RNA–Protein interactions for RNA: ENST00000543048.5

TNFRSF1A-214, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 5

Gene TNFRSF1A, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-214ENST00000543048 ZMYM1Q5SVZ6 1142 aa11.65□□□□□ -0.54
TNFRSF1A-214ENST00000543048 TMEM179Q6ZVK1 233 aa11.65□□□□□ -0.54
TNFRSF1A-214ENST00000543048 C16orf86Q6ZW13 317 aa11.65□□□□□ -0.54
TNFRSF1A-214ENST00000543048 CHD1LQ86WJ1 897 aa11.65□□□□□ -0.54
TNFRSF1A-214ENST00000543048 TICAM2Q86XR7 235 aa11.65□□□□□ -0.54
TNFRSF1A-214ENST00000543048 SLC44A5Q8NCS7 719 aa11.65□□□□□ -0.54
TNFRSF1A-214ENST00000543048 RAET1EQ8TD07 263 aa11.65□□□□□ -0.54
TNFRSF1A-214ENST00000543048 C12orf42Q96LP6 360 aa11.65□□□□□ -0.54
TNFRSF1A-214ENST00000543048 KIAA1683Q9H0B3 1180 aa11.65□□□□□ -0.54
TNFRSF1A-214ENST00000543048 ARPP21Q9UBL0 812 aaPredicted RBP11.65□□□□□ -0.54
TNFRSF1A-214ENST00000543048 MYH4Q9Y623 1939 aa11.64□□□□□ -0.55
TNFRSF1A-214ENST00000543048 HTTP42858 3142 aa11.64□□□□□ -0.55
TNFRSF1A-214ENST00000543048 SMIM22K7EJ46 135 aa11.64□□□□□ -0.55
TNFRSF1A-214ENST00000543048 TNRC18O15417 2968 aaPredicted RBP11.64□□□□□ -0.55
TNFRSF1A-214ENST00000543048 AKR1B1P15121 316 aa11.64□□□□□ -0.55
TNFRSF1A-214ENST00000543048 NUCB1Q02818 461 aa11.64□□□□□ -0.55
TNFRSF1A-214ENST00000543048 ZYXQ15942 572 aaKnown RBP11.64□□□□□ -0.55
TNFRSF1A-214ENST00000543048 CATSPERGQ6ZRH7 1159 aa11.64□□□□□ -0.55
TNFRSF1A-214ENST00000543048 IFNL3Q8IZI9 196 aa11.64□□□□□ -0.55
TNFRSF1A-214ENST00000543048 SEC62Q99442 399 aaKnown RBP11.64□□□□□ -0.55
TNFRSF1A-214ENST00000543048 NACAP1Q9BZK3 213 aa11.64□□□□□ -0.55
TNFRSF1A-214ENST00000543048 MKNK2Q9HBH9 465 aa11.64□□□□□ -0.55
TNFRSF1A-214ENST00000543048 MORF4L1Q9UBU8 362 aa11.64□□□□□ -0.55
TNFRSF1A-214ENST00000543048 PDE4DIPQ5VU43 2346 aa11.64□□□□□ -0.55
TNFRSF1A-214ENST00000543048 RBBP6Q7Z6E9 1792 aaKnown RBP11.64□□□□□ -0.55
TNFRSF1A-214ENST00000543048 MYPNQ86TC9 1320 aa11.63□□□□□ -0.55
TNFRSF1A-214ENST00000543048 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.63□□□□□ -0.55
TNFRSF1A-214ENST00000543048 TNPO2O14787 897 aaKnown RBP11.63□□□□□ -0.55
TNFRSF1A-214ENST00000543048 TDO2P48775 406 aa11.63□□□□□ -0.55
TNFRSF1A-214ENST00000543048 HERVK_113P62684 666 aa11.63□□□□□ -0.55
TNFRSF1A-214ENST00000543048 SIAH1Q8IUQ4 282 aa11.63□□□□□ -0.55
TNFRSF1A-214ENST00000543048 PLEKHM2Q8IWE5 1019 aa11.63□□□□□ -0.55
TNFRSF1A-214ENST00000543048 GPRC5AQ8NFJ5 357 aa11.63□□□□□ -0.55
TNFRSF1A-214ENST00000543048 GTF3C2Q8WUA4 911 aaPredicted RBP11.63□□□□□ -0.55
TNFRSF1A-214ENST00000543048 COA7Q96BR5 231 aa11.63□□□□□ -0.55
TNFRSF1A-214ENST00000543048 ZNF333Q96JL9 665 aa11.63□□□□□ -0.55
TNFRSF1A-214ENST00000543048 ZFP91Q96JP5 570 aaPredicted RBP11.63□□□□□ -0.55
TNFRSF1A-214ENST00000543048 ARHGEF10LQ9HCE6 1279 aa11.63□□□□□ -0.55
TNFRSF1A-214ENST00000543048 HELLSQ9NRZ9 838 aa11.63□□□□□ -0.55
TNFRSF1A-214ENST00000543048 RBPJLQ9UBG7 517 aa11.63□□□□□ -0.55
TNFRSF1A-214ENST00000543048 GABRQQ9UN88 632 aa11.63□□□□□ -0.55
TNFRSF1A-214ENST00000543048 A0A1W2PRG0 241 aa11.62□□□□□ -0.55
TNFRSF1A-214ENST00000543048 TRIM6-TRIM34B2RNG4 842 aa11.62□□□□□ -0.55
TNFRSF1A-214ENST00000543048 GRK4P32298 578 aa11.62□□□□□ -0.55
TNFRSF1A-214ENST00000543048 IRX6P78412 446 aaPredicted RBP11.62□□□□□ -0.55
TNFRSF1A-214ENST00000543048 PRKCZQ05513 592 aa11.62□□□□□ -0.55
TNFRSF1A-214ENST00000543048 Q3C1V9 767 aa11.62□□□□□ -0.55
TNFRSF1A-214ENST00000543048 SH3TC2Q8TF17 1288 aa11.62□□□□□ -0.55
TNFRSF1A-214ENST00000543048 OSBPL3Q9H4L5 887 aa11.62□□□□□ -0.55
TNFRSF1A-214ENST00000543048 SH2D4AQ9H788 454 aa11.62□□□□□ -0.55
TNFRSF1A-214ENST00000543048 KANSL2Q9H9L4 492 aa11.62□□□□□ -0.55
TNFRSF1A-214ENST00000543048 ZNF287Q9HBT7 754 aa11.62□□□□□ -0.55
TNFRSF1A-214ENST00000543048 HOXC10Q9NYD6 342 aa11.62□□□□□ -0.55
TNFRSF1A-214ENST00000543048 TMX2Q9Y320 296 aa11.62□□□□□ -0.55
TNFRSF1A-214ENST00000543048 RLFQ13129 1914 aa11.62□□□□□ -0.55
TNFRSF1A-214ENST00000543048 PLXNB2O15031 1838 aa11.61□□□□□ -0.55
TNFRSF1A-214ENST00000543048 ADCY3O60266 1144 aa11.61□□□□□ -0.55
TNFRSF1A-214ENST00000543048 SLC3A2P08195 630 aaKnown RBP11.61□□□□□ -0.55
TNFRSF1A-214ENST00000543048 VCAM1P19320 739 aa11.61□□□□□ -0.55
TNFRSF1A-214ENST00000543048 FLT3LGP49771 235 aa11.61□□□□□ -0.55
TNFRSF1A-214ENST00000543048 ICA1Q05084 483 aa11.61□□□□□ -0.55
TNFRSF1A-214ENST00000543048 IRF5Q13568 498 aa11.61□□□□□ -0.55
TNFRSF1A-214ENST00000543048 COG2Q14746 738 aa11.61□□□□□ -0.55
TNFRSF1A-214ENST00000543048 MCMDC2Q4G0Z9 681 aa11.61□□□□□ -0.55
TNFRSF1A-214ENST00000543048 IER5LQ5T953 404 aa11.61□□□□□ -0.55
TNFRSF1A-214ENST00000543048 ZNF444Q8N0Y2 327 aaPredicted RBP11.61□□□□□ -0.55
TNFRSF1A-214ENST00000543048 STK11IPQ8N1F8 1099 aa11.61□□□□□ -0.55
TNFRSF1A-214ENST00000543048 RILPL2Q969X0 211 aa11.61□□□□□ -0.55
TNFRSF1A-214ENST00000543048 RPAP3Q9H6T3 665 aaPredicted RBP11.61□□□□□ -0.55
TNFRSF1A-214ENST00000543048 EPB41L4AQ9HCS5 686 aaPredicted RBP11.61□□□□□ -0.55
TNFRSF1A-214ENST00000543048 TXNRD2Q9NNW7 524 aa11.61□□□□□ -0.55
TNFRSF1A-214ENST00000543048 BIN2Q9UBW5 565 aaPredicted RBP11.61□□□□□ -0.55
TNFRSF1A-214ENST00000543048 RABGAP1Q9Y3P9 1069 aa11.61□□□□□ -0.55
TNFRSF1A-214ENST00000543048 GREB1LQ9C091 1923 aaPredicted RBP11.6□□□□□ -0.55
TNFRSF1A-214ENST00000543048 POTEFA5A3E0 1075 aa11.6□□□□□ -0.55
TNFRSF1A-214ENST00000543048 SEC24BO95487 1268 aa11.6□□□□□ -0.55
TNFRSF1A-214ENST00000543048 EEF2P13639 858 aaKnown RBP11.6□□□□□ -0.55
TNFRSF1A-214ENST00000543048 RASA1P20936 1047 aa11.6□□□□□ -0.55
TNFRSF1A-214ENST00000543048 ERVK-9P63128 1117 aa11.6□□□□□ -0.55
TNFRSF1A-214ENST00000543048 ERVK-24P63145 666 aa11.6□□□□□ -0.55
TNFRSF1A-214ENST00000543048 ATP2B2Q01814 1243 aa11.6□□□□□ -0.55
TNFRSF1A-214ENST00000543048 PDE4BQ07343 736 aa11.6□□□□□ -0.55
TNFRSF1A-214ENST00000543048 CCDC129Q6ZRS4 1044 aa11.6□□□□□ -0.55
TNFRSF1A-214ENST00000543048 CCAR1Q8IX12 1150 aaKnown RBP11.6□□□□□ -0.55
TNFRSF1A-214ENST00000543048 SLAIN1Q8ND83 568 aa11.6□□□□□ -0.55
TNFRSF1A-214ENST00000543048 PXYLP1Q8TE99 480 aa11.6□□□□□ -0.55
TNFRSF1A-214ENST00000543048 LPAR1Q92633 364 aa11.6□□□□□ -0.55
TNFRSF1A-214ENST00000543048 PAGR1Q9BTK6 254 aa11.6□□□□□ -0.55
TNFRSF1A-214ENST00000543048 NAPBQ9H115 298 aa11.6□□□□□ -0.55
TNFRSF1A-214ENST00000543048 GJD2Q9UKL4 321 aa11.6□□□□□ -0.55
TNFRSF1A-214ENST00000543048 PARP14Q460N5 1801 aa11.6□□□□□ -0.55
TNFRSF1A-214ENST00000543048 COL11A1P12107 1806 aaPredicted RBP11.59□□□□□ -0.55
TNFRSF1A-214ENST00000543048 PEX10O60683 326 aa11.59□□□□□ -0.55
TNFRSF1A-214ENST00000543048 MYCP01106 439 aaPredicted RBP11.59□□□□□ -0.55
TNFRSF1A-214ENST00000543048 EN2P19622 333 aaPredicted RBP11.59□□□□□ -0.55
TNFRSF1A-214ENST00000543048 MAPK4P31152 587 aa11.59□□□□□ -0.55
TNFRSF1A-214ENST00000543048 UBXN2AP68543 259 aa11.59□□□□□ -0.55
TNFRSF1A-214ENST00000543048 ALX1Q15699 326 aa11.59□□□□□ -0.55
TNFRSF1A-214ENST00000543048 KIAA1755Q5JYT7 1200 aa11.59□□□□□ -0.55
TNFRSF1A-214ENST00000543048 LHX8Q68G74 356 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms