RNA–Protein interactions for RNA: ENST00000519177.5

SNTB1-203, Transcript of syntrophin beta 1, humanhuman

TSL 1 (best)

Gene SNTB1, Length 1,962 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNTB1-203ENST00000519177 TMEM47Q9BQJ4 181 aa21.39■■□□□ 1.02
SNTB1-203ENST00000519177 MYH1P12882 1939 aa21.39■■□□□ 1.02
SNTB1-203ENST00000519177 RGPD3A6NKT7 1758 aaPredicted RBP21.39■■□□□ 1.01
SNTB1-203ENST00000519177 RGPD4Q7Z3J3 1758 aa21.39■■□□□ 1.01
SNTB1-203ENST00000519177 ATP2B1P20020 1258 aa21.39■■□□□ 1.01
SNTB1-203ENST00000519177 NLRP5P59047 1200 aa21.39■■□□□ 1.01
SNTB1-203ENST00000519177 GRIN1Q05586 938 aa21.39■■□□□ 1.01
SNTB1-203ENST00000519177 MRFAP1L1Q96HT8 127 aa21.39■■□□□ 1.01
SNTB1-203ENST00000519177 TNS1Q9HBL0 1735 aaKnown RBP21.38■■□□□ 1.01
SNTB1-203ENST00000519177 CALML3P27482 149 aa21.38■■□□□ 1.01
SNTB1-203ENST00000519177 RXRBP28702 533 aa21.38■■□□□ 1.01
SNTB1-203ENST00000519177 OLFM4Q6UX06 510 aa21.38■■□□□ 1.01
SNTB1-203ENST00000519177 METTL16Q86W50 562 aaKnown RBP21.38■■□□□ 1.01
SNTB1-203ENST00000519177 STAG2Q8N3U4 1231 aa21.38■■□□□ 1.01
SNTB1-203ENST00000519177 CERS5Q8N5B7 392 aa21.38■■□□□ 1.01
SNTB1-203ENST00000519177 LZTS2Q9BRK4 669 aa21.38■■□□□ 1.01
SNTB1-203ENST00000519177 TRAPPC10P48553 1259 aa21.37■■□□□ 1.01
SNTB1-203ENST00000519177 PIBF1Q8WXW3 757 aa21.37■■□□□ 1.01
SNTB1-203ENST00000519177 HOOK1Q9UJC3 728 aaKnown RBP21.37■■□□□ 1.01
SNTB1-203ENST00000519177 STX8Q9UNK0 236 aa21.37■■□□□ 1.01
SNTB1-203ENST00000519177 PALM3A6NDB9 673 aaPredicted RBP21.37■■□□□ 1.01
SNTB1-203ENST00000519177 BIN1O00499 593 aa21.37■■□□□ 1.01
SNTB1-203ENST00000519177 SPECC1Q5M775 1068 aa21.37■■□□□ 1.01
SNTB1-203ENST00000519177 FBXW7Q969H0 707 aa21.37■■□□□ 1.01
SNTB1-203ENST00000519177 FERMT2Q96AC1 680 aa21.37■■□□□ 1.01
SNTB1-203ENST00000519177 KCNF1Q9H3M0 494 aa21.37■■□□□ 1.01
SNTB1-203ENST00000519177 VEGFAP15692 232 aaPredicted RBP21.36■■□□□ 1.01
SNTB1-203ENST00000519177 NOVP48745 357 aa21.36■■□□□ 1.01
SNTB1-203ENST00000519177 MDM2Q00987 491 aaPredicted RBP21.36■■□□□ 1.01
SNTB1-203ENST00000519177 PNOCQ13519 176 aa21.36■■□□□ 1.01
SNTB1-203ENST00000519177 TTC38Q5R3I4 469 aa21.36■■□□□ 1.01
SNTB1-203ENST00000519177 DRC7Q8IY82 874 aa21.36■■□□□ 1.01
SNTB1-203ENST00000519177 CSRNP2Q9H175 543 aa21.36■■□□□ 1.01
SNTB1-203ENST00000519177 DOK7Q18PE1 504 aa21.36■■□□□ 1.01
SNTB1-203ENST00000519177 FAM177A1Q8N128 213 aaPredicted RBP21.36■■□□□ 1.01
SNTB1-203ENST00000519177 TTF2Q9UNY4 1162 aaKnown RBP21.36■■□□□ 1.01
SNTB1-203ENST00000519177 SMTNL1A8MU46 457 aa21.35■■□□□ 1.01
SNTB1-203ENST00000519177 MSL1Q68DK7 614 aa21.35■■□□□ 1.01
SNTB1-203ENST00000519177 STYK1Q6J9G0 422 aa21.35■■□□□ 1.01
SNTB1-203ENST00000519177 CLIP2Q9UDT6 1046 aa21.35■■□□□ 1.01
SNTB1-203ENST00000519177 IKBKBO14920 756 aa21.34■■□□□ 1.01
SNTB1-203ENST00000519177 POLR2DO15514 142 aaKnown RBP21.34■■□□□ 1.01
SNTB1-203ENST00000519177 NOM1Q5C9Z4 860 aaKnown RBP21.34■■□□□ 1.01
SNTB1-203ENST00000519177 KANK3Q6NY19 840 aa21.34■■□□□ 1.01
SNTB1-203ENST00000519177 C2CD5Q86YS7 1000 aa21.34■■□□□ 1.01
SNTB1-203ENST00000519177 ZNF622Q969S3 477 aaKnown RBP eCLIP21.34■■□□□ 1.01
SNTB1-203ENST00000519177 PLIN4Q96Q06 1357 aa21.34■■□□□ 1.01
SNTB1-203ENST00000519177 TOP1P11387 765 aaKnown RBP21.34■■□□□ 1.01
SNTB1-203ENST00000519177 PTGS1P23219 599 aa21.34■■□□□ 1.01
SNTB1-203ENST00000519177 GABPAQ06546 454 aa21.34■■□□□ 1.01
SNTB1-203ENST00000519177 SLC35G1Q2M3R5 365 aa21.34■■□□□ 1.01
SNTB1-203ENST00000519177 HHIPL2Q6UWX4 724 aa21.34■■□□□ 1.01
SNTB1-203ENST00000519177 CCDC186Q7Z3E2 898 aa21.34■■□□□ 1.01
SNTB1-203ENST00000519177 FOXP4Q8IVH2 680 aaPredicted RBP21.34■■□□□ 1.01
SNTB1-203ENST00000519177 BLIDQ8IZY5 108 aa21.34■■□□□ 1.01
SNTB1-203ENST00000519177 PCDHA4Q9UN74 947 aa21.34■■□□□ 1.01
SNTB1-203ENST00000519177 F8W031 263 aaPredicted RBP21.33■■□□□ 1.01
SNTB1-203ENST00000519177 G3V3G9 751 aa21.33■■□□□ 1.01
SNTB1-203ENST00000519177 WNT7AO00755 349 aa21.33■■□□□ 1.01
SNTB1-203ENST00000519177 CYTH3O43739 400 aa21.33■■□□□ 1.01
SNTB1-203ENST00000519177 TPM4P67936 248 aa21.33■■□□□ 1.01
SNTB1-203ENST00000519177 ATP2C1P98194 919 aaPredicted RBP21.33■■□□□ 1.01
SNTB1-203ENST00000519177 ZNF174Q15697 407 aa21.33■■□□□ 1.01
SNTB1-203ENST00000519177 DCAF8Q5TAQ9 597 aa21.33■■□□□ 1.01
SNTB1-203ENST00000519177 GALNT17Q6IS24 598 aa21.33■■□□□ 1.01
SNTB1-203ENST00000519177 PIK3AP1Q6ZUJ8 805 aa21.33■■□□□ 1.01
SNTB1-203ENST00000519177 PODNQ7Z5L7 613 aa21.33■■□□□ 1.01
SNTB1-203ENST00000519177 SPZ1Q9BXG8 430 aa21.33■■□□□ 1.01
SNTB1-203ENST00000519177 PCDHA5Q9Y5H7 936 aa21.33■■□□□ 1.01
SNTB1-203ENST00000519177 SMARCA1P28370 1054 aa21.32■■□□□ 1
SNTB1-203ENST00000519177 NCAPHQ15003 741 aa21.32■■□□□ 1
SNTB1-203ENST00000519177 POSTNQ15063 836 aa21.32■■□□□ 1
SNTB1-203ENST00000519177 NT5DC1Q5TFE4 455 aa21.32■■□□□ 1
SNTB1-203ENST00000519177 DAGLBQ8NCG7 672 aa21.32■■□□□ 1
SNTB1-203ENST00000519177 CCDC148Q8NFR7 591 aa21.32■■□□□ 1
SNTB1-203ENST00000519177 CEP95Q96GE4 821 aa21.32■■□□□ 1
SNTB1-203ENST00000519177 NAP1L5Q96NT1 182 aaPredicted RBP21.32■■□□□ 1
SNTB1-203ENST00000519177 SERTAD1Q9UHV2 236 aa21.32■■□□□ 1
SNTB1-203ENST00000519177 BAZ2BQ9UIF8 2168 aaKnown RBP21.32■■□□□ 1
SNTB1-203ENST00000519177 H0YIN7 160 aa21.32■■□□□ 1
SNTB1-203ENST00000519177 ACTN4O43707 911 aaKnown RBP21.32■■□□□ 1
SNTB1-203ENST00000519177 PICALMQ13492 652 aa21.32■■□□□ 1
SNTB1-203ENST00000519177 NOLC1Q14978 699 aaKnown RBP eCLIP21.32■■□□□ 1
SNTB1-203ENST00000519177 KIAA1524Q8TCG1 905 aa21.32■■□□□ 1
SNTB1-203ENST00000519177 GPKOWQ92917 476 aaPredicted RBP eCLIP21.32■■□□□ 1
SNTB1-203ENST00000519177 MXD3Q9BW11 206 aa21.32■■□□□ 1
SNTB1-203ENST00000519177 SPTLC3Q9NUV7 552 aa21.32■■□□□ 1
SNTB1-203ENST00000519177 USP40Q9NVE5 1235 aa21.32■■□□□ 1
SNTB1-203ENST00000519177 NRBP1Q9UHY1 535 aa21.32■■□□□ 1
SNTB1-203ENST00000519177 KLRF2D3W0D1 207 aa21.31■■□□□ 1
SNTB1-203ENST00000519177 M0R2N6 131 aa21.31■■□□□ 1
SNTB1-203ENST00000519177 PARP1P09874 1014 aaKnown RBP21.31■■□□□ 1
SNTB1-203ENST00000519177 USP49Q70CQ1 688 aa21.31■■□□□ 1
SNTB1-203ENST00000519177 DDX4Q9NQI0 724 aaKnown RBP21.31■■□□□ 1
SNTB1-203ENST00000519177 BARHL2Q9NY43 387 aa21.31■■□□□ 1
SNTB1-203ENST00000519177 FOXN1O15353 648 aa21.3■■□□□ 1
SNTB1-203ENST00000519177 FKBP1AP62942 108 aaKnown RBP21.3■■□□□ 1
SNTB1-203ENST00000519177 PTGDRQ13258 359 aa21.3■■□□□ 1
SNTB1-203ENST00000519177 WWC2Q6AWC2 1192 aa21.3■■□□□ 1
SNTB1-203ENST00000519177 ISM2Q6H9L7 571 aa21.3■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms