046 aa12.88□□□□□ -0.35
CNOT2-239ENST00000552483 PNMA3Q9UL41 463 aa12.88□□□□□ -0.35
CNOT2-239ENST00000552483 TSPY2A6NKD2 308 aa12.87□□□□□ -0.35
CNOT2-239ENST00000552483 SPDYE16A6NNV3 312 aaPredicted RBP12.87□□□□□ -0.35
CNOT2-239ENST00000552483 USP17L15C9J2P7 530 aa12.87□□□□□ -0.35
CNOT2-239ENST00000552483 USP17L13C9JLJ4 530 aa12.87□□□□□ -0.35
CNOT2-239ENST00000552483 USP17L11C9JVI0 530 aa12.87□□□□□ -0.35
CNOT2-239ENST00000552483 USP17L18D6R9N7 530 aa12.87□□□□□ -0.35
CNOT2-239ENST00000552483 USP17L22D6RA61 530 aa12.87□□□□□ -0.35
CNOT2-239ENST00000552483 USP17L17D6RBQ6 530 aa12.87□□□□□ -0.35
CNOT2-239ENST00000552483 USP17L19D6RCP7 530 aa12.87□□□□□ -0.35
CNOT2-239ENST00000552483 USP17L20D6RJB6 530 aa12.87□□□□□ -0.35
CNOT2-239ENST00000552483 ZNF213O14771 459 aa12.87□□□□□ -0.35
CNOT2-239ENST00000552483 CDC45O75419 566 aa12.87□□□□□ -0.35
CNOT2-239ENST00000552483 CYP21A2P08686 494 aa12.87□□□□□ -0.35
CNOT2-239ENST00000552483 USP17L24Q0WX57 530 aa12.87□□□□□ -0.35
CNOT2-239ENST00000552483 PABPC4Q13310 644 aaKnown RBP eCLIP12.87□□□□□ -0.35
CNOT2-239ENST00000552483 STOX1Q6ZVD7 989 aa12.87□□□□□ -0.35
CNOT2-239ENST00000552483 MAP4K1Q92918 833 aa12.87□□□□□ -0.35
CNOT2-239ENST00000552483 ZNF287Q9HBT7 754 aa12.87□□□□□ -0.35
CNOT2-239ENST00000552483 RBPJLQ9UBG7 517 aa12.87□□□□□ -0.35
CNOT2-239ENST00000552483 TRIM17Q9Y577 477 aa12.87□□□□□ -0.35
CNOT2-239ENST00000552483 B4E1Z4 1266 aa12.86□□□□□ -0.35
CNOT2-239ENST00000552483 NDUFB10O96000 172 aa12.86□□□□□ -0.35
CNOT2-239ENST00000552483 NOVP48745 357 aa12.86□□□□□ -0.35
CNOT2-239ENST00000552483 COL9A3Q14050 684 aaPredicted RBP12.86□□□□□ -0.35
CNOT2-239ENST00000552483 IMMTQ16891 758 aaKnown RBP12.86□□□□□ -0.35
CNOT2-239ENST00000552483 FAM110CQ1W6H9 321 aa12.86□□□□□ -0.35
CNOT2-239ENST00000552483 Q3C1V9 767 aa12.86□□□□□ -0.35
CNOT2-239ENST00000552483 FAM83BQ5T0W9 1011 aa12.86□□□□□ -0.35
CNOT2-239ENST00000552483 MFSD6Q6ZSS7 791 aa12.86□□□□□ -0.35
CNOT2-239ENST00000552483 MKL1Q969V6 931 aa12.86□□□□□ -0.35
CNOT2-239ENST00000552483 CHMP4CQ96CF2 233 aa12.86□□□□□ -0.35
CNOT2-239ENST00000552483 TRIM47Q96LD4 638 aa12.86□□□□□ -0.35
CNOT2-239ENST00000552483 ZKSCAN3Q9BRR0 538 aa12.86□□□□□ -0.35
CNOT2-239ENST00000552483 FBXO28Q9NVF7 368 aa12.86□□□□□ -0.35
CNOT2-239ENST00000552483 MORF4L1Q9UBU8 362 aa12.86□□□□□ -0.35
CNOT2-239ENST00000552483 RBM8AQ9Y5S9 174 aaKnown RBP12.86□□□□□ -0.35
CNOT2-239ENST00000552483 F5H6K3 240 aa12.85□□□□□ -0.35
CNOT2-239ENST00000552483 WDR46O15213 610 aaKnown RBP12.85□□□□□ -0.35
CNOT2-239ENST00000552483 RAD21O60216 631 aa12.85□□□□□ -0.35
CNOT2-239ENST00000552483 KDM4AO75164 1064 aa12.85□□□□□ -0.35
CNOT2-239ENST00000552483 TTLL1O95922 423 aa12.85□□□□□ -0.35
CNOT2-239ENST00000552483 PSMC4P43686 418 aa12.85□□□□□ -0.35
CNOT2-239ENST00000552483 KLRC3Q07444 240 aa12.85□□□□□ -0.35
CNOT2-239ENST00000552483 RCSD1Q6JBY9 416 aa12.85□□□□□ -0.35
CNOT2-239ENST00000552483 LPAR1Q92633 364 aa12.85□□□□□ -0.35
CNOT2-239ENST00000552483 ATG4CQ96DT6 458 aa12.85□□□□□ -0.35
CNOT2-239ENST00000552483 PAGR1Q9BTK6 254 aa12.85□□□□□ -0.35
CNOT2-239ENST00000552483 TANGO6Q9C0B7 1094 aa12.85□□□□□ -0.35
CNOT2-239ENST00000552483 SH2D4AQ9H788 454 aa12.85□□□□□ -0.35
CNOT2-239ENST00000552483 EFCC1Q9HA90 598 aa12.85□□□□□ -0.35
CNOT2-239ENST00000552483 BTBD7Q9P203 1132 aa12.85□□□□□ -0.35
CNOT2-239ENST00000552483 CTNNA3Q9UI47 895 aa12.85□□□□□ -0.35
CNOT2-239ENST00000552483 U3KPZ7 1027 aaPredicted RBP12.85□□□□□ -0.35
CNOT2-239ENST00000552483 DSG3P32926 999 aa12.84□□□□□ -0.35
CNOT2-239ENST00000552483 GCLCP48506 637 aaPredicted RBP12.84□□□□□ -0.35
CNOT2-239ENST00000552483 CYB5R4Q7L1T6 521 aa12.84□□□□□ -0.35
CNOT2-239ENST00000552483 ABHD8Q96I13 439 aa12.84□□□□□ -0.35
CNOT2-239ENST00000552483 RNF41Q9H4P4 317 aaPredicted RBP12.84□□□□□ -0.35
CNOT2-239ENST00000552483 GOPCQ9HD26 462 aa12.84□□□□□ -0.35
CNOT2-239ENST00000552483 GABRQQ9UN88 632 aa12.84□□□□□ -0.35
CNOT2-239ENST00000552483 STX8Q9UNK0 236 aa12.84□□□□□ -0.35
CNOT2-239ENST00000552483 PTPN22Q9Y2R2 807 aa12.84□□□□□ -0.35
CNOT2-239ENST00000552483 PTCH2Q9Y6C5 1203 aa12.84□□□□□ -0.35
CNOT2-239ENST00000552483 FLOT1O75955 427 aa12.83□□□□□ -0.36
CNOT2-239ENST00000552483 PCP11498 1178 aaKnown RBP12.83□□□□□ -0.36
CNOT2-239ENST00000552483 ERVK-9P63128 1117 aa12.83□□□□□ -0.36
CNOT2-239ENST00000552483 ERVK-24P63145 666 aa12.83□□□□□ -0.36
CNOT2-239ENST00000552483 SLFN13Q68D06 897 aa12.83□□□□□ -0.36
CNOT2-239ENST00000552483 FBXO46Q6PJ61 603 aaPredicted RBP12.83□□□□□ -0.36
CNOT2-239ENST00000552483 SAMD1Q6SPF0 538 aaPredicted RBP12.83□□□□□ -0.36
CNOT2-239ENST00000552483 LBX2Q6XYB7 198 aa12.83□□□□□ -0.36
CNOT2-239ENST00000552483 GMCL1P1Q8NEA9 526 aa12.83□□□□□ -0.36
CNOT2-239ENST00000552483 TMEM47Q9BQJ4 181 aa12.83□□□□□ -0.36
CNOT2-239ENST00000552483 PORCNQ9H237 461 aa12.83□□□□□ -0.36
CNOT2-239ENST00000552483 ANO2Q9NQ90 1003 aa12.83□□□□□ -0.36
CNOT2-239ENST00000552483 TCP11L1Q9NUJ3 509 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms