RNA–Protein interactions for RNA: ENST00000534705.5

USP48-215, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 4

Gene USP48, Length 566 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-215ENST00000534705 WNT10AQ9GZT5 417 aa6□□□□□ -1.45
USP48-215ENST00000534705 TACC3Q9Y6A5 838 aa6□□□□□ -1.45
USP48-215ENST00000534705 PRAMEF27A3QJZ7 478 aa5.99□□□□□ -1.45
USP48-215ENST00000534705 FITM1A5D6W6 292 aa5.99□□□□□ -1.45
USP48-215ENST00000534705 PWP1Q13610 501 aa5.99□□□□□ -1.45
USP48-215ENST00000534705 PHC3Q8NDX5 983 aa5.99□□□□□ -1.45
USP48-215ENST00000534705 RIN3Q8TB24 985 aa5.99□□□□□ -1.45
USP48-215ENST00000534705 DHX38Q92620 1227 aaKnown RBP5.99□□□□□ -1.45
USP48-215ENST00000534705 SYTL4Q96C24 671 aaPredicted RBP5.99□□□□□ -1.45
USP48-215ENST00000534705 TRIT1Q9H3H1 467 aaKnown RBP5.99□□□□□ -1.45
USP48-215ENST00000534705 ZNF552Q9H707 407 aaPredicted RBP5.99□□□□□ -1.45
USP48-215ENST00000534705 FBRSQ9HAH7 460 aa5.99□□□□□ -1.45
USP48-215ENST00000534705 MYOCOSA0A1B0GUC4 107 aa5.98□□□□□ -1.45
USP48-215ENST00000534705 CST3P01034 146 aaPredicted RBP5.98□□□□□ -1.45
USP48-215ENST00000534705 LMNB1P20700 586 aa5.98□□□□□ -1.45
USP48-215ENST00000534705 VAMP1P23763 118 aa5.98□□□□□ -1.45
USP48-215ENST00000534705 NR0B2Q15466 257 aa5.98□□□□□ -1.45
USP48-215ENST00000534705 DIEXFQ68CQ4 756 aaKnown RBP5.98□□□□□ -1.45
USP48-215ENST00000534705 ERMP1Q7Z2K6 904 aa5.98□□□□□ -1.45
USP48-215ENST00000534705 RSRP1Q9BUV0 290 aa5.98□□□□□ -1.45
USP48-215ENST00000534705 MIR1-1HGQ9H1L0 117 aa5.98□□□□□ -1.45
USP48-215ENST00000534705 SNCAIPQ9Y6H5 919 aa5.98□□□□□ -1.45
USP48-215ENST00000534705 TRIM13O60858 407 aa5.97□□□□□ -1.45
USP48-215ENST00000534705 CELA3BP08861 270 aa5.97□□□□□ -1.45
USP48-215ENST00000534705 TFE3P19532 575 aaPredicted RBP5.97□□□□□ -1.45
USP48-215ENST00000534705 TRHRP34981 398 aaPredicted RBP5.97□□□□□ -1.45
USP48-215ENST00000534705 ETF1P62495 437 aaKnown RBP5.97□□□□□ -1.45
USP48-215ENST00000534705 SNX17Q15036 470 aa5.97□□□□□ -1.45
USP48-215ENST00000534705 LRFN4Q6PJG9 635 aa5.97□□□□□ -1.45
USP48-215ENST00000534705 SPPL2CQ8IUH8 684 aa5.97□□□□□ -1.45
USP48-215ENST00000534705 INTS4Q96HW7 963 aaKnown RBP5.97□□□□□ -1.45
USP48-215ENST00000534705 RHOVQ96L33 236 aa5.97□□□□□ -1.45
USP48-215ENST00000534705 SP110Q9HB58 689 aa5.97□□□□□ -1.45
USP48-215ENST00000534705 YBX2Q9Y2T7 364 aaKnown RBP5.97□□□□□ -1.45
USP48-215ENST00000534705 ADRB1P08588 477 aa5.96□□□□□ -1.46
USP48-215ENST00000534705 TPP2P29144 1249 aaPredicted RBP5.96□□□□□ -1.46
USP48-215ENST00000534705 LMNB2Q03252 620 aa5.96□□□□□ -1.46
USP48-215ENST00000534705 PTPN11Q06124 597 aaPredicted RBP5.96□□□□□ -1.46
USP48-215ENST00000534705 INPP5AQ14642 412 aa5.96□□□□□ -1.46
USP48-215ENST00000534705 NKG7Q16617 165 aa5.96□□□□□ -1.46
USP48-215ENST00000534705 SKOR2Q2VWA4 1001 aaPredicted RBP5.96□□□□□ -1.46
USP48-215ENST00000534705 GGNQ86UU5 652 aa5.96□□□□□ -1.46
USP48-215ENST00000534705 TMEM74Q96NL1 305 aa5.96□□□□□ -1.46
USP48-215ENST00000534705 XYLT2Q9H1B5 865 aa5.96□□□□□ -1.46
USP48-215ENST00000534705 C19orf44Q9H6X5 657 aa5.96□□□□□ -1.46
USP48-215ENST00000534705 CCDC9Q9Y3X0 531 aaKnown RBP5.96□□□□□ -1.46
USP48-215ENST00000534705 PDE6BP35913 854 aa5.95□□□□□ -1.46
USP48-215ENST00000534705 ETV3P41162 512 aa5.95□□□□□ -1.46
USP48-215ENST00000534705 SEPT6Q14141 434 aa5.95□□□□□ -1.46
USP48-215ENST00000534705 MAP3K11Q16584 847 aa5.95□□□□□ -1.46
USP48-215ENST00000534705 TSNAXIP1Q2TAA8 658 aa5.95□□□□□ -1.46
USP48-215ENST00000534705 WIPI1Q5MNZ9 446 aaPredicted RBP5.95□□□□□ -1.46
USP48-215ENST00000534705 PRAMEF13Q5VWM6 474 aa5.95□□□□□ -1.46
USP48-215ENST00000534705 CDH24Q86UP0 819 aa5.95□□□□□ -1.46
USP48-215ENST00000534705 RGS22Q8NE09 1264 aa5.95□□□□□ -1.46
USP48-215ENST00000534705 PLPPR2Q96GM1 343 aa5.95□□□□□ -1.46
USP48-215ENST00000534705 GCM1Q9NP62 436 aa5.95□□□□□ -1.46
USP48-215ENST00000534705 KCNQ5Q9NR82 932 aa5.95□□□□□ -1.46
USP48-215ENST00000534705 PCDHB5Q9Y5E4 795 aa5.95□□□□□ -1.46
USP48-215ENST00000534705 GFRA2O00451 464 aa5.94□□□□□ -1.46
USP48-215ENST00000534705 ZGLP1P0C6A0 271 aa5.94□□□□□ -1.46
USP48-215ENST00000534705 NFKB2Q00653 900 aa5.94□□□□□ -1.46
USP48-215ENST00000534705 RPL6Q02878 288 aaKnown RBP5.94□□□□□ -1.46
USP48-215ENST00000534705 CHRNEQ04844 493 aa5.94□□□□□ -1.46
USP48-215ENST00000534705 GAB4Q2WGN9 574 aa5.94□□□□□ -1.46
USP48-215ENST00000534705 HS2ST1Q7LGA3 356 aa5.94□□□□□ -1.46
USP48-215ENST00000534705 RELL1Q8IUW5 271 aa5.94□□□□□ -1.46
USP48-215ENST00000534705 DUSP15Q9H1R2 295 aaPredicted RBP5.94□□□□□ -1.46
USP48-215ENST00000534705 TMPRSS5Q9H3S3 457 aa5.94□□□□□ -1.46
USP48-215ENST00000534705 METTL5Q9NRN9 209 aaKnown RBP5.94□□□□□ -1.46
USP48-215ENST00000534705 GPATCH2Q9NW75 528 aa5.94□□□□□ -1.46
USP48-215ENST00000534705 DUSP13Q9UII6 198 aa5.94□□□□□ -1.46
USP48-215ENST00000534705 CILPO75339 1184 aa5.93□□□□□ -1.46
USP48-215ENST00000534705 EGR3Q06889 387 aa5.93□□□□□ -1.46
USP48-215ENST00000534705 CAMK2GQ13555 558 aaPredicted RBP5.93□□□□□ -1.46
USP48-215ENST00000534705 LDLRAD1Q5T700 205 aa5.93□□□□□ -1.46
USP48-215ENST00000534705 PDZRN4Q6ZMN7 1036 aaPredicted RBP5.93□□□□□ -1.46
USP48-215ENST00000534705 XAGE3Q8WTP9 111 aa5.93□□□□□ -1.46
USP48-215ENST00000534705 GPR62Q9BZJ7 368 aa5.93□□□□□ -1.46
USP48-215ENST00000534705 TLR6Q9Y2C9 796 aa5.93□□□□□ -1.46
USP48-215ENST00000534705 FAM221AA4D161 298 aa5.92□□□□□ -1.46
USP48-215ENST00000534705 OTOL1A6NHN0 477 aaPredicted RBP5.92□□□□□ -1.46
USP48-215ENST00000534705 KRTAP10-2P60368 255 aa5.92□□□□□ -1.46
USP48-215ENST00000534705 GATAD2BQ8WXI9 593 aa5.92□□□□□ -1.46
USP48-215ENST00000534705 SIGLEC10Q96LC7 697 aa5.92□□□□□ -1.46
USP48-215ENST00000534705 SGPP1Q9BX95 441 aa5.92□□□□□ -1.46
USP48-215ENST00000534705 LRRC3Q9BY71 257 aa5.92□□□□□ -1.46
USP48-215ENST00000534705 IRAK3Q9Y616 596 aa5.92□□□□□ -1.46
USP48-215ENST00000534705 WASH4PA8MWX3 477 aa5.91□□□□□ -1.46
USP48-215ENST00000534705 BPNT1O95861 308 aa5.91□□□□□ -1.46
USP48-215ENST00000534705 RECKO95980 971 aa5.91□□□□□ -1.46
USP48-215ENST00000534705 PF4P02776 101 aa5.91□□□□□ -1.46
USP48-215ENST00000534705 GARTP22102 1010 aa5.91□□□□□ -1.46
USP48-215ENST00000534705 GRK4P32298 578 aa5.91□□□□□ -1.46
USP48-215ENST00000534705 GBP2P32456 591 aaPredicted RBP5.91□□□□□ -1.46
USP48-215ENST00000534705 AFF3P51826 1226 aaKnown RBP5.91□□□□□ -1.46
USP48-215ENST00000534705 DUSP4Q13115 394 aa5.91□□□□□ -1.46
USP48-215ENST00000534705 SSPNQ14714 243 aa5.91□□□□□ -1.46
USP48-215ENST00000534705 ZXDCQ2QGD7 858 aaPredicted RBP5.91□□□□□ -1.46
USP48-215ENST00000534705 SNAP47Q5SQN1 464 aa5.91□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 135.6 ms