RNA–Protein interactions for RNA: ENST00000519587.1

SDC2-203, Transcript of syndecan 2, humanhuman

TSL 4

Gene SDC2, Length 557 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-203ENST00000519587 IGDCC4Q8TDY8 1250 aa16.56■□□□□ 0.24
SDC2-203ENST00000519587 BRF1Q92994 677 aa16.56■□□□□ 0.24
SDC2-203ENST00000519587 OTUD5Q96G74 571 aa16.56■□□□□ 0.24
SDC2-203ENST00000519587 HHIPL1Q96JK4 782 aa16.56■□□□□ 0.24
SDC2-203ENST00000519587 AGXT2Q9BYV1 514 aa16.56■□□□□ 0.24
SDC2-203ENST00000519587 CLIP2Q9UDT6 1046 aa16.56■□□□□ 0.24
SDC2-203ENST00000519587 ZHX2Q9Y6X8 837 aa16.56■□□□□ 0.24
SDC2-203ENST00000519587 CALM1P0DP23 149 aa16.55■□□□□ 0.24
SDC2-203ENST00000519587 CALM2P0DP24 149 aa16.55■□□□□ 0.24
SDC2-203ENST00000519587 CALM3P0DP25 149 aa16.55■□□□□ 0.24
SDC2-203ENST00000519587 USP14P54578 494 aa16.55■□□□□ 0.24
SDC2-203ENST00000519587 DEFB115Q30KQ5 88 aa16.55■□□□□ 0.24
SDC2-203ENST00000519587 RCSD1Q6JBY9 416 aa16.55■□□□□ 0.24
SDC2-203ENST00000519587 SGMS1Q86VZ5 419 aa16.55■□□□□ 0.24
SDC2-203ENST00000519587 PNMA1Q8ND90 353 aa16.55■□□□□ 0.24
SDC2-203ENST00000519587 MKL1Q969V6 931 aa16.55■□□□□ 0.24
SDC2-203ENST00000519587 OPTNQ96CV9 577 aa16.55■□□□□ 0.24
SDC2-203ENST00000519587 KIAA1683Q9H0B3 1180 aa16.55■□□□□ 0.24
SDC2-203ENST00000519587 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.55■□□□□ 0.24
SDC2-203ENST00000519587 FRMD4AQ9P2Q2 1039 aaPredicted RBP16.55■□□□□ 0.24
SDC2-203ENST00000519587 SLC12A7Q9Y666 1083 aa16.55■□□□□ 0.24
SDC2-203ENST00000519587 LOC285556D6RIA3 1793 aa16.55■□□□□ 0.24
SDC2-203ENST00000519587 WDR33Q9C0J8 1336 aaKnown RBP16.54■□□□□ 0.24
SDC2-203ENST00000519587 TRIM75PA6NK02 468 aa16.54■□□□□ 0.24
SDC2-203ENST00000519587 C19orf81C9J6K1 198 aa16.54■□□□□ 0.24
SDC2-203ENST00000519587 USP17L10C9JJH3 530 aa16.54■□□□□ 0.24
SDC2-203ENST00000519587 DDAH1O94760 285 aa16.54■□□□□ 0.24
SDC2-203ENST00000519587 ZBTB48P10074 688 aaPredicted RBP16.54■□□□□ 0.24
SDC2-203ENST00000519587 RCAN1P53805 252 aa16.54■□□□□ 0.24
SDC2-203ENST00000519587 COL9A3Q14050 684 aaPredicted RBP16.54■□□□□ 0.24
SDC2-203ENST00000519587 ZNF654Q8IZM8 581 aa16.54■□□□□ 0.24
SDC2-203ENST00000519587 LRRC47Q8N1G4 583 aaKnown RBP16.54■□□□□ 0.24
SDC2-203ENST00000519587 GMCL1P1Q8NEA9 526 aa16.54■□□□□ 0.24
SDC2-203ENST00000519587 TMEM47Q9BQJ4 181 aa16.54■□□□□ 0.24
SDC2-203ENST00000519587 NAP1L2Q9ULW6 460 aaPredicted RBP16.54■□□□□ 0.24
SDC2-203ENST00000519587 TMX2Q9Y320 296 aa16.54■□□□□ 0.24
SDC2-203ENST00000519587 KLF18A0A0U1RQI7 1052 aa16.53■□□□□ 0.24
SDC2-203ENST00000519587 GOLGA8BA8MQT2 603 aa16.53■□□□□ 0.24
SDC2-203ENST00000519587 CXCL11O14625 94 aa16.53■□□□□ 0.24
SDC2-203ENST00000519587 ZNF157P51786 506 aaPredicted RBP16.53■□□□□ 0.24
SDC2-203ENST00000519587 AK2P54819 239 aa16.53■□□□□ 0.24
SDC2-203ENST00000519587 SPP2Q13103 211 aa16.53■□□□□ 0.24
SDC2-203ENST00000519587 MTMR2Q13614 643 aa16.53■□□□□ 0.24
SDC2-203ENST00000519587 TOB2Q14106 344 aaPredicted RBP16.53■□□□□ 0.24
SDC2-203ENST00000519587 RGMBQ6NW40 437 aa16.53■□□□□ 0.24
SDC2-203ENST00000519587 APOA5Q6Q788 366 aa16.53■□□□□ 0.24
SDC2-203ENST00000519587 CCDC84Q86UT8 332 aaPredicted RBP16.53■□□□□ 0.24
SDC2-203ENST00000519587 LPAR1Q92633 364 aa16.53■□□□□ 0.24
SDC2-203ENST00000519587 WNK4Q96J92 1243 aa16.53■□□□□ 0.24
SDC2-203ENST00000519587 VCPKMTQ9H867 229 aa16.53■□□□□ 0.24
SDC2-203ENST00000519587 TMOD4Q9NZQ9 345 aa16.53■□□□□ 0.24
SDC2-203ENST00000519587 AFG3L2Q9Y4W6 797 aa16.53■□□□□ 0.24
SDC2-203ENST00000519587 ZBTB43O43298 467 aa16.52■□□□□ 0.24
SDC2-203ENST00000519587 RAD21O60216 631 aa16.52■□□□□ 0.24
SDC2-203ENST00000519587 KIF5BP33176 963 aa16.52■□□□□ 0.24
SDC2-203ENST00000519587 ECE1P42892 770 aa16.52■□□□□ 0.24
SDC2-203ENST00000519587 BACE1P56817 501 aa16.52■□□□□ 0.24
SDC2-203ENST00000519587 APOBRQ0VD83 1088 aa16.52■□□□□ 0.24
SDC2-203ENST00000519587 SNAPC2Q13487 334 aa16.52■□□□□ 0.24
SDC2-203ENST00000519587 USP17L2Q6R6M4 530 aa16.52■□□□□ 0.24
SDC2-203ENST00000519587 ACER1Q8TDN7 264 aa16.52■□□□□ 0.24
SDC2-203ENST00000519587 CCDC102AQ96A19 550 aa16.52■□□□□ 0.24
SDC2-203ENST00000519587 CHMP4CQ96CF2 233 aa16.52■□□□□ 0.24
SDC2-203ENST00000519587 GPHNQ9NQX3 736 aaPredicted RBP16.52■□□□□ 0.24
SDC2-203ENST00000519587 KCNH4Q9UQ05 1017 aa16.52■□□□□ 0.24
SDC2-203ENST00000519587 GTF2A2P52657 109 aa16.51■□□□□ 0.23
SDC2-203ENST00000519587 EVCP57679 992 aa16.51■□□□□ 0.23
SDC2-203ENST00000519587 ZYXQ15942 572 aaKnown RBP16.51■□□□□ 0.23
SDC2-203ENST00000519587 SPRYD7Q5W111 196 aa16.51■□□□□ 0.23
SDC2-203ENST00000519587 PAXIP1Q6ZW49 1069 aaPredicted RBP16.51■□□□□ 0.23
SDC2-203ENST00000519587 NOL8Q76FK4 1167 aaKnown RBP16.51■□□□□ 0.23
SDC2-203ENST00000519587 MICU3Q86XE3 530 aa16.51■□□□□ 0.23
SDC2-203ENST00000519587 RASAL3Q86YV0 1011 aa16.51■□□□□ 0.23
SDC2-203ENST00000519587 SIAH1Q8IUQ4 282 aa16.51■□□□□ 0.23
SDC2-203ENST00000519587 CTCFLQ8NI51 663 aaPredicted RBP16.51■□□□□ 0.23
SDC2-203ENST00000519587 DCAF4Q8WV16 495 aa16.51■□□□□ 0.23
SDC2-203ENST00000519587 CNKSR2Q8WXI2 1034 aa16.51■□□□□ 0.23
SDC2-203ENST00000519587 ZSCAN31Q96LW9 406 aaPredicted RBP16.51■□□□□ 0.23
SDC2-203ENST00000519587 MAP3K14Q99558 947 aa16.51■□□□□ 0.23
SDC2-203ENST00000519587 SH2B1Q9NRF2 756 aaPredicted RBP16.51■□□□□ 0.23
SDC2-203ENST00000519587 ISY1Q9ULR0 285 aaKnown RBP16.51■□□□□ 0.23
SDC2-203ENST00000519587 LIMCH1Q9UPQ0 1083 aa16.51■□□□□ 0.23
SDC2-203ENST00000519587 TNRC18O15417 2968 aaPredicted RBP16.5■□□□□ 0.23
SDC2-203ENST00000519587 A0A1W2PRG0 241 aa16.5■□□□□ 0.23
SDC2-203ENST00000519587 GOLGA8AA7E2F4 631 aa16.5■□□□□ 0.23
SDC2-203ENST00000519587 F5H6K3 240 aa16.5■□□□□ 0.23
SDC2-203ENST00000519587 IRF6O14896 467 aa16.5■□□□□ 0.23
SDC2-203ENST00000519587 NDUFB10O96000 172 aa16.5■□□□□ 0.23
SDC2-203ENST00000519587 SLC10A3P09131 477 aa16.5■□□□□ 0.23
SDC2-203ENST00000519587 ANP32AP39687 249 aaKnown RBP16.5■□□□□ 0.23
SDC2-203ENST00000519587 METAP2P50579 478 aaKnown RBP eCLIP16.5■□□□□ 0.23
SDC2-203ENST00000519587 HMGCS2P54868 508 aa16.5■□□□□ 0.23
SDC2-203ENST00000519587 KLRC3Q07444 240 aa16.5■□□□□ 0.23
SDC2-203ENST00000519587 PPP2R5BQ15173 497 aa16.5■□□□□ 0.23
SDC2-203ENST00000519587 CCDC96Q2M329 555 aa16.5■□□□□ 0.23
SDC2-203ENST00000519587 ASPRV1Q53RT3 343 aa16.5■□□□□ 0.23
SDC2-203ENST00000519587 GPATCH4Q5T3I0 446 aaKnown RBP16.5■□□□□ 0.23
SDC2-203ENST00000519587 SLFN13Q68D06 897 aa16.5■□□□□ 0.23
SDC2-203ENST00000519587 HSCBQ8IWL3 235 aa16.5■□□□□ 0.23
SDC2-203ENST00000519587 NUP133Q8WUM0 1156 aa16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 68.3 ms