RNA–Protein interactions for RNA: ENST00000513819.1

NIPBL-207, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 3

Gene NIPBL, Length 452 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-207ENST00000513819 ZNF662Q6ZS27 426 aa6.42□□□□□ -1.38
NIPBL-207ENST00000513819 HAUS7Q99871 368 aa6.42□□□□□ -1.38
NIPBL-207ENST00000513819 SSBP4Q9BWG4 385 aaPredicted RBP6.42□□□□□ -1.38
NIPBL-207ENST00000513819 MKRN2Q9H000 416 aaKnown RBP6.42□□□□□ -1.38
NIPBL-207ENST00000513819 SUSD2Q9UGT4 822 aa6.42□□□□□ -1.38
NIPBL-207ENST00000513819 CNTNAP4Q9C0A0 1308 aa6.42□□□□□ -1.38
NIPBL-207ENST00000513819 CBFA2T2O43439 604 aa6.41□□□□□ -1.38
NIPBL-207ENST00000513819 EOMESO95936 686 aa6.41□□□□□ -1.38
NIPBL-207ENST00000513819 SV2CQ496J9 727 aa6.41□□□□□ -1.38
NIPBL-207ENST00000513819 HEATR6Q6AI08 1181 aaKnown RBP6.41□□□□□ -1.38
NIPBL-207ENST00000513819 SMARCC1Q92922 1105 aaPredicted RBP6.41□□□□□ -1.38
NIPBL-207ENST00000513819 VWCEQ96DN2 955 aa6.41□□□□□ -1.38
NIPBL-207ENST00000513819 FGD4Q96M96 766 aa6.41□□□□□ -1.38
NIPBL-207ENST00000513819 DUSP23Q9BVJ7 150 aa6.41□□□□□ -1.38
NIPBL-207ENST00000513819 TPX2Q9ULW0 747 aaKnown RBP6.41□□□□□ -1.38
NIPBL-207ENST00000513819 ESYT3A0FGR9 886 aa6.4□□□□□ -1.38
NIPBL-207ENST00000513819 HMX2A2RU54 273 aa6.4□□□□□ -1.38
NIPBL-207ENST00000513819 RNF225M0QZC1 329 aaPredicted RBP6.4□□□□□ -1.38
NIPBL-207ENST00000513819 FAM87AP0C7U9 286 aa6.4□□□□□ -1.38
NIPBL-207ENST00000513819 CANXP27824 592 aaKnown RBP6.4□□□□□ -1.38
NIPBL-207ENST00000513819 ETV3P41162 512 aa6.4□□□□□ -1.38
NIPBL-207ENST00000513819 EGFLAMQ63HQ2 1017 aa6.4□□□□□ -1.38
NIPBL-207ENST00000513819 CLEC10AQ8IUN9 316 aa6.4□□□□□ -1.38
NIPBL-207ENST00000513819 PPP1R14AQ96A00 147 aa6.4□□□□□ -1.38
NIPBL-207ENST00000513819 TP53INP1Q96A56 240 aa6.4□□□□□ -1.38
NIPBL-207ENST00000513819 FAM83CQ9BQN1 747 aa6.4□□□□□ -1.38
NIPBL-207ENST00000513819 LGR4Q9BXB1 951 aa6.4□□□□□ -1.38
NIPBL-207ENST00000513819 KLHL25Q9H0H3 589 aa6.4□□□□□ -1.38
NIPBL-207ENST00000513819 FANCLQ9NW38 375 aa6.4□□□□□ -1.38
NIPBL-207ENST00000513819 APEX2Q9UBZ4 518 aa6.4□□□□□ -1.38
NIPBL-207ENST00000513819 LEMD3Q9Y2U8 911 aa6.4□□□□□ -1.38
NIPBL-207ENST00000513819 ANKRD34BA5PLL1 514 aa6.39□□□□□ -1.39
NIPBL-207ENST00000513819 ENPP3O14638 875 aa6.39□□□□□ -1.39
NIPBL-207ENST00000513819 SHOXO15266 292 aa6.39□□□□□ -1.39
NIPBL-207ENST00000513819 LRRN2O75325 713 aa6.39□□□□□ -1.39
NIPBL-207ENST00000513819 ADMP35318 185 aa6.39□□□□□ -1.39
NIPBL-207ENST00000513819 RNF4P78317 190 aa6.39□□□□□ -1.39
NIPBL-207ENST00000513819 SQSTM1Q13501 440 aa6.39□□□□□ -1.39
NIPBL-207ENST00000513819 C2orf27AQ580R0 203 aa6.39□□□□□ -1.39
NIPBL-207ENST00000513819 C7orf61Q8IZ16 206 aa6.39□□□□□ -1.39
NIPBL-207ENST00000513819 SHISA5Q8N114 240 aa6.39□□□□□ -1.39
NIPBL-207ENST00000513819 RNF141Q8WVD5 230 aa6.39□□□□□ -1.39
NIPBL-207ENST00000513819 TBC1D32Q96NH3 1257 aa6.39□□□□□ -1.39
NIPBL-207ENST00000513819 APBA2Q99767 749 aa6.39□□□□□ -1.39
NIPBL-207ENST00000513819 SPATA9Q9BWV2 254 aa6.39□□□□□ -1.39
NIPBL-207ENST00000513819 EPN3Q9H201 632 aa6.39□□□□□ -1.39
NIPBL-207ENST00000513819 ZNF451Q9Y4E5 1061 aa6.39□□□□□ -1.39
NIPBL-207ENST00000513819 FAM153BP0C7A2 387 aa6.38□□□□□ -1.39
NIPBL-207ENST00000513819 NAT2P11245 290 aa6.38□□□□□ -1.39
NIPBL-207ENST00000513819 HSD3B2P26439 372 aa6.38□□□□□ -1.39
NIPBL-207ENST00000513819 GATA4P43694 442 aa6.38□□□□□ -1.39
NIPBL-207ENST00000513819 SNW1Q13573 536 aaKnown RBP6.38□□□□□ -1.39
NIPBL-207ENST00000513819 AUHQ13825 339 aaKnown RBP6.38□□□□□ -1.39
NIPBL-207ENST00000513819 ADAT2Q7Z6V5 191 aaKnown RBP6.38□□□□□ -1.39
NIPBL-207ENST00000513819 GIMAP7Q8NHV1 300 aa6.38□□□□□ -1.39
NIPBL-207ENST00000513819 THAP3Q8WTV1 239 aaPredicted RBP6.38□□□□□ -1.39
NIPBL-207ENST00000513819 GATA6Q92908 595 aa6.38□□□□□ -1.39
NIPBL-207ENST00000513819 ZNF669Q96BR6 464 aaPredicted RBP6.38□□□□□ -1.39
NIPBL-207ENST00000513819 ASPNQ9BXN1 380 aa6.38□□□□□ -1.39
NIPBL-207ENST00000513819 C7orf69Q9H7B7 122 aa6.38□□□□□ -1.39
NIPBL-207ENST00000513819 LRP2BPQ9P2M1 347 aa6.38□□□□□ -1.39
NIPBL-207ENST00000513819 STOML1Q9UBI4 398 aa6.38□□□□□ -1.39
NIPBL-207ENST00000513819 FBXL21Q9UKT6 434 aa6.38□□□□□ -1.39
NIPBL-207ENST00000513819 WDR3Q9UNX4 943 aaKnown RBP eCLIP6.38□□□□□ -1.39
NIPBL-207ENST00000513819 RAXQ9Y2V3 346 aa6.38□□□□□ -1.39
NIPBL-207ENST00000513819 PTCH2Q9Y6C5 1203 aa6.38□□□□□ -1.39
NIPBL-207ENST00000513819 SBNO2Q9Y2G9 1366 aa6.38□□□□□ -1.39
NIPBL-207ENST00000513819 CDC45O75419 566 aa6.37□□□□□ -1.39
NIPBL-207ENST00000513819 CBX7O95931 251 aa6.37□□□□□ -1.39
NIPBL-207ENST00000513819 CD247P20963 164 aa6.37□□□□□ -1.39
NIPBL-207ENST00000513819 ZNF143P52747 638 aaPredicted RBP6.37□□□□□ -1.39
NIPBL-207ENST00000513819 NBPF9Q3BBW0 867 aa6.37□□□□□ -1.39
NIPBL-207ENST00000513819 ANKRD39Q53RE8 183 aa6.37□□□□□ -1.39
NIPBL-207ENST00000513819 FAM214BQ7L5A3 538 aa6.37□□□□□ -1.39
NIPBL-207ENST00000513819 ZAR1Q86SH2 424 aa6.37□□□□□ -1.39
NIPBL-207ENST00000513819 LRRC47Q8N1G4 583 aaKnown RBP6.37□□□□□ -1.39
NIPBL-207ENST00000513819 FBXL6Q8N531 539 aa6.37□□□□□ -1.39
NIPBL-207ENST00000513819 ZNF513Q8N8E2 541 aaPredicted RBP6.37□□□□□ -1.39
NIPBL-207ENST00000513819 JMYQ8N9B5 988 aa6.37□□□□□ -1.39
NIPBL-207ENST00000513819 LRRN4CLQ8ND94 238 aa6.37□□□□□ -1.39
NIPBL-207ENST00000513819 ADCY4Q8NFM4 1077 aa6.37□□□□□ -1.39
NIPBL-207ENST00000513819 APPBP2Q92624 585 aa6.37□□□□□ -1.39
NIPBL-207ENST00000513819 FBXL18Q96ME1 805 aa6.37□□□□□ -1.39
NIPBL-207ENST00000513819 PRDM14Q9GZV8 571 aa6.37□□□□□ -1.39
NIPBL-207ENST00000513819 GBP3Q9H0R5 595 aa6.37□□□□□ -1.39
NIPBL-207ENST00000513819 GP6Q9HCN6 339 aa6.37□□□□□ -1.39
NIPBL-207ENST00000513819 PRDM5Q9NQX1 630 aaPredicted RBP6.37□□□□□ -1.39
NIPBL-207ENST00000513819 TMEM260Q9NX78 707 aa6.37□□□□□ -1.39
NIPBL-207ENST00000513819 SUGT1Q9Y2Z0 365 aa6.37□□□□□ -1.39
NIPBL-207ENST00000513819 A0A1W2PQU0 124 aa6.36□□□□□ -1.39
NIPBL-207ENST00000513819 ANKRD62A6NC57 917 aa6.36□□□□□ -1.39
NIPBL-207ENST00000513819 IQCA1LA6NCM1 817 aa6.36□□□□□ -1.39
NIPBL-207ENST00000513819 FAM170BA6NMN3 283 aa6.36□□□□□ -1.39
NIPBL-207ENST00000513819 AGRPO00253 132 aa6.36□□□□□ -1.39
NIPBL-207ENST00000513819 ADCY3O60266 1144 aa6.36□□□□□ -1.39
NIPBL-207ENST00000513819 CYP7A1P22680 504 aa6.36□□□□□ -1.39
NIPBL-207ENST00000513819 SFRP5Q5T4F7 317 aa6.36□□□□□ -1.39
NIPBL-207ENST00000513819 OGFOD3Q6PK18 319 aa6.36□□□□□ -1.39
NIPBL-207ENST00000513819 BRF1Q92994 677 aa6.36□□□□□ -1.39
NIPBL-207ENST00000513819 Q96M66 194 aa6.36□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 76.4 ms