RNA–Protein interactions for RNA: ENST00000542495.5

ATPAF1-212, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2 BASIC

Gene ATPAF1, Length 1,779 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-212ENST00000542495 IRF5Q13568 498 aa5.95□□□□□ -1.46
ATPAF1-212ENST00000542495 GNL2Q13823 731 aaKnown RBP5.95□□□□□ -1.46
ATPAF1-212ENST00000542495 MORC3Q14149 939 aa5.95□□□□□ -1.46
ATPAF1-212ENST00000542495 RTN1Q16799 776 aa5.95□□□□□ -1.46
ATPAF1-212ENST00000542495 KMT5BQ4FZB7 885 aa5.95□□□□□ -1.46
ATPAF1-212ENST00000542495 RILPL1Q5EBL4 403 aa5.95□□□□□ -1.46
ATPAF1-212ENST00000542495 SUSD4Q5VX71 490 aa5.95□□□□□ -1.46
ATPAF1-212ENST00000542495 TRIM65Q6PJ69 517 aa5.95□□□□□ -1.46
ATPAF1-212ENST00000542495 MFSD6Q6ZSS7 791 aa5.95□□□□□ -1.46
ATPAF1-212ENST00000542495 DIS3L2Q8IYB7 885 aaKnown RBP5.95□□□□□ -1.46
ATPAF1-212ENST00000542495 TMTC2Q8N394 836 aa5.95□□□□□ -1.46
ATPAF1-212ENST00000542495 LCORLQ8N3X6 602 aa5.95□□□□□ -1.46
ATPAF1-212ENST00000542495 CRACR2BQ8N4Y2 399 aaPredicted RBP5.95□□□□□ -1.46
ATPAF1-212ENST00000542495 TRIML1Q8N9V2 468 aa5.95□□□□□ -1.46
ATPAF1-212ENST00000542495 TTC13Q8NBP0 860 aa5.95□□□□□ -1.46
ATPAF1-212ENST00000542495 CNNM3Q8NE01 707 aa5.95□□□□□ -1.46
ATPAF1-212ENST00000542495 HELBQ8NG08 1087 aaPredicted RBP5.95□□□□□ -1.46
ATPAF1-212ENST00000542495 MYL10Q9BUA6 226 aa5.95□□□□□ -1.46
ATPAF1-212ENST00000542495 PRDM10Q9NQV6 1147 aa5.95□□□□□ -1.46
ATPAF1-212ENST00000542495 FANCLQ9NW38 375 aa5.95□□□□□ -1.46
ATPAF1-212ENST00000542495 ANAPC4Q9UJX5 808 aa5.95□□□□□ -1.46
ATPAF1-212ENST00000542495 MAN1B1Q9UKM7 699 aa5.95□□□□□ -1.46
ATPAF1-212ENST00000542495 SRCAPQ6ZRS2 3230 aa5.95□□□□□ -1.46
ATPAF1-212ENST00000542495 ZNF804BA4D1E1 1349 aa5.95□□□□□ -1.46
ATPAF1-212ENST00000542495 CCDC196A0A1B0GTZ2 297 aa5.95□□□□□ -1.46
ATPAF1-212ENST00000542495 FOXN1O15353 648 aa5.95□□□□□ -1.46
ATPAF1-212ENST00000542495 ACTN4O43707 911 aaKnown RBP5.95□□□□□ -1.46
ATPAF1-212ENST00000542495 PRKAB2O43741 272 aa5.95□□□□□ -1.46
ATPAF1-212ENST00000542495 NRDCO43847 1150 aa5.95□□□□□ -1.46
ATPAF1-212ENST00000542495 DEXIO95424 95 aa5.95□□□□□ -1.46
ATPAF1-212ENST00000542495 H2AFXP16104 143 aaPredicted RBP5.95□□□□□ -1.46
ATPAF1-212ENST00000542495 GRIN1Q05586 938 aa5.95□□□□□ -1.46
ATPAF1-212ENST00000542495 WTAPQ15007 396 aa5.95□□□□□ -1.46
ATPAF1-212ENST00000542495 POSTNQ15063 836 aa5.95□□□□□ -1.46
ATPAF1-212ENST00000542495 PPP2R5BQ15173 497 aa5.95□□□□□ -1.46
ATPAF1-212ENST00000542495 SAFBQ15424 915 aaKnown RBP eCLIP5.95□□□□□ -1.46
ATPAF1-212ENST00000542495 SEC23AQ15436 765 aa5.95□□□□□ -1.46
ATPAF1-212ENST00000542495 TMEM259Q4ZIN3 620 aa5.95□□□□□ -1.46
ATPAF1-212ENST00000542495 CT47A1Q5JQC4 288 aaPredicted RBP5.95□□□□□ -1.46
ATPAF1-212ENST00000542495 ISM2Q6H9L7 571 aa5.95□□□□□ -1.46
ATPAF1-212ENST00000542495 INTS5Q6P9B9 1019 aaKnown RBP5.95□□□□□ -1.46
ATPAF1-212ENST00000542495 OLFM4Q6UX06 510 aa5.95□□□□□ -1.46
ATPAF1-212ENST00000542495 SYT10Q6XYQ8 523 aa5.95□□□□□ -1.46
ATPAF1-212ENST00000542495 KRT27Q7Z3Y8 459 aa5.95□□□□□ -1.46
ATPAF1-212ENST00000542495 REXO1L1PQ8IX06 675 aa5.95□□□□□ -1.46
ATPAF1-212ENST00000542495 TRIM22Q8IYM9 498 aa5.95□□□□□ -1.46
ATPAF1-212ENST00000542495 MLKLQ8NB16 471 aa5.95□□□□□ -1.46
ATPAF1-212ENST00000542495 ENOX1Q8TC92 643 aaKnown RBP5.95□□□□□ -1.46
ATPAF1-212ENST00000542495 MED15Q96RN5 788 aa5.95□□□□□ -1.46
ATPAF1-212ENST00000542495 NACAP1Q9BZK3 213 aa5.95□□□□□ -1.46
ATPAF1-212ENST00000542495 RNF41Q9H4P4 317 aaPredicted RBP5.95□□□□□ -1.46
ATPAF1-212ENST00000542495 BTG4Q9NY30 223 aa5.95□□□□□ -1.46
ATPAF1-212ENST00000542495 HOOK1Q9UJC3 728 aaKnown RBP5.95□□□□□ -1.46
ATPAF1-212ENST00000542495 SRPRBQ9Y5M8 271 aaKnown RBP5.95□□□□□ -1.46
ATPAF1-212ENST00000542495 BRWD3Q6RI45 1802 aa5.95□□□□□ -1.46
ATPAF1-212ENST00000542495 A0A1B0GUL6 1792 aa5.94□□□□□ -1.46
ATPAF1-212ENST00000542495 DOT1LQ8TEK3 1739 aa5.94□□□□□ -1.46
ATPAF1-212ENST00000542495 TMEM232C9JQI7 657 aa5.94□□□□□ -1.46
ATPAF1-212ENST00000542495 SNAP23O00161 211 aa5.94□□□□□ -1.46
ATPAF1-212ENST00000542495 FANCGO15287 622 aa5.94□□□□□ -1.46
ATPAF1-212ENST00000542495 ARHGAP6O43182 974 aa5.94□□□□□ -1.46
ATPAF1-212ENST00000542495 CAMTA2O94983 1202 aa5.94□□□□□ -1.46
ATPAF1-212ENST00000542495 SERPINC1P01008 464 aa5.94□□□□□ -1.46
ATPAF1-212ENST00000542495 FGRP09769 529 aa5.94□□□□□ -1.46
ATPAF1-212ENST00000542495 GABPB1Q06547 395 aaPredicted RBP5.94□□□□□ -1.46
ATPAF1-212ENST00000542495 FUT2Q10981 343 aa5.94□□□□□ -1.46
ATPAF1-212ENST00000542495 SART3Q15020 963 aaKnown RBP5.94□□□□□ -1.46
ATPAF1-212ENST00000542495 DIXDC1Q155Q3 683 aa5.94□□□□□ -1.46
ATPAF1-212ENST00000542495 ELF2Q15723 593 aa5.94□□□□□ -1.46
ATPAF1-212ENST00000542495 PARP10Q53GL7 1025 aa5.94□□□□□ -1.46
ATPAF1-212ENST00000542495 KANK3Q6NY19 840 aa5.94□□□□□ -1.46
ATPAF1-212ENST00000542495 FBXO38Q6PIJ6 1188 aa5.94□□□□□ -1.46
ATPAF1-212ENST00000542495 ZNF654Q8IZM8 581 aa5.94□□□□□ -1.46
ATPAF1-212ENST00000542495 FANCBQ8NB91 859 aa5.94□□□□□ -1.46
ATPAF1-212ENST00000542495 SHISA4Q96DD7 197 aa5.94□□□□□ -1.46
ATPAF1-212ENST00000542495 UTP14AQ9BVJ6 771 aaKnown RBP5.94□□□□□ -1.46
ATPAF1-212ENST00000542495 RNF26Q9BY78 433 aaPredicted RBP5.94□□□□□ -1.46
ATPAF1-212ENST00000542495 SEC31BQ9NQW1 1179 aa5.94□□□□□ -1.46
ATPAF1-212ENST00000542495 SERTAD1Q9UHV2 236 aa5.94□□□□□ -1.46
ATPAF1-212ENST00000542495 KCNJ14Q9UNX9 436 aa5.94□□□□□ -1.46
ATPAF1-212ENST00000542495 PCDHB6Q9Y5E3 794 aa5.94□□□□□ -1.46
ATPAF1-212ENST00000542495 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP5.94□□□□□ -1.46
ATPAF1-212ENST00000542495 SLC4A4Q9Y6R1 1079 aa5.94□□□□□ -1.46
ATPAF1-212ENST00000542495 DLEC1Q9Y238 1755 aa5.94□□□□□ -1.46
ATPAF1-212ENST00000542495 CACNA1SQ13698 1873 aa5.93□□□□□ -1.46
ATPAF1-212ENST00000542495 KIF20AO95235 890 aa5.93□□□□□ -1.46
ATPAF1-212ENST00000542495 NTSR2O95665 410 aa5.93□□□□□ -1.46
ATPAF1-212ENST00000542495 TOP1P11387 765 aaKnown RBP5.93□□□□□ -1.46
ATPAF1-212ENST00000542495 ERCC5P28715 1186 aaPredicted RBP5.93□□□□□ -1.46
ATPAF1-212ENST00000542495 TDO2P48775 406 aa5.93□□□□□ -1.46
ATPAF1-212ENST00000542495 BCAMP50895 628 aa5.93□□□□□ -1.46
ATPAF1-212ENST00000542495 FMR1Q06787 632 aaKnown RBP eCLIP5.93□□□□□ -1.46
ATPAF1-212ENST00000542495 PPARAQ07869 468 aa5.93□□□□□ -1.46
ATPAF1-212ENST00000542495 PKN1Q16512 942 aa5.93□□□□□ -1.46
ATPAF1-212ENST00000542495 CFAP100Q494V2 611 aa5.93□□□□□ -1.46
ATPAF1-212ENST00000542495 CCDC152Q4G0S7 254 aa5.93□□□□□ -1.46
ATPAF1-212ENST00000542495 APTXQ7Z2E3 356 aaKnown RBP5.93□□□□□ -1.46
ATPAF1-212ENST00000542495 SH3RF1Q7Z6J0 888 aa5.93□□□□□ -1.46
ATPAF1-212ENST00000542495 DEFB132Q7Z7B7 95 aa5.93□□□□□ -1.46
ATPAF1-212ENST00000542495 TC2NQ8N9U0 490 aa5.93□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 83.1 ms