RNA–Protein interactions for RNA: ENST00000531050.5

PTPRK-219, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 1 (best)

Gene PTPRK, Length 2,515 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-219ENST00000531050 HIBCHQ6NVY1 386 aaPredicted RBP8.71□□□□□ -1.02
PTPRK-219ENST00000531050 WAPLQ7Z5K2 1190 aa8.71□□□□□ -1.02
PTPRK-219ENST00000531050 NBPF15Q8N660 670 aa8.71□□□□□ -1.02
PTPRK-219ENST00000531050 CCHCR1Q8TD31 782 aa8.71□□□□□ -1.02
PTPRK-219ENST00000531050 AGAP11Q8TF27 550 aa8.71□□□□□ -1.02
PTPRK-219ENST00000531050 FAM167BQ9BTA0 163 aa8.71□□□□□ -1.02
PTPRK-219ENST00000531050 OSBPL1AQ9BXW6 950 aa8.71□□□□□ -1.02
PTPRK-219ENST00000531050 UBE2OQ9C0C9 1292 aaKnown RBP8.71□□□□□ -1.02
PTPRK-219ENST00000531050 C19orf44Q9H6X5 657 aa8.71□□□□□ -1.02
PTPRK-219ENST00000531050 WDR35Q9P2L0 1181 aa8.71□□□□□ -1.02
PTPRK-219ENST00000531050 HDAC6Q9UBN7 1215 aa8.71□□□□□ -1.02
PTPRK-219ENST00000531050 TTF2Q9UNY4 1162 aaKnown RBP8.71□□□□□ -1.02
PTPRK-219ENST00000531050 MYH15Q9Y2K3 1946 aa8.71□□□□□ -1.02
PTPRK-219ENST00000531050 E7EVH7 732 aa8.71□□□□□ -1.02
PTPRK-219ENST00000531050 F6X3S4 739 aa8.71□□□□□ -1.02
PTPRK-219ENST00000531050 PPIP5K2O43314 1243 aa8.71□□□□□ -1.02
PTPRK-219ENST00000531050 SFSWAPQ12872 951 aaKnown RBP8.71□□□□□ -1.02
PTPRK-219ENST00000531050 QPCTQ16769 361 aa8.71□□□□□ -1.02
PTPRK-219ENST00000531050 CCDC57Q2TAC2 916 aa8.71□□□□□ -1.02
PTPRK-219ENST00000531050 EHBP1Q8NDI1 1231 aa8.71□□□□□ -1.02
PTPRK-219ENST00000531050 TEKT4Q8WW24 435 aa8.71□□□□□ -1.02
PTPRK-219ENST00000531050 HVCN1Q96D96 273 aa8.71□□□□□ -1.02
PTPRK-219ENST00000531050 NAA15Q9BXJ9 866 aaKnown RBP8.71□□□□□ -1.02
PTPRK-219ENST00000531050 NDST4Q9H3R1 872 aa8.71□□□□□ -1.02
PTPRK-219ENST00000531050 MAPK8IP1Q9UQF2 711 aa8.71□□□□□ -1.02
PTPRK-219ENST00000531050 LEMD3Q9Y2U8 911 aa8.71□□□□□ -1.02
PTPRK-219ENST00000531050 C2CD2Q9Y426 696 aa8.71□□□□□ -1.02
PTPRK-219ENST00000531050 EDC4Q6P2E9 1401 aaKnown RBP8.7□□□□□ -1.02
PTPRK-219ENST00000531050 AKAP12Q02952 1782 aa8.7□□□□□ -1.02
PTPRK-219ENST00000531050 NUTM2FA1L443 756 aa8.7□□□□□ -1.02
PTPRK-219ENST00000531050 SPDYE5A6NIY4 337 aa8.7□□□□□ -1.02
PTPRK-219ENST00000531050 ATP2C2O75185 946 aa8.7□□□□□ -1.02
PTPRK-219ENST00000531050 GHRP10912 638 aa8.7□□□□□ -1.02
PTPRK-219ENST00000531050 ZNF18P17022 549 aa8.7□□□□□ -1.02
PTPRK-219ENST00000531050 PAX3P23760 479 aa8.7□□□□□ -1.02
PTPRK-219ENST00000531050 GNAQP50148 359 aa8.7□□□□□ -1.02
PTPRK-219ENST00000531050 INHBCP55103 352 aa8.7□□□□□ -1.02
PTPRK-219ENST00000531050 MFSD4BQ5TF39 518 aa8.7□□□□□ -1.02
PTPRK-219ENST00000531050 PROCA1Q8NCQ7 364 aaPredicted RBP8.7□□□□□ -1.02
PTPRK-219ENST00000531050 CCT6BQ92526 530 aa8.7□□□□□ -1.02
PTPRK-219ENST00000531050 IQCGQ9H095 443 aaKnown RBP8.7□□□□□ -1.02
PTPRK-219ENST00000531050 ZNF510Q9Y2H8 683 aa8.7□□□□□ -1.02
PTPRK-219ENST00000531050 SH3TC1Q8TE82 1336 aa8.7□□□□□ -1.02
PTPRK-219ENST00000531050 CPS1P31327 1500 aa8.7□□□□□ -1.02
PTPRK-219ENST00000531050 ITSN1Q15811 1721 aa8.7□□□□□ -1.02
PTPRK-219ENST00000531050 FAM83GA6ND36 823 aa8.7□□□□□ -1.02
PTPRK-219ENST00000531050 RASSF10A6NK89 507 aa8.7□□□□□ -1.02
PTPRK-219ENST00000531050 SRGAP2O75044 1071 aa8.7□□□□□ -1.02
PTPRK-219ENST00000531050 LUC7L3O95232 432 aaKnown RBP8.7□□□□□ -1.02
PTPRK-219ENST00000531050 NPTXRO95502 500 aa8.7□□□□□ -1.02
PTPRK-219ENST00000531050 NR1D1P20393 614 aa8.7□□□□□ -1.02
PTPRK-219ENST00000531050 TUBP50607 506 aa8.7□□□□□ -1.02
PTPRK-219ENST00000531050 CCT4P50991 539 aaKnown RBP8.7□□□□□ -1.02
PTPRK-219ENST00000531050 PDE4BQ07343 736 aa8.7□□□□□ -1.02
PTPRK-219ENST00000531050 AKNAD1Q5T1N1 836 aa8.7□□□□□ -1.02
PTPRK-219ENST00000531050 SLC4A10Q6U841 1118 aa8.7□□□□□ -1.02
PTPRK-219ENST00000531050 DDX46Q7L014 1031 aaKnown RBP8.7□□□□□ -1.02
PTPRK-219ENST00000531050 SYCP3Q8IZU3 236 aa8.7□□□□□ -1.02
PTPRK-219ENST00000531050 RUFY2Q8WXA3 655 aa8.7□□□□□ -1.02
PTPRK-219ENST00000531050 MAP4K1Q92918 833 aa8.7□□□□□ -1.02
PTPRK-219ENST00000531050 DTNBP1Q96EV8 351 aa8.7□□□□□ -1.02
PTPRK-219ENST00000531050 ZIM3Q96PE6 472 aa8.7□□□□□ -1.02
PTPRK-219ENST00000531050 HINFPQ9BQA5 517 aa8.7□□□□□ -1.02
PTPRK-219ENST00000531050 PANK4Q9NVE7 773 aa8.7□□□□□ -1.02
PTPRK-219ENST00000531050 SUN2Q9UH99 717 aa8.7□□□□□ -1.02
PTPRK-219ENST00000531050 PHF24Q9UPV7 400 aa8.7□□□□□ -1.02
PTPRK-219ENST00000531050 C3P01024 1663 aa8.69□□□□□ -1.02
PTPRK-219ENST00000531050 EIF4E1BA6NMX2 242 aaKnown RBP8.69□□□□□ -1.02
PTPRK-219ENST00000531050 STXBP3O00186 592 aa8.69□□□□□ -1.02
PTPRK-219ENST00000531050 KRT14P02533 472 aa8.69□□□□□ -1.02
PTPRK-219ENST00000531050 HMOX1P09601 288 aa8.69□□□□□ -1.02
PTPRK-219ENST00000531050 ALADP13716 330 aa8.69□□□□□ -1.02
PTPRK-219ENST00000531050 NR1I3Q14994 352 aa8.69□□□□□ -1.02
PTPRK-219ENST00000531050 PPP1R7Q15435 360 aa8.69□□□□□ -1.02
PTPRK-219ENST00000531050 PABPC1LQ4VXU2 614 aaKnown RBP8.69□□□□□ -1.02
PTPRK-219ENST00000531050 LINC00301Q8NCQ3 95 aa8.69□□□□□ -1.02
PTPRK-219ENST00000531050 SEC16BQ96JE7 1060 aa8.69□□□□□ -1.02
PTPRK-219ENST00000531050 RPGRIP1Q96KN7 1286 aa8.69□□□□□ -1.02
PTPRK-219ENST00000531050 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP8.69□□□□□ -1.02
PTPRK-219ENST00000531050 METP08581 1390 aa8.69□□□□□ -1.02
PTPRK-219ENST00000531050 ZNF233A6NK53 670 aa8.69□□□□□ -1.02
PTPRK-219ENST00000531050 PDE2AO00408 941 aaPredicted RBP8.69□□□□□ -1.02
PTPRK-219ENST00000531050 ENC1O14682 589 aa8.69□□□□□ -1.02
PTPRK-219ENST00000531050 N4BP3O15049 544 aa8.69□□□□□ -1.02
PTPRK-219ENST00000531050 HSF2BPO75031 334 aa8.69□□□□□ -1.02
PTPRK-219ENST00000531050 FECHP22830 423 aa8.69□□□□□ -1.02
PTPRK-219ENST00000531050 CDC27P30260 824 aa8.69□□□□□ -1.02
PTPRK-219ENST00000531050 ALDH3A1P30838 453 aa8.69□□□□□ -1.02
PTPRK-219ENST00000531050 RBL2Q08999 1139 aa8.69□□□□□ -1.02
PTPRK-219ENST00000531050 SFMBT2Q5VUG0 894 aa8.69□□□□□ -1.02
PTPRK-219ENST00000531050 G2E3Q7L622 706 aa8.69□□□□□ -1.02
PTPRK-219ENST00000531050 HDAC7Q8WUI4 952 aa8.69□□□□□ -1.02
PTPRK-219ENST00000531050 P3H4Q92791 437 aa8.69□□□□□ -1.02
PTPRK-219ENST00000531050 RUFY1Q96T51 708 aa8.69□□□□□ -1.02
PTPRK-219ENST00000531050 ZWILCHQ9H900 591 aa8.69□□□□□ -1.02
PTPRK-219ENST00000531050 KCNMB3Q9NPA1 279 aa8.69□□□□□ -1.02
PTPRK-219ENST00000531050 ANKIB1Q9P2G1 1089 aa8.69□□□□□ -1.02
PTPRK-219ENST00000531050 GMNCA6NCL1 334 aa8.68□□□□□ -1.02
PTPRK-219ENST00000531050 C5orf60A6NFR6 353 aa8.68□□□□□ -1.02
PTPRK-219ENST00000531050 GOLGA6L10A6NI86 522 aa8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms