RNA–Protein interactions for RNA: ENST00000515355.5

SUB1-213, Transcript of SUB1 homolog, transcriptional regulator, humanhuman

APPRIS P1 TSL 3 BASIC

Gene SUB1, Length 771 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUB1-213ENST00000515355 VCAM1P19320 739 aa13.67□□□□□ -0.22
SUB1-213ENST00000515355 CHMLP26374 656 aa13.67□□□□□ -0.22
SUB1-213ENST00000515355 CAP1Q01518 475 aa13.67□□□□□ -0.22
SUB1-213ENST00000515355 USP17L24Q0WX57 530 aa13.67□□□□□ -0.22
SUB1-213ENST00000515355 ALX1Q15699 326 aa13.67□□□□□ -0.22
SUB1-213ENST00000515355 PKN2Q16513 984 aaKnown RBP13.67□□□□□ -0.22
SUB1-213ENST00000515355 CWC22Q9HCG8 908 aaKnown RBP13.67□□□□□ -0.22
SUB1-213ENST00000515355 MTMR7Q9Y216 660 aa13.67□□□□□ -0.22
SUB1-213ENST00000515355 DDX60LQ5H9U9 1706 aaKnown RBP13.67□□□□□ -0.22
SUB1-213ENST00000515355 MYCP01106 439 aaPredicted RBP13.66□□□□□ -0.22
SUB1-213ENST00000515355 BCRP11274 1271 aa13.66□□□□□ -0.22
SUB1-213ENST00000515355 GCLCP48506 637 aaPredicted RBP13.66□□□□□ -0.22
SUB1-213ENST00000515355 HERVK_113P62684 666 aa13.66□□□□□ -0.22
SUB1-213ENST00000515355 KIAA1755Q5JYT7 1200 aa13.66□□□□□ -0.22
SUB1-213ENST00000515355 SIAH1Q8IUQ4 282 aa13.66□□□□□ -0.22
SUB1-213ENST00000515355 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.66□□□□□ -0.22
SUB1-213ENST00000515355 GOPCQ9HD26 462 aa13.66□□□□□ -0.22
SUB1-213ENST00000515355 ADGRA2Q96PE1 1338 aa13.65□□□□□ -0.22
SUB1-213ENST00000515355 PHIPQ8WWQ0 1821 aa13.65□□□□□ -0.22
SUB1-213ENST00000515355 HAX1O00165 279 aa13.65□□□□□ -0.22
SUB1-213ENST00000515355 TNPO2O14787 897 aaKnown RBP13.65□□□□□ -0.22
SUB1-213ENST00000515355 HOXA7P31268 230 aaPredicted RBP13.65□□□□□ -0.22
SUB1-213ENST00000515355 FCGRTP55899 365 aa13.65□□□□□ -0.22
SUB1-213ENST00000515355 IFFO2Q5TF58 517 aa13.65□□□□□ -0.22
SUB1-213ENST00000515355 WDR78Q5VTH9 848 aa13.65□□□□□ -0.22
SUB1-213ENST00000515355 FBXO46Q6PJ61 603 aaPredicted RBP13.65□□□□□ -0.22
SUB1-213ENST00000515355 CATSPERGQ6ZRH7 1159 aa13.65□□□□□ -0.22
SUB1-213ENST00000515355 MFSD6Q6ZSS7 791 aa13.65□□□□□ -0.22
SUB1-213ENST00000515355 CEP95Q96GE4 821 aa13.65□□□□□ -0.22
SUB1-213ENST00000515355 TRIM47Q96LD4 638 aa13.65□□□□□ -0.22
SUB1-213ENST00000515355 C12orf42Q96LP6 360 aa13.65□□□□□ -0.22
SUB1-213ENST00000515355 IL25Q9H293 177 aa13.65□□□□□ -0.22
SUB1-213ENST00000515355 VCPKMTQ9H867 229 aa13.65□□□□□ -0.22
SUB1-213ENST00000515355 PPP4R2Q9NY27 417 aa13.65□□□□□ -0.22
SUB1-213ENST00000515355 STX8Q9UNK0 236 aa13.65□□□□□ -0.22
SUB1-213ENST00000515355 HPS5Q9UPZ3 1129 aa13.65□□□□□ -0.22
SUB1-213ENST00000515355 TMX2Q9Y320 296 aa13.65□□□□□ -0.22
SUB1-213ENST00000515355 ROBO3Q96MS0 1386 aa13.65□□□□□ -0.22
SUB1-213ENST00000515355 NMT2O60551 498 aa13.64□□□□□ -0.23
SUB1-213ENST00000515355 FLOT1O75955 427 aa13.64□□□□□ -0.23
SUB1-213ENST00000515355 HOXD10P28358 340 aa13.64□□□□□ -0.23
SUB1-213ENST00000515355 CTGFP29279 349 aa13.64□□□□□ -0.23
SUB1-213ENST00000515355 IMMTQ16891 758 aaKnown RBP13.64□□□□□ -0.23
SUB1-213ENST00000515355 KIAA1211Q6ZU35 1233 aa13.64□□□□□ -0.23
SUB1-213ENST00000515355 LRRC47Q8N1G4 583 aaKnown RBP13.64□□□□□ -0.23
SUB1-213ENST00000515355 GPRC5AQ8NFJ5 357 aa13.64□□□□□ -0.23
SUB1-213ENST00000515355 NEDD1Q8NHV4 660 aa13.64□□□□□ -0.23
SUB1-213ENST00000515355 NUP88Q99567 741 aaPredicted RBP13.64□□□□□ -0.23
SUB1-213ENST00000515355 CTNNA3Q9UI47 895 aa13.64□□□□□ -0.23
SUB1-213ENST00000515355 ANAPC4Q9UJX5 808 aa13.64□□□□□ -0.23
SUB1-213ENST00000515355 PTPN22Q9Y2R2 807 aa13.64□□□□□ -0.23
SUB1-213ENST00000515355 TACC3Q9Y6A5 838 aa13.64□□□□□ -0.23
SUB1-213ENST00000515355 F5H6K3 240 aa13.63□□□□□ -0.23
SUB1-213ENST00000515355 TTLL1O95922 423 aa13.63□□□□□ -0.23
SUB1-213ENST00000515355 KLRC3Q07444 240 aa13.63□□□□□ -0.23
SUB1-213ENST00000515355 PLS1Q14651 629 aa13.63□□□□□ -0.23
SUB1-213ENST00000515355 COG2Q14746 738 aa13.63□□□□□ -0.23
SUB1-213ENST00000515355 FAM110CQ1W6H9 321 aa13.63□□□□□ -0.23
SUB1-213ENST00000515355 FAM83BQ5T0W9 1011 aa13.63□□□□□ -0.23
SUB1-213ENST00000515355 AKNAD1Q5T1N1 836 aa13.63□□□□□ -0.23
SUB1-213ENST00000515355 RAET1EQ8TD07 263 aa13.63□□□□□ -0.23
SUB1-213ENST00000515355 LPAR1Q92633 364 aa13.63□□□□□ -0.23
SUB1-213ENST00000515355 COA7Q96BR5 231 aa13.63□□□□□ -0.23
SUB1-213ENST00000515355 DSCC1Q9BVC3 393 aa13.63□□□□□ -0.23
SUB1-213ENST00000515355 MTMR4Q9NYA4 1195 aa13.63□□□□□ -0.23
SUB1-213ENST00000515355 NYAP2Q9P242 653 aa13.63□□□□□ -0.23
SUB1-213ENST00000515355 BIN2Q9UBW5 565 aaPredicted RBP13.63□□□□□ -0.23
SUB1-213ENST00000515355 PTCH2Q9Y6C5 1203 aa13.63□□□□□ -0.23
SUB1-213ENST00000515355 MYPNQ86TC9 1320 aa13.63□□□□□ -0.23
SUB1-213ENST00000515355 WDR46O15213 610 aaKnown RBP13.62□□□□□ -0.23
SUB1-213ENST00000515355 SLC4A3P48751 1232 aa13.62□□□□□ -0.23
SUB1-213ENST00000515355 PTH1RQ03431 593 aa13.62□□□□□ -0.23
SUB1-213ENST00000515355 Q3C1V9 767 aa13.62□□□□□ -0.23
SUB1-213ENST00000515355 SLC9C1Q4G0N8 1177 aa13.62□□□□□ -0.23
SUB1-213ENST00000515355 TBC1D10CQ8IV04 446 aa13.62□□□□□ -0.23
SUB1-213ENST00000515355 ZKSCAN3Q9BRR0 538 aa13.62□□□□□ -0.23
SUB1-213ENST00000515355 RNF41Q9H4P4 317 aaPredicted RBP13.62□□□□□ -0.23
SUB1-213ENST00000515355 TXNRD2Q9NNW7 524 aa13.62□□□□□ -0.23
SUB1-213ENST00000515355 HOXC10Q9NYD6 342 aa13.62□□□□□ -0.23
SUB1-213ENST00000515355 RBPJLQ9UBG7 517 aa13.62□□□□□ -0.23
SUB1-213ENST00000515355 GABRQQ9UN88 632 aa13.62□□□□□ -0.23
SUB1-213ENST00000515355 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.62□□□□□ -0.23
SUB1-213ENST00000515355 RAD50Q92878 1312 aa13.62□□□□□ -0.23
SUB1-213ENST00000515355 IGKV6D-41A0A0C4DH26 115 aa13.61□□□□□ -0.23
SUB1-213ENST00000515355 SGSM2O43147 1006 aa13.61□□□□□ -0.23
SUB1-213ENST00000515355 ORC4O43929 436 aa13.61□□□□□ -0.23
SUB1-213ENST00000515355 NDUFB10O96000 172 aa13.61□□□□□ -0.23
SUB1-213ENST00000515355 ERVK-9P63128 1117 aa13.61□□□□□ -0.23
SUB1-213ENST00000515355 ERVK-24P63145 666 aa13.61□□□□□ -0.23
SUB1-213ENST00000515355 PRKCZQ05513 592 aa13.61□□□□□ -0.23
SUB1-213ENST00000515355 IKQ13123 557 aaPredicted RBP13.61□□□□□ -0.23
SUB1-213ENST00000515355 CASC1Q6TDU7 716 aa13.61□□□□□ -0.23
SUB1-213ENST00000515355 GTF3C2Q8WUA4 911 aaPredicted RBP13.61□□□□□ -0.23
SUB1-213ENST00000515355 FBXO28Q9NVF7 368 aa13.61□□□□□ -0.23
SUB1-213ENST00000515355 SRRDQ9UH36 339 aa13.61□□□□□ -0.23
SUB1-213ENST00000515355 CTDP1Q9Y5B0 961 aaPredicted RBP13.61□□□□□ -0.23
SUB1-213ENST00000515355 ZMYM6O95789 1325 aa13.61□□□□□ -0.23
SUB1-213ENST00000515355 NEDD4P46934 1319 aa13.61□□□□□ -0.23
SUB1-213ENST00000515355 LAMB1P07942 1786 aa13.6□□□□□ -0.23
SUB1-213ENST00000515355 PTPRFP10586 1907 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms