RNA–Protein interactions for RNA: ENST00000532160.1

VPS26B-207, Transcript of VPS26, retromer complex component B, humanhuman

TSL 2

Gene VPS26B, Length 858 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26B-207ENST00000532160 MAPK4P31152 587 aa11.26□□□□□ -0.61
VPS26B-207ENST00000532160 CACNB2Q08289 660 aaPredicted RBP11.26□□□□□ -0.61
VPS26B-207ENST00000532160 TTF1Q15361 905 aaPredicted RBP11.26□□□□□ -0.61
VPS26B-207ENST00000532160 MORN1Q5T089 497 aa11.26□□□□□ -0.61
VPS26B-207ENST00000532160 KBTBD3Q8NAB2 608 aa11.26□□□□□ -0.61
VPS26B-207ENST00000532160 ACER1Q8TDN7 264 aa11.26□□□□□ -0.61
VPS26B-207ENST00000532160 C12orf42Q96LP6 360 aa11.26□□□□□ -0.61
VPS26B-207ENST00000532160 FEZ1Q99689 392 aa11.26□□□□□ -0.61
VPS26B-207ENST00000532160 GDF15Q99988 308 aa11.26□□□□□ -0.61
VPS26B-207ENST00000532160 SERPINB13Q9UIV8 391 aa11.26□□□□□ -0.61
VPS26B-207ENST00000532160 PDE6AP16499 860 aa11.25□□□□□ -0.61
VPS26B-207ENST00000532160 SDSP20132 328 aa11.25□□□□□ -0.61
VPS26B-207ENST00000532160 CCND3P30281 292 aaPredicted RBP11.25□□□□□ -0.61
VPS26B-207ENST00000532160 SHMT1P34896 483 aa11.25□□□□□ -0.61
VPS26B-207ENST00000532160 RGS2P41220 211 aa11.25□□□□□ -0.61
VPS26B-207ENST00000532160 PLCD1P51178 756 aa11.25□□□□□ -0.61
VPS26B-207ENST00000532160 EVX2Q03828 476 aa11.25□□□□□ -0.61
VPS26B-207ENST00000532160 MAP3K12Q12852 859 aa11.25□□□□□ -0.61
VPS26B-207ENST00000532160 RAB3GAP1Q15042 981 aa11.25□□□□□ -0.61
VPS26B-207ENST00000532160 SLC9C2Q5TAH2 1124 aa11.25□□□□□ -0.61
VPS26B-207ENST00000532160 PLEKHH3Q7Z736 793 aa11.25□□□□□ -0.61
VPS26B-207ENST00000532160 GTF3C2Q8WUA4 911 aaPredicted RBP11.25□□□□□ -0.61
VPS26B-207ENST00000532160 EVI5LQ96CN4 794 aa11.25□□□□□ -0.61
VPS26B-207ENST00000532160 APBA2Q99767 749 aa11.25□□□□□ -0.61
VPS26B-207ENST00000532160 EHD4Q9H223 541 aa11.25□□□□□ -0.61
VPS26B-207ENST00000532160 VCAM1P19320 739 aa11.24□□□□□ -0.61
VPS26B-207ENST00000532160 GUCY1A2P33402 732 aa11.24□□□□□ -0.61
VPS26B-207ENST00000532160 BMP8BP34820 402 aa11.24□□□□□ -0.61
VPS26B-207ENST00000532160 MAGEA10P43363 369 aaPredicted RBP11.24□□□□□ -0.61
VPS26B-207ENST00000532160 ABCB5Q2M3G0 1257 aa11.24□□□□□ -0.61
VPS26B-207ENST00000532160 CERKLQ49MI3 558 aaPredicted RBP11.24□□□□□ -0.61
VPS26B-207ENST00000532160 LHX8Q68G74 356 aa11.24□□□□□ -0.61
VPS26B-207ENST00000532160 CERS3Q8IU89 383 aa11.24□□□□□ -0.61
VPS26B-207ENST00000532160 CCAR1Q8IX12 1150 aaKnown RBP11.24□□□□□ -0.61
VPS26B-207ENST00000532160 RIOK1Q9BRS2 568 aaKnown RBP11.24□□□□□ -0.61
VPS26B-207ENST00000532160 RABGAP1Q9Y3P9 1069 aa11.24□□□□□ -0.61
VPS26B-207ENST00000532160 ZNF532Q9HCE3 1301 aa11.24□□□□□ -0.61
VPS26B-207ENST00000532160 TCRBV5S4A2TA0A5A2 114 aa11.23□□□□□ -0.61
VPS26B-207ENST00000532160 USP17L15C9J2P7 530 aa11.23□□□□□ -0.61
VPS26B-207ENST00000532160 USP17L13C9JLJ4 530 aa11.23□□□□□ -0.61
VPS26B-207ENST00000532160 USP17L11C9JVI0 530 aa11.23□□□□□ -0.61
VPS26B-207ENST00000532160 USP17L18D6R9N7 530 aa11.23□□□□□ -0.61
VPS26B-207ENST00000532160 USP17L22D6RA61 530 aa11.23□□□□□ -0.61
VPS26B-207ENST00000532160 USP17L17D6RBQ6 530 aa11.23□□□□□ -0.61
VPS26B-207ENST00000532160 USP17L19D6RCP7 530 aa11.23□□□□□ -0.61
VPS26B-207ENST00000532160 USP17L20D6RJB6 530 aa11.23□□□□□ -0.61
VPS26B-207ENST00000532160 COL6A1P12109 1028 aa11.23□□□□□ -0.61
VPS26B-207ENST00000532160 ADD2P35612 726 aa11.23□□□□□ -0.61
VPS26B-207ENST00000532160 USP17L24Q0WX57 530 aa11.23□□□□□ -0.61
VPS26B-207ENST00000532160 WDR78Q5VTH9 848 aa11.23□□□□□ -0.61
VPS26B-207ENST00000532160 CATSPERGQ6ZRH7 1159 aa11.23□□□□□ -0.61
VPS26B-207ENST00000532160 TRMT44Q8IYL2 757 aaKnown RBP11.23□□□□□ -0.61
VPS26B-207ENST00000532160 SEC62Q99442 399 aaKnown RBP11.23□□□□□ -0.61
VPS26B-207ENST00000532160 KIAA1683Q9H0B3 1180 aa11.23□□□□□ -0.61
VPS26B-207ENST00000532160 RPAP3Q9H6T3 665 aaPredicted RBP11.23□□□□□ -0.61
VPS26B-207ENST00000532160 FLRT1Q9NZU1 646 aa11.23□□□□□ -0.61
VPS26B-207ENST00000532160 BTBD7Q9P203 1132 aa11.23□□□□□ -0.61
VPS26B-207ENST00000532160 RLFQ13129 1914 aa11.23□□□□□ -0.61
VPS26B-207ENST00000532160 CUL9Q8IWT3 2517 aa11.23□□□□□ -0.61
VPS26B-207ENST00000532160 MAGEB6P1A0A0J9YX57 407 aa11.22□□□□□ -0.61
VPS26B-207ENST00000532160 SPDYE16A6NNV3 312 aaPredicted RBP11.22□□□□□ -0.61
VPS26B-207ENST00000532160 RNF113AO15541 343 aaKnown RBP11.22□□□□□ -0.61
VPS26B-207ENST00000532160 MYH8P13535 1937 aa11.22□□□□□ -0.61
VPS26B-207ENST00000532160 USP14P54578 494 aa11.22□□□□□ -0.61
VPS26B-207ENST00000532160 GABPAQ06546 454 aa11.22□□□□□ -0.61
VPS26B-207ENST00000532160 MAP2K5Q13163 448 aa11.22□□□□□ -0.61
VPS26B-207ENST00000532160 SEPT2Q15019 361 aa11.22□□□□□ -0.61
VPS26B-207ENST00000532160 LRRC26Q2I0M4 334 aa11.22□□□□□ -0.61
VPS26B-207ENST00000532160 TTC6Q86TZ1 520 aa11.22□□□□□ -0.61
VPS26B-207ENST00000532160 FAM227BQ96M60 508 aa11.22□□□□□ -0.61
VPS26B-207ENST00000532160 IPO9Q96P70 1041 aaKnown RBP11.22□□□□□ -0.61
VPS26B-207ENST00000532160 DDX24Q9GZR7 859 aaKnown RBP eCLIP11.22□□□□□ -0.61
VPS26B-207ENST00000532160 PUS7LQ9H0K6 701 aaKnown RBP11.22□□□□□ -0.61
VPS26B-207ENST00000532160 CWC22Q9HCG8 908 aaKnown RBP11.22□□□□□ -0.61
VPS26B-207ENST00000532160 BAZ2AQ9UIF9 1905 aaKnown RBP11.22□□□□□ -0.61
VPS26B-207ENST00000532160 A0A0G2JMZ2 1700 aa11.21□□□□□ -0.61
VPS26B-207ENST00000532160 A0A1W2PRG0 241 aa11.21□□□□□ -0.61
VPS26B-207ENST00000532160 SLC15A5A6NIM6 579 aa11.21□□□□□ -0.61
VPS26B-207ENST00000532160 M0R2C6 588 aa11.21□□□□□ -0.61
VPS26B-207ENST00000532160 POLR3DP05423 398 aaPredicted RBP11.21□□□□□ -0.61
VPS26B-207ENST00000532160 CYP2D6P10635 497 aa11.21□□□□□ -0.61
VPS26B-207ENST00000532160 PTPREP23469 700 aa11.21□□□□□ -0.61
VPS26B-207ENST00000532160 CCNA1P78396 465 aa11.21□□□□□ -0.61
VPS26B-207ENST00000532160 NMIQ13287 307 aaPredicted RBP11.21□□□□□ -0.61
VPS26B-207ENST00000532160 GRB14Q14449 540 aa11.21□□□□□ -0.61
VPS26B-207ENST00000532160 ZSCAN25Q6NSZ9 544 aa11.21□□□□□ -0.61
VPS26B-207ENST00000532160 LBX2Q6XYB7 198 aa11.21□□□□□ -0.61
VPS26B-207ENST00000532160 CCDC129Q6ZRS4 1044 aa11.21□□□□□ -0.61
VPS26B-207ENST00000532160 Q7L0L9 218 aa11.21□□□□□ -0.61
VPS26B-207ENST00000532160 SLC44A5Q8NCS7 719 aa11.21□□□□□ -0.61
VPS26B-207ENST00000532160 NPLOC4Q8TAT6 608 aa11.21□□□□□ -0.61
VPS26B-207ENST00000532160 SDR42E1Q8WUS8 393 aa11.21□□□□□ -0.61
VPS26B-207ENST00000532160 OSBP2Q969R2 916 aa11.21□□□□□ -0.61
VPS26B-207ENST00000532160 DDRGK1Q96HY6 314 aa11.21□□□□□ -0.61
VPS26B-207ENST00000532160 CABP5Q9NP86 173 aa11.21□□□□□ -0.61
VPS26B-207ENST00000532160 UNC80Q8N2C7 3258 aa11.2□□□□□ -0.62
VPS26B-207ENST00000532160 A0A0D9SFI3 127 aa11.2□□□□□ -0.62
VPS26B-207ENST00000532160 MBD4O95243 580 aa11.2□□□□□ -0.62
VPS26B-207ENST00000532160 UBE3CQ15386 1083 aa11.2□□□□□ -0.62
VPS26B-207ENST00000532160 BMP2KLQ5H9B9 411 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 74.8 ms