RNA–Protein interactions for RNA: ENST00000527154.5

CHMP4A-203, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 2

Gene CHMP4A, Length 571 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-203ENST00000527154 GPR108Q9NPR9 543 aa19.93■□□□□ 0.78
CHMP4A-203ENST00000527154 ERCC3P19447 782 aa19.92■□□□□ 0.78
CHMP4A-203ENST00000527154 GORABQ5T7V8 394 aa19.92■□□□□ 0.78
CHMP4A-203ENST00000527154 TRMT2AQ8IZ69 625 aaKnown RBP19.92■□□□□ 0.78
CHMP4A-203ENST00000527154 FERMT2Q96AC1 680 aa19.92■□□□□ 0.78
CHMP4A-203ENST00000527154 MAML3Q96JK9 1138 aa19.92■□□□□ 0.78
CHMP4A-203ENST00000527154 ASB2Q96Q27 587 aa19.92■□□□□ 0.78
CHMP4A-203ENST00000527154 API5Q9BZZ5 524 aaKnown RBP19.92■□□□□ 0.78
CHMP4A-203ENST00000527154 SAP30BPQ9UHR5 308 aaKnown RBP19.92■□□□□ 0.78
CHMP4A-203ENST00000527154 SERPINB13Q9UIV8 391 aa19.92■□□□□ 0.78
CHMP4A-203ENST00000527154 NOB1Q9ULX3 412 aaKnown RBP19.92■□□□□ 0.78
CHMP4A-203ENST00000527154 CHD7Q9P2D1 2997 aa19.92■□□□□ 0.78
CHMP4A-203ENST00000527154 HOXD11P31277 338 aaPredicted RBP19.91■□□□□ 0.78
CHMP4A-203ENST00000527154 SHMT1P34896 483 aa19.91■□□□□ 0.78
CHMP4A-203ENST00000527154 FPGSQ05932 587 aa19.91■□□□□ 0.78
CHMP4A-203ENST00000527154 COG2Q14746 738 aa19.91■□□□□ 0.78
CHMP4A-203ENST00000527154 CERS3Q8IU89 383 aa19.91■□□□□ 0.78
CHMP4A-203ENST00000527154 TIFAQ96CG3 184 aa19.91■□□□□ 0.78
CHMP4A-203ENST00000527154 XIRP2A4UGR9 3374 aa19.91■□□□□ 0.78
CHMP4A-203ENST00000527154 GNAI3P08754 354 aa19.9■□□□□ 0.78
CHMP4A-203ENST00000527154 CT47B1P0C2W7 299 aaPredicted RBP19.9■□□□□ 0.78
CHMP4A-203ENST00000527154 GABPAQ06546 454 aa19.9■□□□□ 0.78
CHMP4A-203ENST00000527154 FAAP100Q0VG06 881 aa19.9■□□□□ 0.78
CHMP4A-203ENST00000527154 CERKLQ49MI3 558 aaPredicted RBP19.9■□□□□ 0.78
CHMP4A-203ENST00000527154 PRAMEF19Q5SWL8 479 aa19.9■□□□□ 0.78
CHMP4A-203ENST00000527154 MB21D1Q8N884 522 aa19.9■□□□□ 0.78
CHMP4A-203ENST00000527154 MROH8Q9H579 483 aa19.9■□□□□ 0.78
CHMP4A-203ENST00000527154 SLC5A4Q9NY91 659 aa19.9■□□□□ 0.78
CHMP4A-203ENST00000527154 HOXC10Q9NYD6 342 aa19.9■□□□□ 0.78
CHMP4A-203ENST00000527154 A0A1W2PQ45 241 aaPredicted RBP19.89■□□□□ 0.77
CHMP4A-203ENST00000527154 A0A1W2PQY0 241 aa19.89■□□□□ 0.77
CHMP4A-203ENST00000527154 A0A1W2PRG0 241 aa19.89■□□□□ 0.77
CHMP4A-203ENST00000527154 RAG1P15918 1043 aa19.89■□□□□ 0.77
CHMP4A-203ENST00000527154 DYNLL1P63167 89 aaKnown RBP19.89■□□□□ 0.77
CHMP4A-203ENST00000527154 RAB3GAP1Q15042 981 aa19.89■□□□□ 0.77
CHMP4A-203ENST00000527154 ABCB5Q2M3G0 1257 aa19.89■□□□□ 0.77
CHMP4A-203ENST00000527154 THEGQ9P2T0 379 aa19.89■□□□□ 0.77
CHMP4A-203ENST00000527154 TBX21Q9UL17 535 aa19.89■□□□□ 0.77
CHMP4A-203ENST00000527154 MYH1P12882 1939 aa19.88■□□□□ 0.77
CHMP4A-203ENST00000527154 ADAMTS4O75173 837 aa19.88■□□□□ 0.77
CHMP4A-203ENST00000527154 ADAMTS19Q8TE59 1207 aa19.88■□□□□ 0.77
CHMP4A-203ENST00000527154 XPNPEP3Q9NQH7 507 aa19.88■□□□□ 0.77
CHMP4A-203ENST00000527154 SNRKQ9NRH2 765 aa19.88■□□□□ 0.77
CHMP4A-203ENST00000527154 ARIH1Q9Y4X5 557 aaPredicted RBP19.88■□□□□ 0.77
CHMP4A-203ENST00000527154 SMCHD1A6NHR9 2005 aa19.88■□□□□ 0.77
CHMP4A-203ENST00000527154 MYO5AQ9Y4I1 1855 aaKnown RBP19.88■□□□□ 0.77
CHMP4A-203ENST00000527154 TMED8Q6PL24 325 aaPredicted RBP19.87■□□□□ 0.77
CHMP4A-203ENST00000527154 C16orf59Q7L2K0 433 aa19.87■□□□□ 0.77
CHMP4A-203ENST00000527154 ARHGAP45Q92619 1136 aa19.87■□□□□ 0.77
CHMP4A-203ENST00000527154 BUD13Q9BRD0 619 aaKnown RBP eCLIP19.87■□□□□ 0.77
CHMP4A-203ENST00000527154 TSEN34Q9BSV6 310 aaKnown RBP19.87■□□□□ 0.77
CHMP4A-203ENST00000527154 PBX4Q9BYU1 374 aa19.87■□□□□ 0.77
CHMP4A-203ENST00000527154 PIH1D3Q9NQM4 214 aaKnown RBP19.87■□□□□ 0.77
CHMP4A-203ENST00000527154 SYNGAP1Q96PV0 1343 aa19.86■□□□□ 0.77
CHMP4A-203ENST00000527154 PNMA6EA0A0J9YXQ4 647 aa19.86■□□□□ 0.77
CHMP4A-203ENST00000527154 TIMP1P01033 207 aa19.86■□□□□ 0.77
CHMP4A-203ENST00000527154 RARBP10826 455 aa19.86■□□□□ 0.77
CHMP4A-203ENST00000527154 DSG3P32926 999 aa19.86■□□□□ 0.77
CHMP4A-203ENST00000527154 ADGRE1Q14246 886 aa19.86■□□□□ 0.77
CHMP4A-203ENST00000527154 CCSAPQ6IQ19 270 aaPredicted RBP19.86■□□□□ 0.77
CHMP4A-203ENST00000527154 RNF180Q86T96 592 aa19.86■□□□□ 0.77
CHMP4A-203ENST00000527154 TTC6Q86TZ1 520 aa19.86■□□□□ 0.77
CHMP4A-203ENST00000527154 FAM9BQ8IZU0 186 aa19.86■□□□□ 0.77
CHMP4A-203ENST00000527154 DBNDD2Q9BQY9 259 aa19.86■□□□□ 0.77
CHMP4A-203ENST00000527154 TMEM39AQ9NV64 488 aa19.86■□□□□ 0.77
CHMP4A-203ENST00000527154 DIS3Q9Y2L1 958 aaKnown RBP19.86■□□□□ 0.77
CHMP4A-203ENST00000527154 ZNF865P0CJ78 1059 aaPredicted RBP19.85■□□□□ 0.77
CHMP4A-203ENST00000527154 ZAP70P43403 619 aa19.85■□□□□ 0.77
CHMP4A-203ENST00000527154 PLCD1P51178 756 aa19.85■□□□□ 0.77
CHMP4A-203ENST00000527154 MRPS5P82675 430 aaKnown RBP19.85■□□□□ 0.77
CHMP4A-203ENST00000527154 MAP3K12Q12852 859 aa19.85■□□□□ 0.77
CHMP4A-203ENST00000527154 SEPT2Q15019 361 aa19.85■□□□□ 0.77
CHMP4A-203ENST00000527154 TNNI3KQ59H18 835 aa19.85■□□□□ 0.77
CHMP4A-203ENST00000527154 KIAA1755Q5JYT7 1200 aa19.85■□□□□ 0.77
CHMP4A-203ENST00000527154 TMEM240Q5SV17 173 aa19.85■□□□□ 0.77
CHMP4A-203ENST00000527154 MFSD5Q6N075 450 aa19.85■□□□□ 0.77
CHMP4A-203ENST00000527154 FAM122AQ96E09 287 aa19.85■□□□□ 0.77
CHMP4A-203ENST00000527154 UHRF1Q96T88 793 aaPredicted RBP19.85■□□□□ 0.77
CHMP4A-203ENST00000527154 GAS2L1Q99501 681 aaPredicted RBP19.85■□□□□ 0.77
CHMP4A-203ENST00000527154 CABP5Q9NP86 173 aa19.85■□□□□ 0.77
CHMP4A-203ENST00000527154 ADAMTS5Q9UNA0 930 aa19.85■□□□□ 0.77
CHMP4A-203ENST00000527154 FPGT-TNNI3KV9GXZ4 949 aa19.85■□□□□ 0.77
CHMP4A-203ENST00000527154 REV3LO60673 3130 aa19.84■□□□□ 0.77
CHMP4A-203ENST00000527154 ANP32CO43423 234 aa19.84■□□□□ 0.77
CHMP4A-203ENST00000527154 PQBP1O60828 265 aaKnown RBP19.84■□□□□ 0.77
CHMP4A-203ENST00000527154 PGK1P00558 417 aa19.84■□□□□ 0.77
CHMP4A-203ENST00000527154 CYP7A1P22680 504 aa19.84■□□□□ 0.77
CHMP4A-203ENST00000527154 G3BP1Q13283 466 aaKnown RBP eCLIP19.84■□□□□ 0.77
CHMP4A-203ENST00000527154 CCDC158Q5M9N0 1113 aa19.84■□□□□ 0.77
CHMP4A-203ENST00000527154 TTC39AQ5SRH9 613 aa19.84■□□□□ 0.77
CHMP4A-203ENST00000527154 SLC44A5Q8NCS7 719 aa19.84■□□□□ 0.77
CHMP4A-203ENST00000527154 KLHDC9Q8NEP7 349 aa19.84■□□□□ 0.77
CHMP4A-203ENST00000527154 PBX2P40425 430 aa19.83■□□□□ 0.77
CHMP4A-203ENST00000527154 CDK7P50613 346 aa19.83■□□□□ 0.77
CHMP4A-203ENST00000527154 ZNF792Q3KQV3 632 aa19.83■□□□□ 0.77
CHMP4A-203ENST00000527154 TINF2Q9BSI4 451 aa19.83■□□□□ 0.77
CHMP4A-203ENST00000527154 PARP14Q460N5 1801 aa19.82■□□□□ 0.76
CHMP4A-203ENST00000527154 MOXD2PA6NHM9 499 aa19.82■□□□□ 0.76
CHMP4A-203ENST00000527154 MYCNP04198 464 aaPredicted RBP19.82■□□□□ 0.76
CHMP4A-203ENST00000527154 FCER1AP12319 257 aa19.82■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms