RNA–Protein interactions for RNA: ENST00000544691.6

SDR39U1-203, Transcript of short chain dehydrogenase/reductase family 39U member 1, humanhuman

TSL 1 (best)

Gene SDR39U1, Length 1,507 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDR39U1-203ENST00000544691 STX8Q9UNK0 236 aa22.84■■□□□ 1.25
SDR39U1-203ENST00000544691 IRX3P78415 501 aaPredicted RBP22.83■■□□□ 1.25
SDR39U1-203ENST00000544691 PABPC4Q13310 644 aaKnown RBP eCLIP22.83■■□□□ 1.25
SDR39U1-203ENST00000544691 NOM1Q5C9Z4 860 aaKnown RBP22.83■■□□□ 1.25
SDR39U1-203ENST00000544691 SMCR8Q8TEV9 937 aaPredicted RBP22.83■■□□□ 1.25
SDR39U1-203ENST00000544691 PNMA3Q9UL41 463 aa22.83■■□□□ 1.25
SDR39U1-203ENST00000544691 MYH4Q9Y623 1939 aa22.83■■□□□ 1.24
SDR39U1-203ENST00000544691 RAD21O60216 631 aa22.82■■□□□ 1.24
SDR39U1-203ENST00000544691 C17orf99Q6UX52 265 aa22.82■■□□□ 1.24
SDR39U1-203ENST00000544691 STOX1Q6ZVD7 989 aa22.82■■□□□ 1.24
SDR39U1-203ENST00000544691 LPAR1Q92633 364 aa22.82■■□□□ 1.24
SDR39U1-203ENST00000544691 MKL1Q969V6 931 aa22.82■■□□□ 1.24
SDR39U1-203ENST00000544691 ZKSCAN3Q9BRR0 538 aa22.82■■□□□ 1.24
SDR39U1-203ENST00000544691 GOPCQ9HD26 462 aa22.82■■□□□ 1.24
SDR39U1-203ENST00000544691 NECTIN1Q15223 517 aa22.82■■□□□ 1.24
SDR39U1-203ENST00000544691 P2RX7Q99572 595 aaKnown RBP22.82■■□□□ 1.24
SDR39U1-203ENST00000544691 GTF3C3Q9Y5Q9 886 aa22.82■■□□□ 1.24
SDR39U1-203ENST00000544691 USP17L15C9J2P7 530 aa22.81■■□□□ 1.24
SDR39U1-203ENST00000544691 USP17L13C9JLJ4 530 aa22.81■■□□□ 1.24
SDR39U1-203ENST00000544691 USP17L11C9JVI0 530 aa22.81■■□□□ 1.24
SDR39U1-203ENST00000544691 USP17L18D6R9N7 530 aa22.81■■□□□ 1.24
SDR39U1-203ENST00000544691 USP17L22D6RA61 530 aa22.81■■□□□ 1.24
SDR39U1-203ENST00000544691 USP17L17D6RBQ6 530 aa22.81■■□□□ 1.24
SDR39U1-203ENST00000544691 USP17L19D6RCP7 530 aa22.81■■□□□ 1.24
SDR39U1-203ENST00000544691 USP17L20D6RJB6 530 aa22.81■■□□□ 1.24
SDR39U1-203ENST00000544691 E7EWF7 191 aa22.81■■□□□ 1.24
SDR39U1-203ENST00000544691 F5H6K3 240 aa22.81■■□□□ 1.24
SDR39U1-203ENST00000544691 SLC27A2O14975 620 aa22.81■■□□□ 1.24
SDR39U1-203ENST00000544691 FKTNO75072 461 aa22.81■■□□□ 1.24
SDR39U1-203ENST00000544691 OSBPP22059 807 aa22.81■■□□□ 1.24
SDR39U1-203ENST00000544691 KLRC3Q07444 240 aa22.81■■□□□ 1.24
SDR39U1-203ENST00000544691 USP17L24Q0WX57 530 aa22.81■■□□□ 1.24
SDR39U1-203ENST00000544691 CATSPERGQ6ZRH7 1159 aa22.81■■□□□ 1.24
SDR39U1-203ENST00000544691 CNNM2Q9H8M5 875 aa22.81■■□□□ 1.24
SDR39U1-203ENST00000544691 TCP11L1Q9NUJ3 509 aa22.81■■□□□ 1.24
SDR39U1-203ENST00000544691 ZSWIM5Q9P217 1185 aa22.81■■□□□ 1.24
SDR39U1-203ENST00000544691 PEX10O60683 326 aa22.8■■□□□ 1.24
SDR39U1-203ENST00000544691 NDUFB10O96000 172 aa22.8■■□□□ 1.24
SDR39U1-203ENST00000544691 BCRP11274 1271 aa22.8■■□□□ 1.24
SDR39U1-203ENST00000544691 NOVP48745 357 aa22.8■■□□□ 1.24
SDR39U1-203ENST00000544691 CAP1Q01518 475 aa22.8■■□□□ 1.24
SDR39U1-203ENST00000544691 SP3Q02447 781 aa22.8■■□□□ 1.24
SDR39U1-203ENST00000544691 COL13A1Q5TAT6 717 aaPredicted RBP22.8■■□□□ 1.24
SDR39U1-203ENST00000544691 CREB3L3Q68CJ9 461 aa22.8■■□□□ 1.24
SDR39U1-203ENST00000544691 NUP88Q99567 741 aaPredicted RBP22.8■■□□□ 1.24
SDR39U1-203ENST00000544691 KRT23Q9C075 422 aa22.8■■□□□ 1.24
SDR39U1-203ENST00000544691 TANGO6Q9C0B7 1094 aa22.8■■□□□ 1.24
SDR39U1-203ENST00000544691 HERVK_113P62684 666 aa22.79■■□□□ 1.24
SDR39U1-203ENST00000544691 RCSD1Q6JBY9 416 aa22.79■■□□□ 1.24
SDR39U1-203ENST00000544691 POTEEQ6S8J3 1075 aa22.79■■□□□ 1.24
SDR39U1-203ENST00000544691 ANKRD13CQ8N6S4 541 aa22.79■■□□□ 1.24
SDR39U1-203ENST00000544691 WDR46O15213 610 aaKnown RBP22.78■■□□□ 1.24
SDR39U1-203ENST00000544691 ECM2O94769 699 aaPredicted RBP22.78■■□□□ 1.24
SDR39U1-203ENST00000544691 FAM83BQ5T0W9 1011 aa22.78■■□□□ 1.24
SDR39U1-203ENST00000544691 CYB5R4Q7L1T6 521 aa22.78■■□□□ 1.24
SDR39U1-203ENST00000544691 RASGRP2Q7LDG7 609 aa22.78■■□□□ 1.24
SDR39U1-203ENST00000544691 CD99L2Q8TCZ2 262 aa22.78■■□□□ 1.24
SDR39U1-203ENST00000544691 CHMP4CQ96CF2 233 aa22.78■■□□□ 1.24
SDR39U1-203ENST00000544691 SYNPO2Q9UMS6 1093 aa22.78■■□□□ 1.24
SDR39U1-203ENST00000544691 TRDNQ13061 729 aa22.77■■□□□ 1.24
SDR39U1-203ENST00000544691 COL9A3Q14050 684 aaPredicted RBP22.77■■□□□ 1.24
SDR39U1-203ENST00000544691 PPP4R3BQ5MIZ7 849 aa22.77■■□□□ 1.24
SDR39U1-203ENST00000544691 IQCA1Q86XH1 822 aa22.77■■□□□ 1.24
SDR39U1-203ENST00000544691 GMCL1P1Q8NEA9 526 aa22.77■■□□□ 1.24
SDR39U1-203ENST00000544691 TMEM47Q9BQJ4 181 aa22.77■■□□□ 1.24
SDR39U1-203ENST00000544691 ARHGAP39Q9C0H5 1083 aa22.77■■□□□ 1.24
SDR39U1-203ENST00000544691 TXNRD2Q9NNW7 524 aa22.77■■□□□ 1.24
SDR39U1-203ENST00000544691 FBXO28Q9NVF7 368 aa22.77■■□□□ 1.24
SDR39U1-203ENST00000544691 SPDYE16A6NNV3 312 aaPredicted RBP22.76■■□□□ 1.23
SDR39U1-203ENST00000544691 FLOT1O75955 427 aa22.76■■□□□ 1.23
SDR39U1-203ENST00000544691 REC8O95072 547 aa22.76■■□□□ 1.23
SDR39U1-203ENST00000544691 GCLCP48506 637 aaPredicted RBP22.76■■□□□ 1.23
SDR39U1-203ENST00000544691 NT5C2P49902 561 aa22.76■■□□□ 1.23
SDR39U1-203ENST00000544691 RALYLQ86SE5 291 aaKnown RBP22.76■■□□□ 1.23
SDR39U1-203ENST00000544691 NCOA7Q8NI08 942 aa22.76■■□□□ 1.23
SDR39U1-203ENST00000544691 ZSCAN10Q96SZ4 725 aaPredicted RBP22.76■■□□□ 1.23
SDR39U1-203ENST00000544691 MTMR7Q9Y216 660 aa22.76■■□□□ 1.23
SDR39U1-203ENST00000544691 ZSWIM8A7E2V4 1837 aa22.76■■□□□ 1.23
SDR39U1-203ENST00000544691 TNKSO95271 1327 aa22.75■■□□□ 1.23
SDR39U1-203ENST00000544691 TOP1P11387 765 aaKnown RBP22.75■■□□□ 1.23
SDR39U1-203ENST00000544691 CTGFP29279 349 aa22.75■■□□□ 1.23
SDR39U1-203ENST00000544691 LACTBP83111 547 aaPredicted RBP22.75■■□□□ 1.23
SDR39U1-203ENST00000544691 FAM110CQ1W6H9 321 aa22.75■■□□□ 1.23
SDR39U1-203ENST00000544691 SLFN13Q68D06 897 aa22.75■■□□□ 1.23
SDR39U1-203ENST00000544691 SAMD1Q6SPF0 538 aaPredicted RBP22.75■■□□□ 1.23
SDR39U1-203ENST00000544691 RASEFQ8IZ41 740 aa22.75■■□□□ 1.23
SDR39U1-203ENST00000544691 ENAHQ8N8S7 591 aaPredicted RBP22.75■■□□□ 1.23
SDR39U1-203ENST00000544691 RBPJLQ9UBG7 517 aa22.75■■□□□ 1.23
SDR39U1-203ENST00000544691 RLFQ13129 1914 aa22.75■■□□□ 1.23
SDR39U1-203ENST00000544691 COG2Q14746 738 aa22.74■■□□□ 1.23
SDR39U1-203ENST00000544691 RNF20Q5VTR2 975 aa22.74■■□□□ 1.23
SDR39U1-203ENST00000544691 CHST3Q7LGC8 479 aa22.74■■□□□ 1.23
SDR39U1-203ENST00000544691 MB21D2Q8IYB1 491 aaPredicted RBP22.74■■□□□ 1.23
SDR39U1-203ENST00000544691 ERO1AQ96HE7 468 aa22.74■■□□□ 1.23
SDR39U1-203ENST00000544691 TTC14Q96N46 770 aa22.74■■□□□ 1.23
SDR39U1-203ENST00000544691 UBAC1Q9BSL1 405 aa22.74■■□□□ 1.23
SDR39U1-203ENST00000544691 PAGR1Q9BTK6 254 aa22.74■■□□□ 1.23
SDR39U1-203ENST00000544691 MCCP23508 829 aa22.73■■□□□ 1.23
SDR39U1-203ENST00000544691 ANTXR2P58335 489 aa22.73■■□□□ 1.23
SDR39U1-203ENST00000544691 DGKHQ86XP1 1220 aa22.73■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 92.4 ms