RNA–Protein interactions for RNA: ENST00000536079.5

DDX55-204, Transcript of DEAD-box helicase 55, humanhuman

TSL 2

Gene DDX55, Length 765 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-204ENST00000536079 STOX1Q6ZVD7 989 aa21.17■□□□□ 0.98
DDX55-204ENST00000536079 LRRC47Q8N1G4 583 aaKnown RBP21.17■□□□□ 0.98
DDX55-204ENST00000536079 CD99L2Q8TCZ2 262 aa21.17■□□□□ 0.98
DDX55-204ENST00000536079 ARHGAP39Q9C0H5 1083 aa21.17■□□□□ 0.98
DDX55-204ENST00000536079 LAMA4Q16363 1823 aa21.17■□□□□ 0.98
DDX55-204ENST00000536079 B4E1Z4 1266 aa21.16■□□□□ 0.98
DDX55-204ENST00000536079 OSBPP22059 807 aa21.16■□□□□ 0.98
DDX55-204ENST00000536079 NOVP48745 357 aa21.16■□□□□ 0.98
DDX55-204ENST00000536079 SP3Q02447 781 aa21.16■□□□□ 0.98
DDX55-204ENST00000536079 COL9A3Q14050 684 aaPredicted RBP21.16■□□□□ 0.98
DDX55-204ENST00000536079 MKL1Q969V6 931 aa21.16■□□□□ 0.98
DDX55-204ENST00000536079 NUP88Q99567 741 aaPredicted RBP21.16■□□□□ 0.98
DDX55-204ENST00000536079 ANO2Q9NQ90 1003 aa21.16■□□□□ 0.98
DDX55-204ENST00000536079 USP17L15C9J2P7 530 aa21.15■□□□□ 0.98
DDX55-204ENST00000536079 USP17L13C9JLJ4 530 aa21.15■□□□□ 0.98
DDX55-204ENST00000536079 USP17L11C9JVI0 530 aa21.15■□□□□ 0.98
DDX55-204ENST00000536079 USP17L18D6R9N7 530 aa21.15■□□□□ 0.98
DDX55-204ENST00000536079 USP17L22D6RA61 530 aa21.15■□□□□ 0.98
DDX55-204ENST00000536079 USP17L17D6RBQ6 530 aa21.15■□□□□ 0.98
DDX55-204ENST00000536079 USP17L19D6RCP7 530 aa21.15■□□□□ 0.98
DDX55-204ENST00000536079 USP17L20D6RJB6 530 aa21.15■□□□□ 0.98
DDX55-204ENST00000536079 TTLL1O95922 423 aa21.15■□□□□ 0.98
DDX55-204ENST00000536079 USP17L24Q0WX57 530 aa21.15■□□□□ 0.98
DDX55-204ENST00000536079 KIAA1211Q6ZU35 1233 aa21.15■□□□□ 0.98
DDX55-204ENST00000536079 RASGRP2Q7LDG7 609 aa21.15■□□□□ 0.98
DDX55-204ENST00000536079 CHMP4CQ96CF2 233 aa21.15■□□□□ 0.98
DDX55-204ENST00000536079 ZKSCAN3Q9BRR0 538 aa21.15■□□□□ 0.98
DDX55-204ENST00000536079 RNF41Q9H4P4 317 aaPredicted RBP21.15■□□□□ 0.98
DDX55-204ENST00000536079 TXNRD2Q9NNW7 524 aa21.15■□□□□ 0.98
DDX55-204ENST00000536079 F5H6K3 240 aa21.14■□□□□ 0.97
DDX55-204ENST00000536079 KDM4AO75164 1064 aa21.14■□□□□ 0.97
DDX55-204ENST00000536079 NDUFB10O96000 172 aa21.14■□□□□ 0.97
DDX55-204ENST00000536079 PCP11498 1178 aaKnown RBP21.14■□□□□ 0.97
DDX55-204ENST00000536079 HERVK_113P62684 666 aa21.14■□□□□ 0.97
DDX55-204ENST00000536079 IRX3P78415 501 aaPredicted RBP21.14■□□□□ 0.97
DDX55-204ENST00000536079 KLRC3Q07444 240 aa21.14■□□□□ 0.97
DDX55-204ENST00000536079 PABPC4Q13310 644 aaKnown RBP eCLIP21.14■□□□□ 0.97
DDX55-204ENST00000536079 NECTIN1Q15223 517 aa21.14■□□□□ 0.97
DDX55-204ENST00000536079 RCSD1Q6JBY9 416 aa21.14■□□□□ 0.97
DDX55-204ENST00000536079 CYB5R4Q7L1T6 521 aa21.14■□□□□ 0.97
DDX55-204ENST00000536079 ANKRD13CQ8N6S4 541 aa21.14■□□□□ 0.97
DDX55-204ENST00000536079 RAD21O60216 631 aa21.13■□□□□ 0.97
DDX55-204ENST00000536079 CNMDO75829 334 aa21.13■□□□□ 0.97
DDX55-204ENST00000536079 SMCR8Q8TEV9 937 aaPredicted RBP21.13■□□□□ 0.97
DDX55-204ENST00000536079 SH2D4AQ9H788 454 aa21.13■□□□□ 0.97
DDX55-204ENST00000536079 TCP11L1Q9NUJ3 509 aa21.13■□□□□ 0.97
DDX55-204ENST00000536079 ZSWIM5Q9P217 1185 aa21.13■□□□□ 0.97
DDX55-204ENST00000536079 RBPJLQ9UBG7 517 aa21.13■□□□□ 0.97
DDX55-204ENST00000536079 PNMA3Q9UL41 463 aa21.13■□□□□ 0.97
DDX55-204ENST00000536079 ZSWIM8A7E2V4 1837 aa21.13■□□□□ 0.97
DDX55-204ENST00000536079 E7EWF7 191 aa21.12■□□□□ 0.97
DDX55-204ENST00000536079 SLC27A2O14975 620 aa21.12■□□□□ 0.97
DDX55-204ENST00000536079 Q3C1V9 767 aa21.12■□□□□ 0.97
DDX55-204ENST00000536079 FAM83BQ5T0W9 1011 aa21.12■□□□□ 0.97
DDX55-204ENST00000536079 LPAR1Q92633 364 aa21.12■□□□□ 0.97
DDX55-204ENST00000536079 ESR2Q92731 530 aa21.12■□□□□ 0.97
DDX55-204ENST00000536079 TANGO6Q9C0B7 1094 aa21.12■□□□□ 0.97
DDX55-204ENST00000536079 GOPCQ9HD26 462 aa21.12■□□□□ 0.97
DDX55-204ENST00000536079 FBXO28Q9NVF7 368 aa21.12■□□□□ 0.97
DDX55-204ENST00000536079 STX8Q9UNK0 236 aa21.12■□□□□ 0.97
DDX55-204ENST00000536079 SPDYE16A6NNV3 312 aaPredicted RBP21.11■□□□□ 0.97
DDX55-204ENST00000536079 WDR46O15213 610 aaKnown RBP21.11■□□□□ 0.97
DDX55-204ENST00000536079 LACTBP83111 547 aaPredicted RBP21.11■□□□□ 0.97
DDX55-204ENST00000536079 CREB3L3Q68CJ9 461 aa21.11■□□□□ 0.97
DDX55-204ENST00000536079 CASC1Q6TDU7 716 aa21.11■□□□□ 0.97
DDX55-204ENST00000536079 TMEM47Q9BQJ4 181 aa21.11■□□□□ 0.97
DDX55-204ENST00000536079 SLFN13Q68D06 897 aa21.1■□□□□ 0.97
DDX55-204ENST00000536079 GMCL1P1Q8NEA9 526 aa21.1■□□□□ 0.97
DDX55-204ENST00000536079 BTBD7Q9P203 1132 aa21.1■□□□□ 0.97
DDX55-204ENST00000536079 GCLCP48506 637 aaPredicted RBP21.09■□□□□ 0.97
DDX55-204ENST00000536079 OTOP1Q7RTM1 612 aa21.09■□□□□ 0.97
DDX55-204ENST00000536079 CTU1Q7Z7A3 348 aaKnown RBP21.09■□□□□ 0.97
DDX55-204ENST00000536079 RASEFQ8IZ41 740 aa21.09■□□□□ 0.97
DDX55-204ENST00000536079 ERO1AQ96HE7 468 aa21.09■□□□□ 0.97
DDX55-204ENST00000536079 TRIM47Q96LD4 638 aa21.09■□□□□ 0.97
DDX55-204ENST00000536079 KRT23Q9C075 422 aa21.09■□□□□ 0.97
DDX55-204ENST00000536079 MORF4L1Q9UBU8 362 aa21.09■□□□□ 0.97
DDX55-204ENST00000536079 RLFQ13129 1914 aa21.09■□□□□ 0.97
DDX55-204ENST00000536079 MYH4Q9Y623 1939 aa21.08■□□□□ 0.97
DDX55-204ENST00000536079 MCCP23508 829 aa21.08■□□□□ 0.97
DDX55-204ENST00000536079 DSG3P32926 999 aa21.08■□□□□ 0.97
DDX55-204ENST00000536079 COG2Q14746 738 aa21.08■□□□□ 0.97
DDX55-204ENST00000536079 FAM110CQ1W6H9 321 aa21.08■□□□□ 0.97
DDX55-204ENST00000536079 SAMD1Q6SPF0 538 aaPredicted RBP21.08■□□□□ 0.97
DDX55-204ENST00000536079 CHST3Q7LGC8 479 aa21.08■□□□□ 0.97
DDX55-204ENST00000536079 ATG4CQ96DT6 458 aa21.08■□□□□ 0.97
DDX55-204ENST00000536079 PAGR1Q9BTK6 254 aa21.08■□□□□ 0.97
DDX55-204ENST00000536079 MCOLN1Q9GZU1 580 aa21.08■□□□□ 0.97
DDX55-204ENST00000536079 CNNM2Q9H8M5 875 aa21.08■□□□□ 0.97
DDX55-204ENST00000536079 MTMR7Q9Y216 660 aa21.08■□□□□ 0.97
DDX55-204ENST00000536079 TRIM17Q9Y577 477 aa21.08■□□□□ 0.97
DDX55-204ENST00000536079 FLOT1O75955 427 aa21.07■□□□□ 0.96
DDX55-204ENST00000536079 PSMC4P43686 418 aa21.07■□□□□ 0.96
DDX55-204ENST00000536079 ANTXR2P58335 489 aa21.07■□□□□ 0.96
DDX55-204ENST00000536079 LBX2Q6XYB7 198 aa21.07■□□□□ 0.96
DDX55-204ENST00000536079 MB21D2Q8IYB1 491 aaPredicted RBP21.07■□□□□ 0.96
DDX55-204ENST00000536079 ENAHQ8N8S7 591 aaPredicted RBP21.07■□□□□ 0.96
DDX55-204ENST00000536079 ZSCAN10Q96SZ4 725 aaPredicted RBP21.07■□□□□ 0.96
DDX55-204ENST00000536079 SENP2Q9HC62 589 aa21.07■□□□□ 0.96
DDX55-204ENST00000536079 SYNPO2Q9UMS6 1093 aa21.07■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms