RNA–Protein interactions for RNA: ENST00000540527.5

LRP6-205, Transcript of LDL receptor related protein 6, humanhuman

TSL 5

Gene LRP6, Length 593 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP6-205ENST00000540527 ZBED6P86452 979 aa11.72□□□□□ -0.53
LRP6-205ENST00000540527 CHST15Q7LFX5 561 aaPredicted RBP11.72□□□□□ -0.53
LRP6-205ENST00000540527 SKAP1Q86WV1 359 aa11.72□□□□□ -0.53
LRP6-205ENST00000540527 ZSCAN1Q8NBB4 408 aa11.72□□□□□ -0.53
LRP6-205ENST00000540527 PPIL4Q8WUA2 492 aaKnown RBP eCLIP11.72□□□□□ -0.53
LRP6-205ENST00000540527 CCT6BQ92526 530 aa11.72□□□□□ -0.53
LRP6-205ENST00000540527 ISCA1Q9BUE6 129 aa11.72□□□□□ -0.53
LRP6-205ENST00000540527 LIN7BQ9HAP6 207 aa11.72□□□□□ -0.53
LRP6-205ENST00000540527 CRTAC1Q9NQ79 661 aa11.72□□□□□ -0.53
LRP6-205ENST00000540527 FAM170AA1A519 330 aa11.71□□□□□ -0.53
LRP6-205ENST00000540527 GOLIM4O00461 696 aa11.71□□□□□ -0.53
LRP6-205ENST00000540527 KPNA6O60684 536 aa11.71□□□□□ -0.53
LRP6-205ENST00000540527 MTA2O94776 668 aa11.71□□□□□ -0.53
LRP6-205ENST00000540527 LTFP02788 710 aa11.71□□□□□ -0.53
LRP6-205ENST00000540527 LRRFIP1Q32MZ4 808 aaKnown RBP11.71□□□□□ -0.53
LRP6-205ENST00000540527 INAVAQ3KP66 663 aa11.71□□□□□ -0.53
LRP6-205ENST00000540527 TUBB8Q3ZCM7 444 aa11.71□□□□□ -0.53
LRP6-205ENST00000540527 LRRC69Q6ZNQ3 347 aa11.71□□□□□ -0.53
LRP6-205ENST00000540527 FHDC1Q9C0D6 1143 aaPredicted RBP11.71□□□□□ -0.53
LRP6-205ENST00000540527 PHAXQ9H814 394 aaKnown RBP11.71□□□□□ -0.53
LRP6-205ENST00000540527 NAP1L2Q9ULW6 460 aaPredicted RBP11.71□□□□□ -0.53
LRP6-205ENST00000540527 TNPO3Q9Y5L0 923 aaKnown RBP11.71□□□□□ -0.53
LRP6-205ENST00000540527 LRRFIP2Q9Y608 721 aaKnown RBP11.71□□□□□ -0.53
LRP6-205ENST00000540527 PHF20L1A8MW92 1017 aa11.7□□□□□ -0.54
LRP6-205ENST00000540527 FZD9O00144 591 aa11.7□□□□□ -0.54
LRP6-205ENST00000540527 ASLP04424 464 aa11.7□□□□□ -0.54
LRP6-205ENST00000540527 NCAM1P13591 858 aa11.7□□□□□ -0.54
LRP6-205ENST00000540527 VCAM1P19320 739 aa11.7□□□□□ -0.54
LRP6-205ENST00000540527 GRK6P43250 576 aa11.7□□□□□ -0.54
LRP6-205ENST00000540527 MAPK9P45984 424 aa11.7□□□□□ -0.54
LRP6-205ENST00000540527 ID4P47928 161 aa11.7□□□□□ -0.54
LRP6-205ENST00000540527 SUMO1P63165 101 aaKnown RBP11.7□□□□□ -0.54
LRP6-205ENST00000540527 ATP13A4Q4VNC1 1196 aa11.7□□□□□ -0.54
LRP6-205ENST00000540527 HEATR6Q6AI08 1181 aaKnown RBP11.7□□□□□ -0.54
LRP6-205ENST00000540527 OR2W6PQ8NHA6 318 aa11.7□□□□□ -0.54
LRP6-205ENST00000540527 RHPN1Q8TCX5 695 aa11.7□□□□□ -0.54
LRP6-205ENST00000540527 GCC1Q96CN9 775 aa11.7□□□□□ -0.54
LRP6-205ENST00000540527 TCF12Q99081 682 aa11.7□□□□□ -0.54
LRP6-205ENST00000540527 NIFKQ9BYG3 293 aaKnown RBP11.7□□□□□ -0.54
LRP6-205ENST00000540527 KMT5AQ9NQR1 393 aa11.7□□□□□ -0.54
LRP6-205ENST00000540527 SH3GLB2Q9NR46 395 aa11.7□□□□□ -0.54
LRP6-205ENST00000540527 LRRC4BQ9NT99 713 aa11.7□□□□□ -0.54
LRP6-205ENST00000540527 VPS9D1Q9Y2B5 631 aa11.7□□□□□ -0.54
LRP6-205ENST00000540527 A0A1W2PQU0 124 aa11.69□□□□□ -0.54
LRP6-205ENST00000540527 RHCEP18577 417 aa11.69□□□□□ -0.54
LRP6-205ENST00000540527 TM4SF4P48230 202 aa11.69□□□□□ -0.54
LRP6-205ENST00000540527 RHDQ02161 417 aa11.69□□□□□ -0.54
LRP6-205ENST00000540527 LAMC2Q13753 1193 aa11.69□□□□□ -0.54
LRP6-205ENST00000540527 TRIM14Q14142 442 aa11.69□□□□□ -0.54
LRP6-205ENST00000540527 INTS11Q5TA45 600 aaKnown RBP11.69□□□□□ -0.54
LRP6-205ENST00000540527 LRGUKQ96M69 825 aa11.69□□□□□ -0.54
LRP6-205ENST00000540527 ISY1Q9ULR0 285 aaKnown RBP11.69□□□□□ -0.54
LRP6-205ENST00000540527 TTLL3Q9Y4R7 772 aa11.69□□□□□ -0.54
LRP6-205ENST00000540527 PAGE1O75459 146 aa11.68□□□□□ -0.54
LRP6-205ENST00000540527 CNOT4O95628 575 aaKnown RBP11.68□□□□□ -0.54
LRP6-205ENST00000540527 TXLNAP40222 546 aa11.68□□□□□ -0.54
LRP6-205ENST00000540527 IARSP41252 1262 aaKnown RBP11.68□□□□□ -0.54
LRP6-205ENST00000540527 CLK1P49759 484 aaKnown RBP11.68□□□□□ -0.54
LRP6-205ENST00000540527 USP14P54578 494 aa11.68□□□□□ -0.54
LRP6-205ENST00000540527 PRKG2Q13237 762 aa11.68□□□□□ -0.54
LRP6-205ENST00000540527 YOD1Q5VVQ6 348 aaPredicted RBP11.68□□□□□ -0.54
LRP6-205ENST00000540527 CATIPQ7Z7H3 387 aa11.68□□□□□ -0.54
LRP6-205ENST00000540527 NBPF11Q86T75 865 aa11.68□□□□□ -0.54
LRP6-205ENST00000540527 MSL3Q8N5Y2 521 aaKnown RBP11.68□□□□□ -0.54
LRP6-205ENST00000540527 FRS2Q8WU20 508 aa11.68□□□□□ -0.54
LRP6-205ENST00000540527 RPGRQ92834 1020 aaKnown RBP11.68□□□□□ -0.54
LRP6-205ENST00000540527 SUSD3Q96L08 255 aa11.68□□□□□ -0.54
LRP6-205ENST00000540527 SGCZQ96LD1 299 aa11.68□□□□□ -0.54
LRP6-205ENST00000540527 AARSD1Q9BTE6 412 aaKnown RBP11.68□□□□□ -0.54
LRP6-205ENST00000540527 AAASQ9NRG9 546 aa11.68□□□□□ -0.54
LRP6-205ENST00000540527 hCG_1642624A0A1W2PR95 340 aa11.67□□□□□ -0.54
LRP6-205ENST00000540527 OPA1O60313 960 aa11.67□□□□□ -0.54
LRP6-205ENST00000540527 TSPAN7P41732 249 aa11.67□□□□□ -0.54
LRP6-205ENST00000540527 KRT85P78386 507 aa11.67□□□□□ -0.54
LRP6-205ENST00000540527 HSP90AA2PQ14568 343 aaPredicted RBP11.67□□□□□ -0.54
LRP6-205ENST00000540527 ZNF460Q14592 562 aa11.67□□□□□ -0.54
LRP6-205ENST00000540527 BRAPQ7Z569 592 aa11.67□□□□□ -0.54
LRP6-205ENST00000540527 SLC41A1Q8IVJ1 513 aa11.67□□□□□ -0.54
LRP6-205ENST00000540527 CMTR2Q8IYT2 770 aaKnown RBP11.67□□□□□ -0.54
LRP6-205ENST00000540527 C7orf43Q8WVR3 580 aa11.67□□□□□ -0.54
LRP6-205ENST00000540527 HSPBAP1Q96EW2 488 aa11.67□□□□□ -0.54
LRP6-205ENST00000540527 TMEM87BQ96K49 555 aa11.67□□□□□ -0.54
LRP6-205ENST00000540527 SLC12A5Q9H2X9 1139 aa11.67□□□□□ -0.54
LRP6-205ENST00000540527 EFCC1Q9HA90 598 aa11.67□□□□□ -0.54
LRP6-205ENST00000540527 NMRK2Q9NPI5 230 aa11.67□□□□□ -0.54
LRP6-205ENST00000540527 METRNQ9UJH8 293 aa11.67□□□□□ -0.54
LRP6-205ENST00000540527 AFG3L2Q9Y4W6 797 aa11.67□□□□□ -0.54
LRP6-205ENST00000540527 CLSPNQ9HAW4 1339 aa11.66□□□□□ -0.54
LRP6-205ENST00000540527 ADH1BP00325 375 aa11.66□□□□□ -0.54
LRP6-205ENST00000540527 HSPA6P17066 643 aa11.66□□□□□ -0.54
LRP6-205ENST00000540527 CAPN3P20807 821 aa11.66□□□□□ -0.54
LRP6-205ENST00000540527 SCP2P22307 547 aa11.66□□□□□ -0.54
LRP6-205ENST00000540527 ATICP31939 592 aa11.66□□□□□ -0.54
LRP6-205ENST00000540527 FLT3P36888 993 aa11.66□□□□□ -0.54
LRP6-205ENST00000540527 ERVK-21P61565 698 aa11.66□□□□□ -0.54
LRP6-205ENST00000540527 PRR16Q569H4 304 aa11.66□□□□□ -0.54
LRP6-205ENST00000540527 IQSEC1Q6DN90 963 aa11.66□□□□□ -0.54
LRP6-205ENST00000540527 KIAA1211LQ6NV74 962 aa11.66□□□□□ -0.54
LRP6-205ENST00000540527 FAM180BQ6P0A1 224 aa11.66□□□□□ -0.54
LRP6-205ENST00000540527 CCNJLQ8IV13 435 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms