RNA–Protein interactions for RNA: ENST00000542354.1

TRAV1-1-201, Transcript of T cell receptor alpha variable 1-1, humanhuman

APPRIS P1 BASIC

Gene TRAV1-1, Length 392 nt, Biotype TR V gene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV1-1-201ENST00000542354 EML3Q32P44 896 aa3.2□□□□□ -1.9
TRAV1-1-201ENST00000542354 TBC1D10BQ4KMP7 808 aaPredicted RBP3.2□□□□□ -1.9
TRAV1-1-201ENST00000542354 PRR5LQ6MZQ0 368 aa3.2□□□□□ -1.9
TRAV1-1-201ENST00000542354 ARMC9Q7Z3E5 817 aa3.2□□□□□ -1.9
TRAV1-1-201ENST00000542354 SYT9Q86SS6 491 aa3.2□□□□□ -1.9
TRAV1-1-201ENST00000542354 FCHSD1Q86WN1 690 aa3.2□□□□□ -1.9
TRAV1-1-201ENST00000542354 ADSSL1Q8N142 457 aa3.2□□□□□ -1.9
TRAV1-1-201ENST00000542354 DIS3LQ8TF46 1054 aaKnown RBP3.2□□□□□ -1.9
TRAV1-1-201ENST00000542354 ANKS1AQ92625 1134 aa3.2□□□□□ -1.9
TRAV1-1-201ENST00000542354 DPF2Q92785 391 aa3.2□□□□□ -1.9
TRAV1-1-201ENST00000542354 TNFRSF25Q93038 417 aa3.2□□□□□ -1.9
TRAV1-1-201ENST00000542354 CCDC85AQ96PX6 553 aaPredicted RBP3.2□□□□□ -1.9
TRAV1-1-201ENST00000542354 SLC4A9Q96Q91 983 aa3.2□□□□□ -1.9
TRAV1-1-201ENST00000542354 PRDM12Q9H4Q4 367 aa3.2□□□□□ -1.9
TRAV1-1-201ENST00000542354 C11orf49Q9H6J7 331 aa3.2□□□□□ -1.9
TRAV1-1-201ENST00000542354 DNAAF2Q9NVR5 837 aaKnown RBP3.2□□□□□ -1.9
TRAV1-1-201ENST00000542354 PRKAG2Q9UGJ0 569 aa3.2□□□□□ -1.9
TRAV1-1-201ENST00000542354 SRRDQ9UH36 339 aa3.2□□□□□ -1.9
TRAV1-1-201ENST00000542354 RBM19Q9Y4C8 960 aaKnown RBP3.2□□□□□ -1.9
TRAV1-1-201ENST00000542354 AFDNP55196 1824 aaKnown RBP3.2□□□□□ -1.9
TRAV1-1-201ENST00000542354 ITPR3Q14573 2671 aa3.2□□□□□ -1.9
TRAV1-1-201ENST00000542354 COL4A5P29400 1685 aa3.2□□□□□ -1.9
TRAV1-1-201ENST00000542354 EP300Q09472 2414 aaPredicted RBP3.2□□□□□ -1.9
TRAV1-1-201ENST00000542354 CACNA1SQ13698 1873 aa3.2□□□□□ -1.9
TRAV1-1-201ENST00000542354 TJP1Q07157 1748 aa3.19□□□□□ -1.9
TRAV1-1-201ENST00000542354 NRXN2Q9P2S2 1712 aa3.19□□□□□ -1.9
TRAV1-1-201ENST00000542354 HSFX4A0A1B0GTS1 333 aaPredicted RBP3.19□□□□□ -1.9
TRAV1-1-201ENST00000542354 HSFX3A0A1B0GWH4 333 aaPredicted RBP3.19□□□□□ -1.9
TRAV1-1-201ENST00000542354 M0R082 166 aa3.19□□□□□ -1.9
TRAV1-1-201ENST00000542354 CYP27B1O15528 508 aa3.19□□□□□ -1.9
TRAV1-1-201ENST00000542354 PPIP5K2O43314 1243 aa3.19□□□□□ -1.9
TRAV1-1-201ENST00000542354 THBS1P07996 1170 aa3.19□□□□□ -1.9
TRAV1-1-201ENST00000542354 ZBTB48P10074 688 aaPredicted RBP3.19□□□□□ -1.9
TRAV1-1-201ENST00000542354 LACTBP83111 547 aaPredicted RBP3.19□□□□□ -1.9
TRAV1-1-201ENST00000542354 PTPN12Q05209 780 aaKnown RBP3.19□□□□□ -1.9
TRAV1-1-201ENST00000542354 NKAPLQ5M9Q1 402 aa3.19□□□□□ -1.9
TRAV1-1-201ENST00000542354 C9orf50Q5SZB4 431 aa3.19□□□□□ -1.9
TRAV1-1-201ENST00000542354 TXNRD3Q86VQ6 643 aa3.19□□□□□ -1.9
TRAV1-1-201ENST00000542354 TRIM50Q86XT4 487 aa3.19□□□□□ -1.9
TRAV1-1-201ENST00000542354 CNBD1Q8NA66 436 aa3.19□□□□□ -1.9
TRAV1-1-201ENST00000542354 ZNF417Q8TAU3 575 aa3.19□□□□□ -1.9
TRAV1-1-201ENST00000542354 SPATA18Q8TC71 538 aa3.19□□□□□ -1.9
TRAV1-1-201ENST00000542354 IP6K1Q92551 441 aa3.19□□□□□ -1.9
TRAV1-1-201ENST00000542354 TIFAQ96CG3 184 aa3.19□□□□□ -1.9
TRAV1-1-201ENST00000542354 TRIM11Q96F44 468 aa3.19□□□□□ -1.9
TRAV1-1-201ENST00000542354 ZNF587Q96SQ5 575 aaPredicted RBP3.19□□□□□ -1.9
TRAV1-1-201ENST00000542354 TPSG1Q9NRR2 321 aa3.19□□□□□ -1.9
TRAV1-1-201ENST00000542354 ANKFY1Q9P2R3 1169 aa3.19□□□□□ -1.9
TRAV1-1-201ENST00000542354 NOD1Q9Y239 953 aa3.19□□□□□ -1.9
TRAV1-1-201ENST00000542354 ADGRB1O14514 1584 aa3.19□□□□□ -1.9
TRAV1-1-201ENST00000542354 ALPK3Q96L96 1907 aa3.19□□□□□ -1.9
TRAV1-1-201ENST00000542354 AOX1Q06278 1338 aa3.19□□□□□ -1.9
TRAV1-1-201ENST00000542354 PRAMEF22A3QJZ6 481 aa3.18□□□□□ -1.9
TRAV1-1-201ENST00000542354 EFSO43281 561 aa3.18□□□□□ -1.9
TRAV1-1-201ENST00000542354 RAD17O75943 681 aa3.18□□□□□ -1.9
TRAV1-1-201ENST00000542354 ADH7P40394 386 aa3.18□□□□□ -1.9
TRAV1-1-201ENST00000542354 COL9A3Q14050 684 aaPredicted RBP3.18□□□□□ -1.9
TRAV1-1-201ENST00000542354 ADGRE1Q14246 886 aa3.18□□□□□ -1.9
TRAV1-1-201ENST00000542354 TAF1CQ15572 869 aaPredicted RBP3.18□□□□□ -1.9
TRAV1-1-201ENST00000542354 NEUROD2Q15784 382 aa3.18□□□□□ -1.9
TRAV1-1-201ENST00000542354 PRSS36Q5K4E3 855 aa3.18□□□□□ -1.9
TRAV1-1-201ENST00000542354 KIAA0319Q5VV43 1072 aa3.18□□□□□ -1.9
TRAV1-1-201ENST00000542354 INTS5Q6P9B9 1019 aaKnown RBP3.18□□□□□ -1.9
TRAV1-1-201ENST00000542354 LRSAM1Q6UWE0 723 aa3.18□□□□□ -1.9
TRAV1-1-201ENST00000542354 BMP8AQ7Z5Y6 402 aa3.18□□□□□ -1.9
TRAV1-1-201ENST00000542354 SUGP1Q8IWZ8 645 aaKnown RBP3.18□□□□□ -1.9
TRAV1-1-201ENST00000542354 SP8Q8IXZ3 490 aa3.18□□□□□ -1.9
TRAV1-1-201ENST00000542354 MICALL1Q8N3F8 863 aa3.18□□□□□ -1.9
TRAV1-1-201ENST00000542354 DTWD1Q8N5C7 304 aa3.18□□□□□ -1.9
TRAV1-1-201ENST00000542354 RHPN1Q8TCX5 695 aa3.18□□□□□ -1.9
TRAV1-1-201ENST00000542354 NKD2Q969F2 451 aaPredicted RBP3.18□□□□□ -1.9
TRAV1-1-201ENST00000542354 ARHGAP39Q9C0H5 1083 aa3.18□□□□□ -1.9
TRAV1-1-201ENST00000542354 TMX4Q9H1E5 349 aaPredicted RBP3.18□□□□□ -1.9
TRAV1-1-201ENST00000542354 DLL3Q9NYJ7 618 aa3.18□□□□□ -1.9
TRAV1-1-201ENST00000542354 GGA3Q9NZ52 723 aa3.18□□□□□ -1.9
TRAV1-1-201ENST00000542354 ZNF232Q9UNY5 417 aa3.18□□□□□ -1.9
TRAV1-1-201ENST00000542354 CEP250Q9BV73 2442 aa3.18□□□□□ -1.9
TRAV1-1-201ENST00000542354 TTC21BQ7Z4L5 1316 aa3.18□□□□□ -1.9
TRAV1-1-201ENST00000542354 FAM208AQ9UK61 1670 aaKnown RBP3.17□□□□□ -1.9
TRAV1-1-201ENST00000542354 SSC5DA1L4H1 1573 aa3.17□□□□□ -1.9
TRAV1-1-201ENST00000542354 DNAH14Q0VDD8 3507 aa3.17□□□□□ -1.9
TRAV1-1-201ENST00000542354 ITGB4P16144 1822 aa3.17□□□□□ -1.9
TRAV1-1-201ENST00000542354 KDRP35968 1356 aa3.17□□□□□ -1.9
TRAV1-1-201ENST00000542354 SPTA1P02549 2419 aa3.17□□□□□ -1.9
TRAV1-1-201ENST00000542354 ASPMQ8IZT6 3477 aa3.17□□□□□ -1.9
TRAV1-1-201ENST00000542354 GSC2O15499 205 aa3.17□□□□□ -1.9
TRAV1-1-201ENST00000542354 PTCD1O75127 700 aaKnown RBP3.17□□□□□ -1.9
TRAV1-1-201ENST00000542354 U2AF1L5P0DN76 240 aaPredicted RBP3.17□□□□□ -1.9
TRAV1-1-201ENST00000542354 EPB42P16452 691 aa3.17□□□□□ -1.9
TRAV1-1-201ENST00000542354 PSMC4P43686 418 aa3.17□□□□□ -1.9
TRAV1-1-201ENST00000542354 ATP1A2P50993 1020 aa3.17□□□□□ -1.9
TRAV1-1-201ENST00000542354 U2AF1Q01081 240 aaKnown RBP eCLIP3.17□□□□□ -1.9
TRAV1-1-201ENST00000542354 SPEM2Q0P670 501 aa3.17□□□□□ -1.9
TRAV1-1-201ENST00000542354 LRRC41Q15345 812 aa3.17□□□□□ -1.9
TRAV1-1-201ENST00000542354 AOC3Q16853 763 aa3.17□□□□□ -1.9
TRAV1-1-201ENST00000542354 NBPF9Q3BBW0 867 aa3.17□□□□□ -1.9
TRAV1-1-201ENST00000542354 LDLRAD1Q5T700 205 aa3.17□□□□□ -1.9
TRAV1-1-201ENST00000542354 C1orf53Q5VUE5 145 aa3.17□□□□□ -1.9
TRAV1-1-201ENST00000542354 TMC4Q7Z404 712 aa3.17□□□□□ -1.9
TRAV1-1-201ENST00000542354 FAM178BQ8IXR5 827 aa3.17□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms