RNA–Protein interactions for RNA: ENST00000518385.5

SDC2-202, Transcript of syndecan 2, humanhuman

TSL 5 BASIC

Gene SDC2, Length 1,583 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-202ENST00000518385 C11orf57Q6ZUT1 292 aaPredicted RBP20.97■□□□□ 0.95
SDC2-202ENST00000518385 CATIPQ7Z7H3 387 aa20.97■□□□□ 0.95
SDC2-202ENST00000518385 RAB11FIP4Q86YS3 637 aa20.97■□□□□ 0.95
SDC2-202ENST00000518385 POLR3EQ9NVU0 708 aa20.97■□□□□ 0.95
SDC2-202ENST00000518385 FER1L6Q2WGJ9 1857 aa20.96■□□□□ 0.95
SDC2-202ENST00000518385 CCDC66A2RUB6 948 aa20.96■□□□□ 0.95
SDC2-202ENST00000518385 RANBP6O60518 1105 aaKnown RBP20.96■□□□□ 0.95
SDC2-202ENST00000518385 DDAH1O94760 285 aa20.96■□□□□ 0.95
SDC2-202ENST00000518385 GUCY1B3Q02153 619 aa20.96■□□□□ 0.95
SDC2-202ENST00000518385 KIF23Q02241 960 aaPredicted RBP20.96■□□□□ 0.95
SDC2-202ENST00000518385 IFIT1BQ5T764 474 aaKnown RBP20.96■□□□□ 0.95
SDC2-202ENST00000518385 C12orf60Q5U649 245 aa20.96■□□□□ 0.95
SDC2-202ENST00000518385 FSIP1Q8NA03 581 aa20.96■□□□□ 0.95
SDC2-202ENST00000518385 MRIQ9BWK5 157 aa20.96■□□□□ 0.95
SDC2-202ENST00000518385 ZNF287Q9HBT7 754 aa20.96■□□□□ 0.95
SDC2-202ENST00000518385 ROBO3Q96MS0 1386 aa20.96■□□□□ 0.95
SDC2-202ENST00000518385 DEXIO95424 95 aa20.95■□□□□ 0.94
SDC2-202ENST00000518385 TPM1P09493 284 aa20.95■□□□□ 0.94
SDC2-202ENST00000518385 KRT40Q6A162 431 aa20.95■□□□□ 0.94
SDC2-202ENST00000518385 FMR1NBQ8N0W7 255 aaPredicted RBP20.95■□□□□ 0.94
SDC2-202ENST00000518385 ENAHQ8N8S7 591 aaPredicted RBP20.95■□□□□ 0.94
SDC2-202ENST00000518385 TIGD1Q96MW7 591 aa20.95■□□□□ 0.94
SDC2-202ENST00000518385 USP28Q96RU2 1077 aa20.95■□□□□ 0.94
SDC2-202ENST00000518385 ZKSCAN3Q9BRR0 538 aa20.95■□□□□ 0.94
SDC2-202ENST00000518385 TAOK3Q9H2K8 898 aa20.95■□□□□ 0.94
SDC2-202ENST00000518385 MCM9Q9NXL9 1143 aa20.95■□□□□ 0.94
SDC2-202ENST00000518385 TTF2Q9UNY4 1162 aaKnown RBP20.95■□□□□ 0.94
SDC2-202ENST00000518385 SPDYE4A6NLX3 237 aa20.94■□□□□ 0.94
SDC2-202ENST00000518385 IKBKBO14920 756 aa20.94■□□□□ 0.94
SDC2-202ENST00000518385 FOSBP53539 338 aa20.94■□□□□ 0.94
SDC2-202ENST00000518385 MYSM1Q5VVJ2 828 aa20.94■□□□□ 0.94
SDC2-202ENST00000518385 FCHSD1Q86WN1 690 aa20.94■□□□□ 0.94
SDC2-202ENST00000518385 CRACR2BQ8N4Y2 399 aaPredicted RBP20.94■□□□□ 0.94
SDC2-202ENST00000518385 RNF26Q9BY78 433 aaPredicted RBP20.94■□□□□ 0.94
SDC2-202ENST00000518385 LTBP3Q9NS15 1303 aa20.94■□□□□ 0.94
SDC2-202ENST00000518385 ZNF646O15015 1829 aaPredicted RBP20.94■□□□□ 0.94
SDC2-202ENST00000518385 CYP2D7A0A087X1C5 515 aa20.93■□□□□ 0.94
SDC2-202ENST00000518385 NFKBIEO00221 500 aa20.93■□□□□ 0.94
SDC2-202ENST00000518385 CBFA2T2O43439 604 aa20.93■□□□□ 0.94
SDC2-202ENST00000518385 RXRAP19793 462 aa20.93■□□□□ 0.94
SDC2-202ENST00000518385 BTDP43251 543 aa20.93■□□□□ 0.94
SDC2-202ENST00000518385 HHIPL2Q6UWX4 724 aa20.93■□□□□ 0.94
SDC2-202ENST00000518385 SH3RF3Q8TEJ3 882 aaPredicted RBP20.93■□□□□ 0.94
SDC2-202ENST00000518385 PHKBQ93100 1093 aa20.93■□□□□ 0.94
SDC2-202ENST00000518385 SLC26A6Q9BXS9 759 aa20.93■□□□□ 0.94
SDC2-202ENST00000518385 F8W031 263 aaPredicted RBP20.93■□□□□ 0.94
SDC2-202ENST00000518385 ATP8B1O43520 1251 aa20.93■□□□□ 0.94
SDC2-202ENST00000518385 ME1P48163 572 aa20.93■□□□□ 0.94
SDC2-202ENST00000518385 BMS1Q14692 1282 aaKnown RBP20.93■□□□□ 0.94
SDC2-202ENST00000518385 SAFBQ15424 915 aaKnown RBP eCLIP20.93■□□□□ 0.94
SDC2-202ENST00000518385 NBPF11Q86T75 865 aa20.93■□□□□ 0.94
SDC2-202ENST00000518385 ANKS1AQ92625 1134 aa20.93■□□□□ 0.94
SDC2-202ENST00000518385 MAP3K14Q99558 947 aa20.93■□□□□ 0.94
SDC2-202ENST00000518385 MYL10Q9BUA6 226 aa20.93■□□□□ 0.94
SDC2-202ENST00000518385 FHDC1Q9C0D6 1143 aaPredicted RBP20.93■□□□□ 0.94
SDC2-202ENST00000518385 KIAA1468Q9P260 1216 aa20.93■□□□□ 0.94
SDC2-202ENST00000518385 ZHX1Q9UKY1 873 aaPredicted RBP20.93■□□□□ 0.94
SDC2-202ENST00000518385 ZNRF3Q9ULT6 936 aa20.93■□□□□ 0.94
SDC2-202ENST00000518385 DAGLAQ9Y4D2 1042 aa20.93■□□□□ 0.94
SDC2-202ENST00000518385 COL4A5P29400 1685 aa20.92■□□□□ 0.94
SDC2-202ENST00000518385 NLRP12P59046 1061 aa20.92■□□□□ 0.94
SDC2-202ENST00000518385 HDLBPQ00341 1268 aaKnown RBP20.92■□□□□ 0.94
SDC2-202ENST00000518385 DGKHQ86XP1 1220 aa20.92■□□□□ 0.94
SDC2-202ENST00000518385 NIM1KQ8IY84 436 aa20.92■□□□□ 0.94
SDC2-202ENST00000518385 GOLPH3LQ9H4A5 285 aa20.92■□□□□ 0.94
SDC2-202ENST00000518385 TCP11L1Q9NUJ3 509 aa20.92■□□□□ 0.94
SDC2-202ENST00000518385 PHLPP2Q6ZVD8 1323 aa20.92■□□□□ 0.94
SDC2-202ENST00000518385 ARFGEF1Q9Y6D6 1849 aa20.91■□□□□ 0.94
SDC2-202ENST00000518385 PPFIA3O75145 1194 aa20.91■□□□□ 0.94
SDC2-202ENST00000518385 VIL1P09327 827 aaKnown RBP20.91■□□□□ 0.94
SDC2-202ENST00000518385 XBP1P17861 261 aa20.91■□□□□ 0.94
SDC2-202ENST00000518385 RHBDL3P58872 404 aa20.91■□□□□ 0.94
SDC2-202ENST00000518385 OTUD7BQ6GQQ9 843 aa20.91■□□□□ 0.94
SDC2-202ENST00000518385 ZNF771Q7L3S4 317 aaPredicted RBP20.91■□□□□ 0.94
SDC2-202ENST00000518385 STK11IPQ8N1F8 1099 aa20.91■□□□□ 0.94
SDC2-202ENST00000518385 LINC00301Q8NCQ3 95 aa20.91■□□□□ 0.94
SDC2-202ENST00000518385 NUP133Q8WUM0 1156 aa20.91■□□□□ 0.94
SDC2-202ENST00000518385 SDF4Q9BRK5 362 aa20.91■□□□□ 0.94
SDC2-202ENST00000518385 PSME4Q14997 1843 aa20.9■□□□□ 0.94
SDC2-202ENST00000518385 SFPQP23246 707 aaKnown RBP eCLIP20.9■□□□□ 0.942e-6■■■□□ 14.6
SDC2-202ENST00000518385 SCNN1DP51172 638 aa20.9■□□□□ 0.94
SDC2-202ENST00000518385 AKAP17AQ02040 695 aaKnown RBP20.9■□□□□ 0.94
SDC2-202ENST00000518385 TROAPQ12815 778 aa20.9■□□□□ 0.94
SDC2-202ENST00000518385 GNL2Q13823 731 aaKnown RBP20.9■□□□□ 0.94
SDC2-202ENST00000518385 STK38Q15208 465 aa20.9■□□□□ 0.94
SDC2-202ENST00000518385 FILIP1Q7Z7B0 1213 aa20.9■□□□□ 0.94
SDC2-202ENST00000518385 ELOA2Q8IYF1 753 aaPredicted RBP20.9■□□□□ 0.94
SDC2-202ENST00000518385 AOPEPQ8N6M6 819 aa20.9■□□□□ 0.94
SDC2-202ENST00000518385 TEKT1Q969V4 418 aa20.9■□□□□ 0.94
SDC2-202ENST00000518385 ARGLU1Q9NWB6 273 aaPredicted RBP20.9■□□□□ 0.94
SDC2-202ENST00000518385 ZNF215Q9UL58 517 aaPredicted RBP20.9■□□□□ 0.94
SDC2-202ENST00000518385 GOLGA6L9A6NEM1 432 aa20.89■□□□□ 0.94
SDC2-202ENST00000518385 TSPY2A6NKD2 308 aa20.89■□□□□ 0.94
SDC2-202ENST00000518385 PRPF3O43395 683 aaKnown RBP20.89■□□□□ 0.94
SDC2-202ENST00000518385 USP17L8P0C7I0 530 aa20.89■□□□□ 0.94
SDC2-202ENST00000518385 ANO1Q5XXA6 986 aa20.89■□□□□ 0.94
SDC2-202ENST00000518385 RSBN1LQ6PCB5 846 aaPredicted RBP20.89■□□□□ 0.94
SDC2-202ENST00000518385 KIAA0825Q8IV33 1275 aa20.89■□□□□ 0.94
SDC2-202ENST00000518385 FOXP1Q9H334 677 aaPredicted RBP20.89■□□□□ 0.94
SDC2-202ENST00000518385 MYO3BQ8WXR4 1341 aa20.89■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 125.2 ms