RNA–Protein interactions for RNA: ENST00000543982.5

XRCC1-202, Transcript of X-ray repair cross complementing 1, humanhuman

TSL 2 BASIC

Gene XRCC1, Length 1,994 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1-202ENST00000543982 USP2O75604 605 aaPredicted RBP18.6■□□□□ 0.57
XRCC1-202ENST00000543982 ICA1Q05084 483 aa18.6■□□□□ 0.57
XRCC1-202ENST00000543982 SRBD1Q8N5C6 995 aaKnown RBP18.6■□□□□ 0.57
XRCC1-202ENST00000543982 AIFM3Q96NN9 605 aa18.6■□□□□ 0.57
XRCC1-202ENST00000543982 GJB4Q9NTQ9 266 aa18.6■□□□□ 0.57
XRCC1-202ENST00000543982 NYAP2Q9P242 653 aa18.6■□□□□ 0.57
XRCC1-202ENST00000543982 hCG_1642624A0A1W2PR95 340 aa18.59■□□□□ 0.57
XRCC1-202ENST00000543982 TRAF5O00463 557 aa18.59■□□□□ 0.57
XRCC1-202ENST00000543982 FOSBP53539 338 aa18.59■□□□□ 0.57
XRCC1-202ENST00000543982 NFKBIBQ15653 356 aa18.59■□□□□ 0.57
XRCC1-202ENST00000543982 MOB2Q70IA6 237 aa18.59■□□□□ 0.57
XRCC1-202ENST00000543982 MKL1Q969V6 931 aa18.59■□□□□ 0.57
XRCC1-202ENST00000543982 LLPHQ9BRT6 129 aaKnown RBP18.59■□□□□ 0.57
XRCC1-202ENST00000543982 VEGFAP15692 232 aaPredicted RBP18.59■□□□□ 0.57
XRCC1-202ENST00000543982 NBR1Q14596 966 aa18.59■□□□□ 0.57
XRCC1-202ENST00000543982 GRM4Q14833 912 aa18.59■□□□□ 0.57
XRCC1-202ENST00000543982 FOXD4L5Q5VV16 416 aaPredicted RBP18.59■□□□□ 0.57
XRCC1-202ENST00000543982 FOXD4L4Q8WXT5 416 aaPredicted RBP18.59■□□□□ 0.57
XRCC1-202ENST00000543982 KLRG1Q96E93 195 aa18.59■□□□□ 0.57
XRCC1-202ENST00000543982 CDCA5Q96FF9 252 aa18.59■□□□□ 0.57
XRCC1-202ENST00000543982 CABP5Q9NP86 173 aa18.59■□□□□ 0.57
XRCC1-202ENST00000543982 CLEC11AQ9Y240 323 aa18.59■□□□□ 0.57
XRCC1-202ENST00000543982 PDHBP11177 359 aa18.58■□□□□ 0.56
XRCC1-202ENST00000543982 SYT1P21579 422 aa18.58■□□□□ 0.56
XRCC1-202ENST00000543982 RCAN1P53805 252 aa18.58■□□□□ 0.56
XRCC1-202ENST00000543982 PNMA8AQ86V59 439 aaPredicted RBP18.58■□□□□ 0.56
XRCC1-202ENST00000543982 WRNIP1Q96S55 665 aa18.58■□□□□ 0.56
XRCC1-202ENST00000543982 ZNF341Q9BYN7 854 aa18.58■□□□□ 0.56
XRCC1-202ENST00000543982 FRMPD2Q68DX3 1309 aaPredicted RBP18.57■□□□□ 0.56
XRCC1-202ENST00000543982 PALM3A6NDB9 673 aaPredicted RBP18.57■□□□□ 0.56
XRCC1-202ENST00000543982 DCAF8L1A6NGE4 600 aa18.57■□□□□ 0.56
XRCC1-202ENST00000543982 CPLX1O14810 134 aa18.57■□□□□ 0.56
XRCC1-202ENST00000543982 TMTC3Q6ZXV5 915 aa18.57■□□□□ 0.56
XRCC1-202ENST00000543982 CHAMP1Q96JM3 812 aa18.57■□□□□ 0.56
XRCC1-202ENST00000543982 CYTH3O43739 400 aa18.57■□□□□ 0.56
XRCC1-202ENST00000543982 CTNND1O60716 968 aaKnown RBP18.57■□□□□ 0.56
XRCC1-202ENST00000543982 IFNAR1P17181 557 aa18.57■□□□□ 0.56
XRCC1-202ENST00000543982 NUCB2P80303 420 aa18.57■□□□□ 0.56
XRCC1-202ENST00000543982 SUPT20HL1Q3ZLR7 823 aa18.57■□□□□ 0.56
XRCC1-202ENST00000543982 DCAF15Q66K64 600 aa18.57■□□□□ 0.56
XRCC1-202ENST00000543982 OTUD7BQ6GQQ9 843 aa18.57■□□□□ 0.56
XRCC1-202ENST00000543982 TTBK2Q6IQ55 1244 aa18.57■□□□□ 0.56
XRCC1-202ENST00000543982 SHISA4Q96DD7 197 aa18.57■□□□□ 0.56
XRCC1-202ENST00000543982 ORC3Q9UBD5 711 aaPredicted RBP18.57■□□□□ 0.56
XRCC1-202ENST00000543982 SCN4AP35499 1836 aa18.56■□□□□ 0.56
XRCC1-202ENST00000543982 CALM1P0DP23 149 aa18.56■□□□□ 0.56
XRCC1-202ENST00000543982 CALM2P0DP24 149 aa18.56■□□□□ 0.56
XRCC1-202ENST00000543982 CALM3P0DP25 149 aa18.56■□□□□ 0.56
XRCC1-202ENST00000543982 SNHG28P0DPA3 235 aa18.56■□□□□ 0.56
XRCC1-202ENST00000543982 DGKZQ13574 1117 aa18.56■□□□□ 0.56
XRCC1-202ENST00000543982 NUP88Q99567 741 aaPredicted RBP18.56■□□□□ 0.56
XRCC1-202ENST00000543982 SLC26A6Q9BXS9 759 aa18.56■□□□□ 0.56
XRCC1-202ENST00000543982 PPP1R3FQ6ZSY5 799 aaPredicted RBP18.55■□□□□ 0.56
XRCC1-202ENST00000543982 DDX55Q8NHQ9 600 aaKnown RBP eCLIP18.55■□□□□ 0.56
XRCC1-202ENST00000543982 CTCFLQ8NI51 663 aaPredicted RBP18.55■□□□□ 0.56
XRCC1-202ENST00000543982 PIBF1Q8WXW3 757 aa18.55■□□□□ 0.56
XRCC1-202ENST00000543982 UBA5Q9GZZ9 404 aa18.55■□□□□ 0.56
XRCC1-202ENST00000543982 DHX16O60231 1041 aaKnown RBP18.55■□□□□ 0.56
XRCC1-202ENST00000543982 FMNL1O95466 1100 aaPredicted RBP18.55■□□□□ 0.56
XRCC1-202ENST00000543982 PKN1Q16512 942 aa18.55■□□□□ 0.56
XRCC1-202ENST00000543982 CDC37L1Q7L3B6 337 aa18.55■□□□□ 0.56
XRCC1-202ENST00000543982 SPICE1Q8N0Z3 855 aa18.55■□□□□ 0.56
XRCC1-202ENST00000543982 MAP3K14Q99558 947 aa18.55■□□□□ 0.56
XRCC1-202ENST00000543982 GPCPD1Q9NPB8 672 aa18.55■□□□□ 0.56
XRCC1-202ENST00000543982 ZBTB4Q9P1Z0 1013 aaPredicted RBP18.55■□□□□ 0.56
XRCC1-202ENST00000543982 V9GY48 417 aaPredicted RBP18.55■□□□□ 0.56
XRCC1-202ENST00000543982 MYH8P13535 1937 aa18.54■□□□□ 0.56
XRCC1-202ENST00000543982 F5H6K3 240 aa18.54■□□□□ 0.56
XRCC1-202ENST00000543982 RAD21O60216 631 aa18.54■□□□□ 0.56
XRCC1-202ENST00000543982 NDUFB10O96000 172 aa18.54■□□□□ 0.56
XRCC1-202ENST00000543982 ASNSP08243 561 aa18.54■□□□□ 0.56
XRCC1-202ENST00000543982 KLRC3Q07444 240 aa18.54■□□□□ 0.56
XRCC1-202ENST00000543982 ZYXQ15942 572 aaKnown RBP18.54■□□□□ 0.56
XRCC1-202ENST00000543982 LARP1BQ659C4 914 aaKnown RBP18.54■□□□□ 0.56
XRCC1-202ENST00000543982 KCTD1Q719H9 257 aa18.54■□□□□ 0.56
XRCC1-202ENST00000543982 MTMR6Q9Y217 621 aa18.54■□□□□ 0.56
XRCC1-202ENST00000543982 TMX2Q9Y320 296 aa18.54■□□□□ 0.56
XRCC1-202ENST00000543982 CNTNAP5Q8WYK1 1306 aa18.54■□□□□ 0.56
XRCC1-202ENST00000543982 KLRF2D3W0D1 207 aa18.53■□□□□ 0.56
XRCC1-202ENST00000543982 BRD1O95696 1058 aa18.53■□□□□ 0.56
XRCC1-202ENST00000543982 GUCY1B3Q02153 619 aa18.53■□□□□ 0.56
XRCC1-202ENST00000543982 SLFN13Q68D06 897 aa18.53■□□□□ 0.56
XRCC1-202ENST00000543982 SCYL3Q8IZE3 742 aa18.53■□□□□ 0.56
XRCC1-202ENST00000543982 CNKSR2Q8WXI2 1034 aa18.53■□□□□ 0.56
XRCC1-202ENST00000543982 RBM28Q9NW13 759 aaKnown RBP18.53■□□□□ 0.56
XRCC1-202ENST00000543982 CCDC196A0A1B0GTZ2 297 aa18.53■□□□□ 0.56
XRCC1-202ENST00000543982 PARP1P09874 1014 aaKnown RBP18.53■□□□□ 0.56
XRCC1-202ENST00000543982 PTPRAP18433 802 aa18.53■□□□□ 0.56
XRCC1-202ENST00000543982 SLC16A2P36021 539 aa18.53■□□□□ 0.56
XRCC1-202ENST00000543982 SSRP1Q08945 709 aaKnown RBP18.53■□□□□ 0.56
XRCC1-202ENST00000543982 ZNF543Q08ER8 600 aa18.53■□□□□ 0.56
XRCC1-202ENST00000543982 TNPO1Q92973 898 aaKnown RBP18.53■□□□□ 0.56
XRCC1-202ENST00000543982 STX6O43752 255 aa18.52■□□□□ 0.56
XRCC1-202ENST00000543982 HMGN5P82970 282 aaKnown RBP18.52■□□□□ 0.56
XRCC1-202ENST00000543982 PPP2R5BQ15173 497 aa18.52■□□□□ 0.56
XRCC1-202ENST00000543982 CLMNQ96JQ2 1002 aa18.52■□□□□ 0.56
XRCC1-202ENST00000543982 SNCAIPQ9Y6H5 919 aa18.52■□□□□ 0.56
XRCC1-202ENST00000543982 VGLL4Q14135 290 aa18.51■□□□□ 0.55
XRCC1-202ENST00000543982 FAM184AQ8NB25 1140 aa18.51■□□□□ 0.55
XRCC1-202ENST00000543982 GMCL1P1Q8NEA9 526 aa18.51■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms