RNA–Protein interactions for RNA: ENST00000518196.5

PABPC1-205, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 3

Gene PABPC1, Length 631 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-205ENST00000518196 C22orf23Q9BZE7 217 aa15.3■□□□□ 0.04
PABPC1-205ENST00000518196 TCP11L1Q9NUJ3 509 aa15.3■□□□□ 0.04
PABPC1-205ENST00000518196 PLIN4Q96Q06 1357 aa15.29■□□□□ 0.04
PABPC1-205ENST00000518196 SPDYE5A6NIY4 337 aa15.29■□□□□ 0.04
PABPC1-205ENST00000518196 GUCY1A2P33402 732 aa15.29■□□□□ 0.04
PABPC1-205ENST00000518196 JAG1P78504 1218 aa15.29■□□□□ 0.04
PABPC1-205ENST00000518196 SHROOM1Q2M3G4 852 aaPredicted RBP15.29■□□□□ 0.04
PABPC1-205ENST00000518196 CCDC102AQ96A19 550 aa15.29■□□□□ 0.04
PABPC1-205ENST00000518196 OPTNQ96CV9 577 aa15.29■□□□□ 0.04
PABPC1-205ENST00000518196 JAKMIP1Q96N16 626 aaKnown RBP15.29■□□□□ 0.04
PABPC1-205ENST00000518196 EMILIN3Q9NT22 766 aa15.29■□□□□ 0.04
PABPC1-205ENST00000518196 ZSWIM5Q9P217 1185 aa15.29■□□□□ 0.04
PABPC1-205ENST00000518196 ZHX2Q9Y6X8 837 aa15.29■□□□□ 0.04
PABPC1-205ENST00000518196 GREB1LQ9C091 1923 aaPredicted RBP15.28■□□□□ 0.04
PABPC1-205ENST00000518196 ERICH2A1L162 156 aa15.28■□□□□ 0.04
PABPC1-205ENST00000518196 HSPA6P17066 643 aa15.28■□□□□ 0.04
PABPC1-205ENST00000518196 MCM5P33992 734 aa15.28■□□□□ 0.04
PABPC1-205ENST00000518196 ATP2B2Q01814 1243 aa15.28■□□□□ 0.04
PABPC1-205ENST00000518196 ICA1Q05084 483 aa15.28■□□□□ 0.04
PABPC1-205ENST00000518196 PPIL2Q13356 520 aa15.28■□□□□ 0.04
PABPC1-205ENST00000518196 SART3Q15020 963 aaKnown RBP15.28■□□□□ 0.04
PABPC1-205ENST00000518196 ADCK5Q3MIX3 580 aa15.28■□□□□ 0.04
PABPC1-205ENST00000518196 MB21D2Q8IYB1 491 aaPredicted RBP15.28■□□□□ 0.04
PABPC1-205ENST00000518196 OTUD5Q96G74 571 aa15.28■□□□□ 0.04
PABPC1-205ENST00000518196 WNK4Q96J92 1243 aa15.28■□□□□ 0.04
PABPC1-205ENST00000518196 UBAC1Q9BSL1 405 aa15.28■□□□□ 0.04
PABPC1-205ENST00000518196 WDR18Q9BV38 432 aa15.28■□□□□ 0.04
PABPC1-205ENST00000518196 ARHGEF10LQ9HCE6 1279 aa15.28■□□□□ 0.04
PABPC1-205ENST00000518196 IGKV6D-41A0A0C4DH26 115 aa15.27■□□□□ 0.04
PABPC1-205ENST00000518196 RASSF10A6NK89 507 aa15.27■□□□□ 0.04
PABPC1-205ENST00000518196 TTLL1O95922 423 aa15.27■□□□□ 0.04
PABPC1-205ENST00000518196 ZBTB48P10074 688 aaPredicted RBP15.27■□□□□ 0.04
PABPC1-205ENST00000518196 ECE1P42892 770 aa15.27■□□□□ 0.04
PABPC1-205ENST00000518196 SPRYD7Q5W111 196 aa15.27■□□□□ 0.04
PABPC1-205ENST00000518196 BLOC1S2Q6QNY1 142 aa15.27■□□□□ 0.04
PABPC1-205ENST00000518196 CYB5R4Q7L1T6 521 aa15.27■□□□□ 0.04
PABPC1-205ENST00000518196 RASAL3Q86YV0 1011 aa15.27■□□□□ 0.04
PABPC1-205ENST00000518196 ZNF280CQ8ND82 737 aa15.27■□□□□ 0.04
PABPC1-205ENST00000518196 CEP95Q96GE4 821 aa15.27■□□□□ 0.04
PABPC1-205ENST00000518196 TTC14Q96N46 770 aa15.27■□□□□ 0.04
PABPC1-205ENST00000518196 MTA3Q9BTC8 594 aa15.27■□□□□ 0.04
PABPC1-205ENST00000518196 GNL3Q9BVP2 549 aaKnown RBP eCLIP15.27■□□□□ 0.04
PABPC1-205ENST00000518196 TM6SF1Q9BZW5 370 aa15.27■□□□□ 0.04
PABPC1-205ENST00000518196 SH2D4AQ9H788 454 aa15.27■□□□□ 0.04
PABPC1-205ENST00000518196 MTMR4Q9NYA4 1195 aa15.27■□□□□ 0.04
PABPC1-205ENST00000518196 NYAP2Q9P242 653 aa15.27■□□□□ 0.04
PABPC1-205ENST00000518196 FRMD4AQ9P2Q2 1039 aaPredicted RBP15.27■□□□□ 0.04
PABPC1-205ENST00000518196 MYH4Q9Y623 1939 aa15.27■□□□□ 0.03
PABPC1-205ENST00000518196 PHIPQ8WWQ0 1821 aa15.27■□□□□ 0.03
PABPC1-205ENST00000518196 DPYSL4O14531 572 aa15.26■□□□□ 0.03
PABPC1-205ENST00000518196 CXCL11O14625 94 aa15.26■□□□□ 0.03
PABPC1-205ENST00000518196 IFIT3O14879 490 aaKnown RBP15.26■□□□□ 0.03
PABPC1-205ENST00000518196 PRC1O43663 620 aa15.26■□□□□ 0.03
PABPC1-205ENST00000518196 SLC10A3P09131 477 aa15.26■□□□□ 0.03
PABPC1-205ENST00000518196 EEF2P13639 858 aaKnown RBP15.26■□□□□ 0.03
PABPC1-205ENST00000518196 CASTP20810 708 aaKnown RBP15.26■□□□□ 0.03
PABPC1-205ENST00000518196 RBM25P49756 843 aaKnown RBP15.26■□□□□ 0.03
PABPC1-205ENST00000518196 SPP2Q13103 211 aa15.26■□□□□ 0.03
PABPC1-205ENST00000518196 DHX32Q7L7V1 743 aaKnown RBP15.26■□□□□ 0.03
PABPC1-205ENST00000518196 CCDC84Q86UT8 332 aaPredicted RBP15.26■□□□□ 0.03
PABPC1-205ENST00000518196 ZSCAN10Q96SZ4 725 aaPredicted RBP15.26■□□□□ 0.03
PABPC1-205ENST00000518196 FEZ1Q99689 392 aa15.26■□□□□ 0.03
PABPC1-205ENST00000518196 ZKSCAN3Q9BRR0 538 aa15.26■□□□□ 0.03
PABPC1-205ENST00000518196 IL17RBQ9NRM6 502 aa15.26■□□□□ 0.03
PABPC1-205ENST00000518196 CLIP2Q9UDT6 1046 aa15.26■□□□□ 0.03
PABPC1-205ENST00000518196 STX8Q9UNK0 236 aa15.26■□□□□ 0.03
PABPC1-205ENST00000518196 AFG3L2Q9Y4W6 797 aa15.26■□□□□ 0.03
PABPC1-205ENST00000518196 WDR19Q8NEZ3 1342 aa15.25■□□□□ 0.03
PABPC1-205ENST00000518196 TRIM75PA6NK02 468 aa15.25■□□□□ 0.03
PABPC1-205ENST00000518196 C19orf81C9J6K1 198 aa15.25■□□□□ 0.03
PABPC1-205ENST00000518196 USP17L10C9JJH3 530 aa15.25■□□□□ 0.03
PABPC1-205ENST00000518196 IRF6O14896 467 aa15.25■□□□□ 0.03
PABPC1-205ENST00000518196 NMT2O60551 498 aa15.25■□□□□ 0.03
PABPC1-205ENST00000518196 USP14P54578 494 aa15.25■□□□□ 0.03
PABPC1-205ENST00000518196 SNAPC2Q13487 334 aa15.25■□□□□ 0.03
PABPC1-205ENST00000518196 CHST3Q7LGC8 479 aa15.25■□□□□ 0.03
PABPC1-205ENST00000518196 DGKHQ86XP1 1220 aa15.25■□□□□ 0.03
PABPC1-205ENST00000518196 CLEC10AQ8IUN9 316 aa15.25■□□□□ 0.03
PABPC1-205ENST00000518196 NKX2-3Q8TAU0 364 aa15.25■□□□□ 0.03
PABPC1-205ENST00000518196 MKL1Q969V6 931 aa15.25■□□□□ 0.03
PABPC1-205ENST00000518196 TMEM87BQ96K49 555 aa15.25■□□□□ 0.03
PABPC1-205ENST00000518196 CYP46A1Q9Y6A2 500 aa15.25■□□□□ 0.03
PABPC1-205ENST00000518196 TNKSO95271 1327 aa15.24■□□□□ 0.03
PABPC1-205ENST00000518196 GJA5P36382 358 aa15.24■□□□□ 0.03
PABPC1-205ENST00000518196 GTF2A2P52657 109 aa15.24■□□□□ 0.03
PABPC1-205ENST00000518196 BACE1P56817 501 aa15.24■□□□□ 0.03
PABPC1-205ENST00000518196 ANTXR2P58335 489 aa15.24■□□□□ 0.03
PABPC1-205ENST00000518196 FGD1P98174 961 aa15.24■□□□□ 0.03
PABPC1-205ENST00000518196 EXOSC10Q01780 885 aaKnown RBP15.24■□□□□ 0.03
PABPC1-205ENST00000518196 GRM1Q13255 1194 aa15.24■□□□□ 0.03
PABPC1-205ENST00000518196 WTAPQ15007 396 aa15.24■□□□□ 0.03
PABPC1-205ENST00000518196 TMEM67Q5HYA8 995 aa15.24■□□□□ 0.03
PABPC1-205ENST00000518196 IFIT1BQ5T764 474 aaKnown RBP15.24■□□□□ 0.03
PABPC1-205ENST00000518196 CYP4F22Q6NT55 531 aa15.24■□□□□ 0.03
PABPC1-205ENST00000518196 USP17L2Q6R6M4 530 aa15.24■□□□□ 0.03
PABPC1-205ENST00000518196 RUFY3Q7L099 469 aa15.24■□□□□ 0.03
PABPC1-205ENST00000518196 TMTC2Q8N394 836 aa15.24■□□□□ 0.03
PABPC1-205ENST00000518196 ACER1Q8TDN7 264 aa15.24■□□□□ 0.03
PABPC1-205ENST00000518196 IL17RAQ96F46 866 aa15.24■□□□□ 0.03
PABPC1-205ENST00000518196 CAPNS2Q96L46 248 aa15.24■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 448 ms