RNA–Protein interactions for RNA: ENST00000517239.1

RNU4-60P-201, Transcript of RNA, U4 small nuclear 60, pseudogene, humanhuman

BASIC

Gene RNU4-60P, Length 135 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-60P-201ENST00000517239 A0A1W2PPZ6 126 aa4.81□□□□□ -1.64
RNU4-60P-201ENST00000517239 hCG_1984214I3L0E3 225 aa4.81□□□□□ -1.64
RNU4-60P-201ENST00000517239 M0R2C6 588 aa4.81□□□□□ -1.64
RNU4-60P-201ENST00000517239 ERC2O15083 957 aa4.81□□□□□ -1.64
RNU4-60P-201ENST00000517239 MAP3K6O95382 1288 aa4.81□□□□□ -1.64
RNU4-60P-201ENST00000517239 APBA3O96018 575 aa4.81□□□□□ -1.64
RNU4-60P-201ENST00000517239 ADH1CP00326 375 aa4.81□□□□□ -1.64
RNU4-60P-201ENST00000517239 EGFRP00533 1210 aa4.81□□□□□ -1.64
RNU4-60P-201ENST00000517239 LTFP02788 710 aa4.81□□□□□ -1.64
RNU4-60P-201ENST00000517239 ASLP04424 464 aa4.81□□□□□ -1.64
RNU4-60P-201ENST00000517239 PTMAP06454 111 aaKnown RBP4.81□□□□□ -1.64
RNU4-60P-201ENST00000517239 NR3C2P08235 984 aa4.81□□□□□ -1.64
RNU4-60P-201ENST00000517239 POTEJP0CG39 1038 aa4.81□□□□□ -1.64
RNU4-60P-201ENST00000517239 ACRP10323 421 aa4.81□□□□□ -1.64
RNU4-60P-201ENST00000517239 ITPKAP23677 461 aa4.81□□□□□ -1.64
RNU4-60P-201ENST00000517239 DDIT3P35638 169 aa4.81□□□□□ -1.64
RNU4-60P-201ENST00000517239 FLT3P36888 993 aa4.81□□□□□ -1.64
RNU4-60P-201ENST00000517239 GJA9P57773 515 aa4.81□□□□□ -1.64
RNU4-60P-201ENST00000517239 SUMO1P63165 101 aaKnown RBP4.81□□□□□ -1.64
RNU4-60P-201ENST00000517239 RPL6Q02878 288 aaKnown RBP4.81□□□□□ -1.64
RNU4-60P-201ENST00000517239 PPP2R3AQ06190 1150 aa4.81□□□□□ -1.64
RNU4-60P-201ENST00000517239 TRIM14Q14142 442 aa4.81□□□□□ -1.64
RNU4-60P-201ENST00000517239 KRT72Q14CN4 511 aa4.81□□□□□ -1.64
RNU4-60P-201ENST00000517239 LRRC14Q15048 493 aa4.81□□□□□ -1.64
RNU4-60P-201ENST00000517239 PLA2G4EQ3MJ16 856 aa4.81□□□□□ -1.64
RNU4-60P-201ENST00000517239 ARSJQ5FYB0 599 aaPredicted RBP4.81□□□□□ -1.64
RNU4-60P-201ENST00000517239 SLC27A3Q5K4L6 730 aa4.81□□□□□ -1.64
RNU4-60P-201ENST00000517239 HEATR6Q6AI08 1181 aaKnown RBP4.81□□□□□ -1.64
RNU4-60P-201ENST00000517239 MZT2AQ6P582 158 aa4.81□□□□□ -1.64
RNU4-60P-201ENST00000517239 CFAP161Q6P656 301 aa4.81□□□□□ -1.64
RNU4-60P-201ENST00000517239 NSMFQ6X4W1 530 aa4.81□□□□□ -1.64
RNU4-60P-201ENST00000517239 UBE2R2Q712K3 238 aaPredicted RBP4.81□□□□□ -1.64
RNU4-60P-201ENST00000517239 KRT25Q7Z3Z0 450 aa4.81□□□□□ -1.64
RNU4-60P-201ENST00000517239 FGD2Q7Z6J4 655 aa4.81□□□□□ -1.64
RNU4-60P-201ENST00000517239 PNMA8AQ86V59 439 aaPredicted RBP4.81□□□□□ -1.64
RNU4-60P-201ENST00000517239 GRIN3AQ8TCU5 1115 aa4.81□□□□□ -1.64
RNU4-60P-201ENST00000517239 ASAP3Q8TDY4 903 aa4.81□□□□□ -1.64
RNU4-60P-201ENST00000517239 SNRNP27Q8WVK2 155 aaKnown RBP4.81□□□□□ -1.64
RNU4-60P-201ENST00000517239 KLHL6Q8WZ60 621 aa4.81□□□□□ -1.64
RNU4-60P-201ENST00000517239 PPP1R14AQ96A00 147 aa4.81□□□□□ -1.64
RNU4-60P-201ENST00000517239 CNTNAP3BQ96NU0 1288 aa4.81□□□□□ -1.64
RNU4-60P-201ENST00000517239 PNMA5Q96PV4 448 aa4.81□□□□□ -1.64
RNU4-60P-201ENST00000517239 MTRQ99707 1265 aa4.81□□□□□ -1.64
RNU4-60P-201ENST00000517239 EIF2AK1Q9BQI3 630 aaKnown RBP4.81□□□□□ -1.64
RNU4-60P-201ENST00000517239 NAA15Q9BXJ9 866 aaKnown RBP4.81□□□□□ -1.64
RNU4-60P-201ENST00000517239 CNTNAP3Q9BZ76 1288 aa4.81□□□□□ -1.64
RNU4-60P-201ENST00000517239 LRRC27Q9C0I9 530 aa4.81□□□□□ -1.64
RNU4-60P-201ENST00000517239 ZNF395Q9H8N7 513 aaPredicted RBP4.81□□□□□ -1.64
RNU4-60P-201ENST00000517239 TRIM39Q9HCM9 518 aa4.81□□□□□ -1.64
RNU4-60P-201ENST00000517239 TCF7L1Q9HCS4 588 aa4.81□□□□□ -1.64
RNU4-60P-201ENST00000517239 DDX21Q9NR30 783 aaKnown RBP eCLIP4.81□□□□□ -1.64
RNU4-60P-201ENST00000517239 LRRC4BQ9NT99 713 aa4.81□□□□□ -1.64
RNU4-60P-201ENST00000517239 ZDHHC3Q9NYG2 299 aa4.81□□□□□ -1.64
RNU4-60P-201ENST00000517239 FRMD4BQ9Y2L6 1034 aa4.81□□□□□ -1.64
RNU4-60P-201ENST00000517239 GPC6Q9Y625 555 aaPredicted RBP4.81□□□□□ -1.64
RNU4-60P-201ENST00000517239 A0A087WZG4 1122 aa4.8□□□□□ -1.64
RNU4-60P-201ENST00000517239 PPEF1O14829 653 aaPredicted RBP4.8□□□□□ -1.64
RNU4-60P-201ENST00000517239 SNX2O60749 519 aa4.8□□□□□ -1.64
RNU4-60P-201ENST00000517239 MMP20O60882 483 aa4.8□□□□□ -1.64
RNU4-60P-201ENST00000517239 RHOBTB3O94955 611 aa4.8□□□□□ -1.64
RNU4-60P-201ENST00000517239 IL33O95760 270 aa4.8□□□□□ -1.64
RNU4-60P-201ENST00000517239 RBP3P10745 1247 aa4.8□□□□□ -1.64
RNU4-60P-201ENST00000517239 PABPC1P11940 636 aaKnown RBP4.8□□□□□ -1.64
RNU4-60P-201ENST00000517239 BPIP17213 487 aa4.8□□□□□ -1.64
RNU4-60P-201ENST00000517239 NME2P22392 152 aa4.8□□□□□ -1.64
RNU4-60P-201ENST00000517239 TARSP26639 723 aaKnown RBP4.8□□□□□ -1.64
RNU4-60P-201ENST00000517239 IARSP41252 1262 aaKnown RBP4.8□□□□□ -1.64
RNU4-60P-201ENST00000517239 ECE1P42892 770 aa4.8□□□□□ -1.64
RNU4-60P-201ENST00000517239 RECQLP46063 649 aaPredicted RBP4.8□□□□□ -1.64
RNU4-60P-201ENST00000517239 CCT5P48643 541 aa4.8□□□□□ -1.64
RNU4-60P-201ENST00000517239 RELBQ01201 579 aa4.8□□□□□ -1.64
RNU4-60P-201ENST00000517239 PTPN11Q06124 597 aaPredicted RBP4.8□□□□□ -1.64
RNU4-60P-201ENST00000517239 PDE1CQ14123 709 aaPredicted RBP4.8□□□□□ -1.64
RNU4-60P-201ENST00000517239 SART3Q15020 963 aaKnown RBP4.8□□□□□ -1.64
RNU4-60P-201ENST00000517239 ELF2Q15723 593 aa4.8□□□□□ -1.64
RNU4-60P-201ENST00000517239 SKOR2Q2VWA4 1001 aaPredicted RBP4.8□□□□□ -1.64
RNU4-60P-201ENST00000517239 ALDH1L2Q3SY69 923 aa4.8□□□□□ -1.64
RNU4-60P-201ENST00000517239 ATP13A4Q4VNC1 1196 aa4.8□□□□□ -1.64
RNU4-60P-201ENST00000517239 RPS26P11Q5JNZ5 115 aaPredicted RBP4.8□□□□□ -1.64
RNU4-60P-201ENST00000517239 RC3H1Q5TC82 1133 aaKnown RBP4.8□□□□□ -1.64
RNU4-60P-201ENST00000517239 CDCA2Q69YH5 1023 aaPredicted RBP4.8□□□□□ -1.64
RNU4-60P-201ENST00000517239 LLGL2Q6P1M3 1020 aa4.8□□□□□ -1.64
RNU4-60P-201ENST00000517239 BRAPQ7Z569 592 aa4.8□□□□□ -1.64
RNU4-60P-201ENST00000517239 CBARPQ8N350 705 aaPredicted RBP4.8□□□□□ -1.64
RNU4-60P-201ENST00000517239 TAB3Q8N5C8 712 aaPredicted RBP4.8□□□□□ -1.64
RNU4-60P-201ENST00000517239 OR13H1Q8NG92 308 aa4.8□□□□□ -1.64
RNU4-60P-201ENST00000517239 MENTQ9BUN1 341 aa4.8□□□□□ -1.64
RNU4-60P-201ENST00000517239 GSX2Q9BZM3 304 aa4.8□□□□□ -1.64
RNU4-60P-201ENST00000517239 EFCC1Q9HA90 598 aa4.8□□□□□ -1.64
RNU4-60P-201ENST00000517239 SAGE1Q9NXZ1 904 aa4.8□□□□□ -1.64
RNU4-60P-201ENST00000517239 NOL12Q9UGY1 213 aaKnown RBP eCLIP4.8□□□□□ -1.64
RNU4-60P-201ENST00000517239 APOBEC2Q9Y235 224 aaKnown RBP4.8□□□□□ -1.64
RNU4-60P-201ENST00000517239 MEIS3P2A8K0S8 358 aa4.79□□□□□ -1.64
RNU4-60P-201ENST00000517239 CTNND1O60716 968 aaKnown RBP4.79□□□□□ -1.64
RNU4-60P-201ENST00000517239 HTR3BO95264 441 aa4.79□□□□□ -1.64
RNU4-60P-201ENST00000517239 ASGR2P07307 311 aa4.79□□□□□ -1.64
RNU4-60P-201ENST00000517239 NME1P15531 152 aaKnown RBP4.79□□□□□ -1.64
RNU4-60P-201ENST00000517239 MAPK9P45984 424 aa4.79□□□□□ -1.64
RNU4-60P-201ENST00000517239 IREB2P48200 963 aaKnown RBP4.79□□□□□ -1.64
RNU4-60P-201ENST00000517239 PPP2R2AP63151 447 aa4.79□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms