RNA–Protein interactions for RNA: ENST00000546735.5

TROAP-203, Transcript of trophinin associated protein, humanhuman

TSL 1 (best)

Gene TROAP, Length 1,213 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TROAP-203ENST00000546735 CAPN2P17655 700 aa17.22■□□□□ 0.35
TROAP-203ENST00000546735 PTPREP23469 700 aa17.22■□□□□ 0.35
TROAP-203ENST00000546735 ICA1Q05084 483 aa17.22■□□□□ 0.35
TROAP-203ENST00000546735 CTR9Q6PD62 1173 aa17.22■□□□□ 0.35
TROAP-203ENST00000546735 SPICE1Q8N0Z3 855 aa17.22■□□□□ 0.35
TROAP-203ENST00000546735 ANKLE1Q8NAG6 615 aa17.22■□□□□ 0.35
TROAP-203ENST00000546735 OGDHLQ9ULD0 1010 aa17.22■□□□□ 0.35
TROAP-203ENST00000546735 COG2Q14746 738 aa17.21■□□□□ 0.35
TROAP-203ENST00000546735 SAMD1Q6SPF0 538 aaPredicted RBP17.21■□□□□ 0.35
TROAP-203ENST00000546735 C16orf86Q6ZW13 317 aa17.21■□□□□ 0.35
TROAP-203ENST00000546735 AMOTL1Q8IY63 956 aa17.21■□□□□ 0.35
TROAP-203ENST00000546735 TRMT44Q8IYL2 757 aaKnown RBP17.21■□□□□ 0.35
TROAP-203ENST00000546735 STK11IPQ8N1F8 1099 aa17.21■□□□□ 0.35
TROAP-203ENST00000546735 ARHGEF10LQ9HCE6 1279 aa17.21■□□□□ 0.35
TROAP-203ENST00000546735 TMX2Q9Y320 296 aa17.21■□□□□ 0.35
TROAP-203ENST00000546735 BAZ2AQ9UIF9 1905 aaKnown RBP17.2■□□□□ 0.34
TROAP-203ENST00000546735 SLC15A5A6NIM6 579 aa17.2■□□□□ 0.34
TROAP-203ENST00000546735 GLRX3O76003 335 aaKnown RBP17.2■□□□□ 0.34
TROAP-203ENST00000546735 ATP2B2Q01814 1243 aa17.2■□□□□ 0.34
TROAP-203ENST00000546735 C7orf61Q8IZ16 206 aa17.2■□□□□ 0.34
TROAP-203ENST00000546735 KBTBD3Q8NAB2 608 aa17.2■□□□□ 0.34
TROAP-203ENST00000546735 NPLOC4Q8TAT6 608 aa17.2■□□□□ 0.34
TROAP-203ENST00000546735 DDRGK1Q96HY6 314 aa17.2■□□□□ 0.34
TROAP-203ENST00000546735 STRBPQ96SI9 672 aaKnown RBP17.2■□□□□ 0.34
TROAP-203ENST00000546735 MOV10L1Q9BXT6 1211 aaKnown RBP17.2■□□□□ 0.34
TROAP-203ENST00000546735 NBPF3Q9H094 633 aa17.2■□□□□ 0.34
TROAP-203ENST00000546735 C11orf49Q9H6J7 331 aa17.2■□□□□ 0.34
TROAP-203ENST00000546735 VCPKMTQ9H867 229 aa17.2■□□□□ 0.34
TROAP-203ENST00000546735 PCDHB15Q9Y5E8 787 aa17.2■□□□□ 0.34
TROAP-203ENST00000546735 IVNS1ABPQ9Y6Y0 642 aa17.2■□□□□ 0.34
TROAP-203ENST00000546735 CEP290O15078 2479 aa17.19■□□□□ 0.34
TROAP-203ENST00000546735 FLOT1O75955 427 aa17.19■□□□□ 0.34
TROAP-203ENST00000546735 EEF2P13639 858 aaKnown RBP17.19■□□□□ 0.34
TROAP-203ENST00000546735 DSG3P32926 999 aa17.19■□□□□ 0.34
TROAP-203ENST00000546735 GRB14Q14449 540 aa17.19■□□□□ 0.34
TROAP-203ENST00000546735 LHX8Q68G74 356 aa17.19■□□□□ 0.34
TROAP-203ENST00000546735 OSBP2Q969R2 916 aa17.19■□□□□ 0.34
TROAP-203ENST00000546735 ATG4CQ96DT6 458 aa17.19■□□□□ 0.34
TROAP-203ENST00000546735 CCDC17Q96LX7 622 aa17.19■□□□□ 0.34
TROAP-203ENST00000546735 SPATC1LQ9H0A9 340 aa17.19■□□□□ 0.34
TROAP-203ENST00000546735 PRO3102Q9H379 93 aa17.19■□□□□ 0.34
TROAP-203ENST00000546735 HOXC10Q9NYD6 342 aa17.19■□□□□ 0.34
TROAP-203ENST00000546735 GSG1L2A8MUP6 293 aa17.18■□□□□ 0.34
TROAP-203ENST00000546735 CYP2C19P33261 490 aa17.18■□□□□ 0.34
TROAP-203ENST00000546735 PLS1Q14651 629 aa17.18■□□□□ 0.34
TROAP-203ENST00000546735 LPAR1Q92633 364 aa17.18■□□□□ 0.34
TROAP-203ENST00000546735 GPATCH3Q96I76 525 aa17.18■□□□□ 0.34
TROAP-203ENST00000546735 ARPP21Q9UBL0 812 aaPredicted RBP17.18■□□□□ 0.34
TROAP-203ENST00000546735 STAP2Q9UGK3 403 aa17.18■□□□□ 0.34
TROAP-203ENST00000546735 ZMYND8Q9ULU4 1186 aaPredicted RBP17.18■□□□□ 0.34
TROAP-203ENST00000546735 MINDY4BA8MYZ0 360 aa17.17■□□□□ 0.34
TROAP-203ENST00000546735 RNF113AO15541 343 aaKnown RBP17.17■□□□□ 0.34
TROAP-203ENST00000546735 ERCC3P19447 782 aa17.17■□□□□ 0.34
TROAP-203ENST00000546735 MFSD14CQ5VZR4 134 aa17.17■□□□□ 0.34
TROAP-203ENST00000546735 OTUD7AQ8TE49 926 aaPredicted RBP17.17■□□□□ 0.34
TROAP-203ENST00000546735 APPBP2Q92624 585 aa17.17■□□□□ 0.34
TROAP-203ENST00000546735 GNL3Q9BVP2 549 aaKnown RBP eCLIP17.17■□□□□ 0.34
TROAP-203ENST00000546735 SH2D4AQ9H788 454 aa17.17■□□□□ 0.34
TROAP-203ENST00000546735 PFASO15067 1338 aa17.17■□□□□ 0.34
TROAP-203ENST00000546735 MYH7P12883 1935 aa17.16■□□□□ 0.34
TROAP-203ENST00000546735 ALPK3Q96L96 1907 aa17.16■□□□□ 0.34
TROAP-203ENST00000546735 M0R2C6 588 aa17.16■□□□□ 0.34
TROAP-203ENST00000546735 RAD21O60216 631 aa17.16■□□□□ 0.34
TROAP-203ENST00000546735 HOXC6P09630 235 aa17.16■□□□□ 0.34
TROAP-203ENST00000546735 SYN1P17600 705 aa17.16■□□□□ 0.34
TROAP-203ENST00000546735 ADORA2AP29274 412 aa17.16■□□□□ 0.34
TROAP-203ENST00000546735 CNGA1P29973 690 aa17.16■□□□□ 0.34
TROAP-203ENST00000546735 DPP9Q86TI2 863 aa17.16■□□□□ 0.34
TROAP-203ENST00000546735 NCAPG2Q86XI2 1143 aa17.16■□□□□ 0.34
TROAP-203ENST00000546735 EPB41L4AQ9HCS5 686 aaPredicted RBP17.16■□□□□ 0.34
TROAP-203ENST00000546735 FBXO28Q9NVF7 368 aa17.16■□□□□ 0.34
TROAP-203ENST00000546735 WDR46O15213 610 aaKnown RBP17.15■□□□□ 0.34
TROAP-203ENST00000546735 GPAA1O43292 621 aa17.15■□□□□ 0.34
TROAP-203ENST00000546735 SBK1Q52WX2 424 aa17.15■□□□□ 0.34
TROAP-203ENST00000546735 TRPV1Q8NER1 839 aa17.15■□□□□ 0.34
TROAP-203ENST00000546735 KANSL2Q9H9L4 492 aa17.15■□□□□ 0.34
TROAP-203ENST00000546735 TRIOBPQ9H2D6 2365 aa17.15■□□□□ 0.34
TROAP-203ENST00000546735 MYH8P13535 1937 aa17.14■□□□□ 0.33
TROAP-203ENST00000546735 RLFQ13129 1914 aa17.14■□□□□ 0.33
TROAP-203ENST00000546735 A0A0G2JMZ2 1700 aa17.14■□□□□ 0.33
TROAP-203ENST00000546735 COBLO75128 1261 aa17.14■□□□□ 0.33
TROAP-203ENST00000546735 COL6A1P12109 1028 aa17.14■□□□□ 0.33
TROAP-203ENST00000546735 RASA1P20936 1047 aa17.14■□□□□ 0.33
TROAP-203ENST00000546735 TMEM132BQ14DG7 1078 aa17.14■□□□□ 0.33
TROAP-203ENST00000546735 FAM83BQ5T0W9 1011 aa17.14■□□□□ 0.33
TROAP-203ENST00000546735 MB21D1Q8N884 522 aa17.14■□□□□ 0.33
TROAP-203ENST00000546735 SHCBP1Q8NEM2 672 aa17.14■□□□□ 0.33
TROAP-203ENST00000546735 PI4K2BQ8TCG2 481 aa17.14■□□□□ 0.33
TROAP-203ENST00000546735 SEC62Q99442 399 aaKnown RBP17.14■□□□□ 0.33
TROAP-203ENST00000546735 MKNK2Q9HBH9 465 aa17.14■□□□□ 0.33
TROAP-203ENST00000546735 PRDM1O75626 825 aa17.13■□□□□ 0.33
TROAP-203ENST00000546735 IGHA2P01877 340 aa17.13■□□□□ 0.33
TROAP-203ENST00000546735 APPP05067 770 aa17.13■□□□□ 0.33
TROAP-203ENST00000546735 TDO2P48775 406 aa17.13■□□□□ 0.33
TROAP-203ENST00000546735 RRP1P56182 461 aaKnown RBP17.13■□□□□ 0.33
TROAP-203ENST00000546735 NUP88Q99567 741 aaPredicted RBP17.13■□□□□ 0.33
TROAP-203ENST00000546735 DDX20Q9UHI6 824 aaKnown RBP17.13■□□□□ 0.33
TROAP-203ENST00000546735 STRNO43815 780 aa17.12■□□□□ 0.33
TROAP-203ENST00000546735 ZFYP08048 801 aaPredicted RBP17.12■□□□□ 0.33
TROAP-203ENST00000546735 CYBAP13498 195 aa17.12■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 111.5 ms