RNA–Protein interactions for RNA: ENST00000542641.5

YBX3-213, Transcript of Y-box binding protein 3, humanhuman

TSL 4

Gene YBX3, Length 669 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-213ENST00000542641 IGDCC4Q8TDY8 1250 aa13.62□□□□□ -0.23
YBX3-213ENST00000542641 MKL1Q969V6 931 aa13.62□□□□□ -0.23
YBX3-213ENST00000542641 TCEANC2Q96MN5 208 aa13.62□□□□□ -0.23
YBX3-213ENST00000542641 KIF2CQ99661 725 aa13.62□□□□□ -0.23
YBX3-213ENST00000542641 FEZ1Q99689 392 aa13.62□□□□□ -0.23
YBX3-213ENST00000542641 MTA3Q9BTC8 594 aa13.62□□□□□ -0.23
YBX3-213ENST00000542641 SH2D4AQ9H788 454 aa13.62□□□□□ -0.23
YBX3-213ENST00000542641 DOCK1Q14185 1865 aa13.61□□□□□ -0.23
YBX3-213ENST00000542641 MYH8P13535 1937 aa13.61□□□□□ -0.23
YBX3-213ENST00000542641 SH2B2O14492 632 aaPredicted RBP13.61□□□□□ -0.23
YBX3-213ENST00000542641 SLC10A3P09131 477 aa13.61□□□□□ -0.23
YBX3-213ENST00000542641 TOP1P11387 765 aaKnown RBP13.61□□□□□ -0.23
YBX3-213ENST00000542641 NOVP48745 357 aa13.61□□□□□ -0.23
YBX3-213ENST00000542641 BACE1P56817 501 aa13.61□□□□□ -0.23
YBX3-213ENST00000542641 SNAPC2Q13487 334 aa13.61□□□□□ -0.23
YBX3-213ENST00000542641 MTMR2Q13614 643 aa13.61□□□□□ -0.23
YBX3-213ENST00000542641 SEC23AQ15436 765 aa13.61□□□□□ -0.23
YBX3-213ENST00000542641 ZYXQ15942 572 aaKnown RBP13.61□□□□□ -0.23
YBX3-213ENST00000542641 CYP4F22Q6NT55 531 aa13.61□□□□□ -0.23
YBX3-213ENST00000542641 ANKS1AQ92625 1134 aa13.61□□□□□ -0.23
YBX3-213ENST00000542641 TMEM47Q9BQJ4 181 aa13.61□□□□□ -0.23
YBX3-213ENST00000542641 KAT14Q9H8E8 782 aa13.61□□□□□ -0.23
YBX3-213ENST00000542641 PDRG1Q9NUG6 133 aa13.61□□□□□ -0.23
YBX3-213ENST00000542641 TMX2Q9Y320 296 aa13.61□□□□□ -0.23
YBX3-213ENST00000542641 OTOFQ9HC10 1997 aa13.61□□□□□ -0.23
YBX3-213ENST00000542641 FAM155AB1AL88 458 aaPredicted RBP13.6□□□□□ -0.23
YBX3-213ENST00000542641 C19orf81C9J6K1 198 aa13.6□□□□□ -0.23
YBX3-213ENST00000542641 RAD21O60216 631 aa13.6□□□□□ -0.23
YBX3-213ENST00000542641 LIFRP42702 1097 aa13.6□□□□□ -0.23
YBX3-213ENST00000542641 NEK4P51957 841 aa13.6□□□□□ -0.23
YBX3-213ENST00000542641 GTF2A2P52657 109 aa13.6□□□□□ -0.23
YBX3-213ENST00000542641 USP14P54578 494 aa13.6□□□□□ -0.23
YBX3-213ENST00000542641 NFXL1Q6ZNB6 911 aa13.6□□□□□ -0.23
YBX3-213ENST00000542641 Q6ZUG5 572 aa13.6□□□□□ -0.23
YBX3-213ENST00000542641 LRRC47Q8N1G4 583 aaKnown RBP13.6□□□□□ -0.23
YBX3-213ENST00000542641 TMTC2Q8N394 836 aa13.6□□□□□ -0.23
YBX3-213ENST00000542641 KIAA1683Q9H0B3 1180 aa13.6□□□□□ -0.23
YBX3-213ENST00000542641 LY9Q9HBG7 655 aa13.6□□□□□ -0.23
YBX3-213ENST00000542641 GOPCQ9HD26 462 aa13.6□□□□□ -0.23
YBX3-213ENST00000542641 GPHNQ9NQX3 736 aaPredicted RBP13.6□□□□□ -0.23
YBX3-213ENST00000542641 KCNH4Q9UQ05 1017 aa13.6□□□□□ -0.23
YBX3-213ENST00000542641 A0A0G2JLL6 359 aaPredicted RBP13.59□□□□□ -0.23
YBX3-213ENST00000542641 CCDC69A6NI79 296 aa13.59□□□□□ -0.23
YBX3-213ENST00000542641 F5H6K3 240 aa13.59□□□□□ -0.23
YBX3-213ENST00000542641 HMGCS2P54868 508 aa13.59□□□□□ -0.23
YBX3-213ENST00000542641 KLRC3Q07444 240 aa13.59□□□□□ -0.23
YBX3-213ENST00000542641 RABEP1Q15276 862 aa13.59□□□□□ -0.23
YBX3-213ENST00000542641 USP17L2Q6R6M4 530 aa13.59□□□□□ -0.23
YBX3-213ENST00000542641 PRRT2Q7Z6L0 340 aaPredicted RBP13.59□□□□□ -0.23
YBX3-213ENST00000542641 CAPNS2Q96L46 248 aa13.59□□□□□ -0.23
YBX3-213ENST00000542641 VCPKMTQ9H867 229 aa13.59□□□□□ -0.23
YBX3-213ENST00000542641 SENP2Q9HC62 589 aa13.59□□□□□ -0.23
YBX3-213ENST00000542641 EMILIN3Q9NT22 766 aa13.59□□□□□ -0.23
YBX3-213ENST00000542641 TMOD4Q9NZQ9 345 aa13.59□□□□□ -0.23
YBX3-213ENST00000542641 SYNPO2Q9UMS6 1093 aa13.59□□□□□ -0.23
YBX3-213ENST00000542641 ATAD5Q96QE3 1844 aa13.59□□□□□ -0.23
YBX3-213ENST00000542641 GREB1LQ9C091 1923 aaPredicted RBP13.58□□□□□ -0.23
YBX3-213ENST00000542641 CETPP11597 493 aa13.58□□□□□ -0.24
YBX3-213ENST00000542641 NOGQ13253 232 aa13.58□□□□□ -0.24
YBX3-213ENST00000542641 DGKZQ13574 1117 aa13.58□□□□□ -0.24
YBX3-213ENST00000542641 SH3D19Q5HYK7 790 aa13.58□□□□□ -0.24
YBX3-213ENST00000542641 GADL1Q6ZQY3 521 aa13.58□□□□□ -0.24
YBX3-213ENST00000542641 FASTKD5Q7L8L6 764 aaKnown RBP13.58□□□□□ -0.24
YBX3-213ENST00000542641 CATIPQ7Z7H3 387 aa13.58□□□□□ -0.24
YBX3-213ENST00000542641 SPICE1Q8N0Z3 855 aa13.58□□□□□ -0.24
YBX3-213ENST00000542641 FBXL16Q8N461 479 aa13.58□□□□□ -0.24
YBX3-213ENST00000542641 PNMA1Q8ND90 353 aa13.58□□□□□ -0.24
YBX3-213ENST00000542641 BRF1Q92994 677 aa13.58□□□□□ -0.24
YBX3-213ENST00000542641 MS4A4AQ96JQ5 239 aa13.58□□□□□ -0.24
YBX3-213ENST00000542641 MTMR7Q9Y216 660 aa13.58□□□□□ -0.24
YBX3-213ENST00000542641 CCL15-CCL14A0A0B4J2E2 113 aa13.57□□□□□ -0.24
YBX3-213ENST00000542641 MANSC4A6NHS7 340 aaPredicted RBP13.57□□□□□ -0.24
YBX3-213ENST00000542641 NDUFB10O96000 172 aa13.57□□□□□ -0.24
YBX3-213ENST00000542641 TOB2Q14106 344 aaPredicted RBP13.57□□□□□ -0.24
YBX3-213ENST00000542641 CCL15Q16663 113 aa13.57□□□□□ -0.24
YBX3-213ENST00000542641 SLFN13Q68D06 897 aa13.57□□□□□ -0.24
YBX3-213ENST00000542641 SYNE3Q6ZMZ3 975 aa13.57□□□□□ -0.24
YBX3-213ENST00000542641 SGMS1Q86VZ5 419 aa13.57□□□□□ -0.24
YBX3-213ENST00000542641 IFNLR1Q8IU57 520 aaPredicted RBP13.57□□□□□ -0.24
YBX3-213ENST00000542641 GMCL1P1Q8NEA9 526 aa13.57□□□□□ -0.24
YBX3-213ENST00000542641 LPAR1Q92633 364 aa13.57□□□□□ -0.24
YBX3-213ENST00000542641 CHMP4CQ96CF2 233 aa13.57□□□□□ -0.24
YBX3-213ENST00000542641 C12orf42Q96LP6 360 aa13.57□□□□□ -0.24
YBX3-213ENST00000542641 AGXT2Q9BYV1 514 aa13.57□□□□□ -0.24
YBX3-213ENST00000542641 ALDH8A1Q9H2A2 487 aaPredicted RBP13.57□□□□□ -0.24
YBX3-213ENST00000542641 FARP1Q9Y4F1 1045 aaPredicted RBP13.57□□□□□ -0.24
YBX3-213ENST00000542641 SLC12A7Q9Y666 1083 aa13.57□□□□□ -0.24
YBX3-213ENST00000542641 WDR33Q9C0J8 1336 aaKnown RBP13.57□□□□□ -0.24
YBX3-213ENST00000542641 KLF18A0A0U1RQI7 1052 aa13.56□□□□□ -0.24
YBX3-213ENST00000542641 AOC2O75106 756 aa13.56□□□□□ -0.24
YBX3-213ENST00000542641 SLC1A4P43007 532 aa13.56□□□□□ -0.24
YBX3-213ENST00000542641 VEGFBP49765 207 aa13.56□□□□□ -0.24
YBX3-213ENST00000542641 MNX1P50219 401 aaPredicted RBP13.56□□□□□ -0.24
YBX3-213ENST00000542641 AK2P54819 239 aa13.56□□□□□ -0.24
YBX3-213ENST00000542641 INHBEP58166 350 aa13.56□□□□□ -0.24
YBX3-213ENST00000542641 KIF23Q02241 960 aaPredicted RBP13.56□□□□□ -0.24
YBX3-213ENST00000542641 APOBRQ0VD83 1088 aa13.56□□□□□ -0.24
YBX3-213ENST00000542641 ANKRD1Q15327 319 aa13.56□□□□□ -0.24
YBX3-213ENST00000542641 KIAA1755Q5JYT7 1200 aa13.56□□□□□ -0.24
YBX3-213ENST00000542641 ZNF654Q8IZM8 581 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms