RNA–Protein interactions for RNA: ENST00000550070.6

ERBB3-214, Transcript of erb-b2 receptor tyrosine kinase 3, humanhuman

TSL 1 (best)

Gene ERBB3, Length 2,729 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB3-214ENST00000550070 PUF60Q9UHX1 559 aaKnown RBP11.67□□□□□ -0.54
ERBB3-214ENST00000550070 ZBTB1Q9Y2K1 713 aa11.67□□□□□ -0.54
ERBB3-214ENST00000550070 PNPLA7Q6ZV29 1317 aa11.67□□□□□ -0.54
ERBB3-214ENST00000550070 hCG_1642624A0A1W2PR95 340 aa11.67□□□□□ -0.54
ERBB3-214ENST00000550070 TRIM75PA6NK02 468 aa11.67□□□□□ -0.54
ERBB3-214ENST00000550070 PPP1R3GB7ZBB8 358 aa11.67□□□□□ -0.54
ERBB3-214ENST00000550070 NPM3O75607 178 aaKnown RBP11.67□□□□□ -0.54
ERBB3-214ENST00000550070 CYP19A1P11511 503 aaPredicted RBP11.67□□□□□ -0.54
ERBB3-214ENST00000550070 CASP14P31944 242 aa11.67□□□□□ -0.54
ERBB3-214ENST00000550070 CHMP4BP1P59074 171 aa11.67□□□□□ -0.54
ERBB3-214ENST00000550070 PKN1Q16512 942 aa11.67□□□□□ -0.54
ERBB3-214ENST00000550070 LONRF2Q1L5Z9 754 aa11.67□□□□□ -0.54
ERBB3-214ENST00000550070 SRGAP1Q7Z6B7 1085 aa11.67□□□□□ -0.54
ERBB3-214ENST00000550070 SYMPKQ92797 1274 aaKnown RBP11.67□□□□□ -0.54
ERBB3-214ENST00000550070 NACAP1Q9BZK3 213 aa11.67□□□□□ -0.54
ERBB3-214ENST00000550070 MYH8P13535 1937 aa11.66□□□□□ -0.54
ERBB3-214ENST00000550070 NUTM2BA6NNL0 878 aaPredicted RBP11.66□□□□□ -0.54
ERBB3-214ENST00000550070 NUTM2EB1AL46 878 aaPredicted RBP11.66□□□□□ -0.54
ERBB3-214ENST00000550070 MFAP3LO75121 409 aa11.66□□□□□ -0.54
ERBB3-214ENST00000550070 COBLO75128 1261 aa11.66□□□□□ -0.54
ERBB3-214ENST00000550070 PRDM1O75626 825 aa11.66□□□□□ -0.54
ERBB3-214ENST00000550070 GNAT2P19087 354 aa11.66□□□□□ -0.54
ERBB3-214ENST00000550070 BCAMP50895 628 aa11.66□□□□□ -0.54
ERBB3-214ENST00000550070 GYS2P54840 703 aa11.66□□□□□ -0.54
ERBB3-214ENST00000550070 IRX5P78411 483 aaPredicted RBP11.66□□□□□ -0.54
ERBB3-214ENST00000550070 MAP2K1Q02750 393 aaPredicted RBP11.66□□□□□ -0.54
ERBB3-214ENST00000550070 DPYDQ12882 1025 aa11.66□□□□□ -0.54
ERBB3-214ENST00000550070 SEC23AQ15436 765 aa11.66□□□□□ -0.54
ERBB3-214ENST00000550070 RASGRP2Q7LDG7 609 aa11.66□□□□□ -0.54
ERBB3-214ENST00000550070 APBB1IPQ7Z5R6 666 aaPredicted RBP11.66□□□□□ -0.54
ERBB3-214ENST00000550070 NAA15Q9BXJ9 866 aaKnown RBP11.66□□□□□ -0.54
ERBB3-214ENST00000550070 ANKZF1Q9H8Y5 726 aa11.66□□□□□ -0.54
ERBB3-214ENST00000550070 LRP5O75197 1615 aa11.66□□□□□ -0.54
ERBB3-214ENST00000550070 CCDC151A5D8V7 595 aa11.66□□□□□ -0.54
ERBB3-214ENST00000550070 ADAMTS2O95450 1211 aa11.66□□□□□ -0.54
ERBB3-214ENST00000550070 ABL1P00519 1130 aa11.66□□□□□ -0.54
ERBB3-214ENST00000550070 FXR1P51114 621 aaKnown RBP eCLIP11.66□□□□□ -0.54
ERBB3-214ENST00000550070 PPARAQ07869 468 aa11.66□□□□□ -0.54
ERBB3-214ENST00000550070 SLC20A2Q08357 652 aa11.66□□□□□ -0.54
ERBB3-214ENST00000550070 NOM1Q5C9Z4 860 aaKnown RBP11.66□□□□□ -0.54
ERBB3-214ENST00000550070 CT47A1Q5JQC4 288 aaPredicted RBP11.66□□□□□ -0.54
ERBB3-214ENST00000550070 ZNF569Q5MCW4 686 aa11.66□□□□□ -0.54
ERBB3-214ENST00000550070 STAMQ92783 540 aa11.66□□□□□ -0.54
ERBB3-214ENST00000550070 MTA3Q9BTC8 594 aa11.66□□□□□ -0.54
ERBB3-214ENST00000550070 PHF20Q9BVI0 1012 aa11.66□□□□□ -0.54
ERBB3-214ENST00000550070 RNF26Q9BY78 433 aaPredicted RBP11.66□□□□□ -0.54
ERBB3-214ENST00000550070 CDC23Q9UJX2 597 aa11.66□□□□□ -0.54
ERBB3-214ENST00000550070 SLIT2O94813 1529 aa11.66□□□□□ -0.54
ERBB3-214ENST00000550070 ITGB4P16144 1822 aa11.66□□□□□ -0.54
ERBB3-214ENST00000550070 TNKSO95271 1327 aa11.66□□□□□ -0.54
ERBB3-214ENST00000550070 GOLGB1Q14789 3259 aaKnown RBP11.66□□□□□ -0.54
ERBB3-214ENST00000550070 H3BQF6 201 aa11.66□□□□□ -0.54
ERBB3-214ENST00000550070 MAP2K7O14733 419 aa11.66□□□□□ -0.54
ERBB3-214ENST00000550070 TFRCP02786 760 aaKnown RBP11.66□□□□□ -0.54
ERBB3-214ENST00000550070 GYPCP04921 128 aa11.66□□□□□ -0.54
ERBB3-214ENST00000550070 RCAN1P53805 252 aa11.66□□□□□ -0.54
ERBB3-214ENST00000550070 EVA1CP58658 441 aa11.66□□□□□ -0.54
ERBB3-214ENST00000550070 JAKMIP3Q5VZ66 844 aa11.66□□□□□ -0.54
ERBB3-214ENST00000550070 DNAJC14Q6Y2X3 702 aaPredicted RBP11.66□□□□□ -0.54
ERBB3-214ENST00000550070 SDR42E1Q8WUS8 393 aa11.66□□□□□ -0.54
ERBB3-214ENST00000550070 UBAC1Q9BSL1 405 aa11.66□□□□□ -0.54
ERBB3-214ENST00000550070 MINDY4BA8MYZ0 360 aa11.65□□□□□ -0.54
ERBB3-214ENST00000550070 KIF5CO60282 957 aa11.65□□□□□ -0.54
ERBB3-214ENST00000550070 KRT2P35908 639 aa11.65□□□□□ -0.54
ERBB3-214ENST00000550070 FUT2Q10981 343 aa11.65□□□□□ -0.54
ERBB3-214ENST00000550070 BRD3Q15059 726 aa11.65□□□□□ -0.54
ERBB3-214ENST00000550070 ADGRA1Q86SQ6 560 aa11.65□□□□□ -0.54
ERBB3-214ENST00000550070 GSDMAQ96QA5 445 aa11.65□□□□□ -0.54
ERBB3-214ENST00000550070 MYH2Q9UKX2 1941 aa11.65□□□□□ -0.55
ERBB3-214ENST00000550070 TULP2O00295 520 aa11.65□□□□□ -0.55
ERBB3-214ENST00000550070 ZNF174Q15697 407 aa11.65□□□□□ -0.55
ERBB3-214ENST00000550070 ZNF34Q8IZ26 560 aa11.65□□□□□ -0.55
ERBB3-214ENST00000550070 ACRBPQ8NEB7 543 aa11.65□□□□□ -0.55
ERBB3-214ENST00000550070 CTAGE1Q96RT6 745 aa11.65□□□□□ -0.55
ERBB3-214ENST00000550070 PNKPQ96T60 521 aa11.65□□□□□ -0.55
ERBB3-214ENST00000550070 RNF41Q9H4P4 317 aaPredicted RBP11.65□□□□□ -0.55
ERBB3-214ENST00000550070 ROBO1Q9Y6N7 1651 aa11.64□□□□□ -0.55
ERBB3-214ENST00000550070 SRCAPQ6ZRS2 3230 aa11.64□□□□□ -0.55
ERBB3-214ENST00000550070 RNF225M0QZC1 329 aaPredicted RBP11.64□□□□□ -0.55
ERBB3-214ENST00000550070 PLEKHA8P1O95397 391 aa11.64□□□□□ -0.55
ERBB3-214ENST00000550070 CCT6AP40227 531 aaKnown RBP11.64□□□□□ -0.55
ERBB3-214ENST00000550070 AKAP17AQ02040 695 aaKnown RBP11.64□□□□□ -0.55
ERBB3-214ENST00000550070 BEND6Q5SZJ8 279 aaPredicted RBP11.64□□□□□ -0.55
ERBB3-214ENST00000550070 DZIP3Q86Y13 1208 aaKnown RBP11.64□□□□□ -0.55
ERBB3-214ENST00000550070 SLC35F6Q8N357 371 aa11.64□□□□□ -0.55
ERBB3-214ENST00000550070 TXLNBQ8N3L3 684 aa11.64□□□□□ -0.55
ERBB3-214ENST00000550070 CDC5LQ99459 802 aaKnown RBP11.64□□□□□ -0.55
ERBB3-214ENST00000550070 LRP2BPQ9P2M1 347 aa11.64□□□□□ -0.55
ERBB3-214ENST00000550070 CTNND2Q9UQB3 1225 aa11.64□□□□□ -0.55
ERBB3-214ENST00000550070 ZBTB12Q9Y330 459 aaPredicted RBP11.64□□□□□ -0.55
ERBB3-214ENST00000550070 V9GY48 417 aaPredicted RBP11.64□□□□□ -0.55
ERBB3-214ENST00000550070 KAT6BQ8WYB5 2073 aa11.64□□□□□ -0.55
ERBB3-214ENST00000550070 SEMA3EO15041 775 aa11.64□□□□□ -0.55
ERBB3-214ENST00000550070 XBP1P17861 261 aa11.64□□□□□ -0.55
ERBB3-214ENST00000550070 FECHP22830 423 aa11.64□□□□□ -0.55
ERBB3-214ENST00000550070 CDC25AP30304 524 aa11.64□□□□□ -0.55
ERBB3-214ENST00000550070 ERVK-24P63145 666 aa11.64□□□□□ -0.55
ERBB3-214ENST00000550070 KIF4BQ2VIQ3 1234 aa11.64□□□□□ -0.55
ERBB3-214ENST00000550070 FILIP1LQ4L180 1135 aa11.64□□□□□ -0.55
ERBB3-214ENST00000550070 CEP112Q8N8E3 955 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms