RNA–Protein interactions for RNA: ENST00000513726.5

NSD2-223, Transcript of nuclear receptor binding SET domain protein 2, human

TSL 3

Gene NSD2, Length 648 nt, Biotype processed transcript, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NSD2-223	ENST00000513726	HPS5	Q9UPZ3	1129 aa		13.42	□□□□□ -0.26
NSD2-223	ENST00000513726	GTF3C3	Q9Y5Q9	886 aa		13.42	□□□□□ -0.26
NSD2-223	ENST00000513726	KIAA0100	Q14667	2235 aa	Known RBP	13.41	□□□□□ -0.26
NSD2-223	ENST00000513726	PARP14	Q460N5	1801 aa		13.41	□□□□□ -0.26
NSD2-223	ENST00000513726	WDR46	O15213	610 aa	Known RBP	13.41	□□□□□ -0.26
NSD2-223	ENST00000513726	FOXP2	O15409	715 aa		13.41	□□□□□ -0.26
NSD2-223	ENST00000513726	ORC4	O43929	436 aa		13.41	□□□□□ -0.26
NSD2-223	ENST00000513726	FGA	P02671	866 aa		13.41	□□□□□ -0.26
NSD2-223	ENST00000513726	VCAM1	P19320	739 aa		13.41	□□□□□ -0.26
NSD2-223	ENST00000513726	HERVK_113	P62684	666 aa		13.41	□□□□□ -0.26
NSD2-223	ENST00000513726	CCDC129	Q6ZRS4	1044 aa		13.41	□□□□□ -0.26
NSD2-223	ENST00000513726	NBPF11	Q86T75	865 aa		13.41	□□□□□ -0.26
NSD2-223	ENST00000513726	NEDD1	Q8NHV4	660 aa		13.41	□□□□□ -0.26
NSD2-223	ENST00000513726	MKL1	Q969V6	931 aa		13.41	□□□□□ -0.26
NSD2-223	ENST00000513726	P2RX7	Q99572	595 aa	Known RBP	13.41	□□□□□ -0.26
NSD2-223	ENST00000513726	DSCC1	Q9BVC3	393 aa		13.41	□□□□□ -0.26
NSD2-223	ENST00000513726	SRRD	Q9UH36	339 aa		13.41	□□□□□ -0.26
NSD2-223	ENST00000513726	RABGAP1	Q9Y3P9	1069 aa		13.41	□□□□□ -0.26
NSD2-223	ENST00000513726	RLF	Q13129	1914 aa		13.41	□□□□□ -0.26
NSD2-223	ENST00000513726	IGKV6D-41	A0A0C4DH26	115 aa		13.4	□□□□□ -0.26
NSD2-223	ENST00000513726		A0A1W2PRG0	241 aa		13.4	□□□□□ -0.26
NSD2-223	ENST00000513726	FMNL1	O95466	1100 aa	Predicted RBP	13.4	□□□□□ -0.26
NSD2-223	ENST00000513726	TSPY3	P0CV98	308 aa		13.4	□□□□□ -0.26
NSD2-223	ENST00000513726	TSPY8	P0CW00	308 aa		13.4	□□□□□ -0.26
NSD2-223	ENST00000513726	EEF2	P13639	858 aa	Known RBP	13.4	□□□□□ -0.26
NSD2-223	ENST00000513726	GSPT1	P15170	499 aa	Known RBP	13.4	□□□□□ -0.26
NSD2-223	ENST00000513726	CCNA1	P78396	465 aa		13.4	□□□□□ -0.26
NSD2-223	ENST00000513726	COG2	Q14746	738 aa		13.4	□□□□□ -0.26
NSD2-223	ENST00000513726	CWC27	Q6UX04	472 aa	Known RBP	13.4	□□□□□ -0.26
NSD2-223	ENST00000513726	ZNF589	Q86UQ0	364 aa	Predicted RBP	13.4	□□□□□ -0.26
NSD2-223	ENST00000513726	SIAH1	Q8IUQ4	282 aa		13.4	□□□□□ -0.26
NSD2-223	ENST00000513726	ANKRD13C	Q8N6S4	541 aa		13.4	□□□□□ -0.26
NSD2-223	ENST00000513726	MB21D1	Q8N884	522 aa		13.4	□□□□□ -0.26
NSD2-223	ENST00000513726	GPRC5A	Q8NFJ5	357 aa		13.4	□□□□□ -0.26
NSD2-223	ENST00000513726	COA7	Q96BR5	231 aa		13.4	□□□□□ -0.26
NSD2-223	ENST00000513726	TRIM47	Q96LD4	638 aa		13.4	□□□□□ -0.26
NSD2-223	ENST00000513726	RNF41	Q9H4P4	317 aa	Predicted RBP	13.4	□□□□□ -0.26
NSD2-223	ENST00000513726	CTNNA3	Q9UI47	895 aa		13.4	□□□□□ -0.26
NSD2-223	ENST00000513726	DDX52	Q9Y2R4	599 aa	Known RBP eCLIP	13.4	□□□□□ -0.26
NSD2-223	ENST00000513726	SMIM22	K7EJ46	135 aa		13.39	□□□□□ -0.27
NSD2-223	ENST00000513726	TTLL1	O95922	423 aa		13.39	□□□□□ -0.27
NSD2-223	ENST00000513726	MAPK4	P31152	587 aa		13.39	□□□□□ -0.27
NSD2-223	ENST00000513726	ZYX	Q15942	572 aa	Known RBP	13.39	□□□□□ -0.27
NSD2-223	ENST00000513726	VPS53	Q5VIR6	699 aa		13.39	□□□□□ -0.27
NSD2-223	ENST00000513726	ARMC5	Q96C12	935 aa		13.39	□□□□□ -0.27
NSD2-223	ENST00000513726	GNL3	Q9BVP2	549 aa	Known RBP eCLIP	13.39	□□□□□ -0.27
NSD2-223	ENST00000513726	RPAP3	Q9H6T3	665 aa	Predicted RBP	13.39	□□□□□ -0.27
NSD2-223	ENST00000513726	MTMR4	Q9NYA4	1195 aa		13.39	□□□□□ -0.27
NSD2-223	ENST00000513726	RBBP6	Q7Z6E9	1792 aa	Known RBP	13.39	□□□□□ -0.27
NSD2-223	ENST00000513726	ZSWIM8	A7E2V4	1837 aa		13.39	□□□□□ -0.27
NSD2-223	ENST00000513726	CCDC85C	A6NKD9	419 aa		13.38	□□□□□ -0.27
NSD2-223	ENST00000513726	TNPO2	O14787	897 aa	Known RBP	13.38	□□□□□ -0.27
NSD2-223	ENST00000513726	CAPN2	P17655	700 aa		13.38	□□□□□ -0.27
NSD2-223	ENST00000513726	TFAP4	Q01664	338 aa		13.38	□□□□□ -0.27
NSD2-223	ENST00000513726	IRF5	Q13568	498 aa		13.38	□□□□□ -0.27
NSD2-223	ENST00000513726	RBPJL	Q9UBG7	517 aa		13.38	□□□□□ -0.27
NSD2-223	ENST00000513726		A0A0G2JMZ2	1700 aa		13.37	□□□□□ -0.27
NSD2-223	ENST00000513726	TSPY2	A6NKD2	308 aa		13.37	□□□□□ -0.27
NSD2-223	ENST00000513726	ZNF213	O14771	459 aa		13.37	□□□□□ -0.27
NSD2-223	ENST00000513726	CHML	P26374	656 aa		13.37	□□□□□ -0.27
NSD2-223	ENST00000513726	ERVK-9	P63128	1117 aa		13.37	□□□□□ -0.27
NSD2-223	ENST00000513726	ERVK-24	P63145	666 aa		13.37	□□□□□ -0.27
NSD2-223	ENST00000513726	CCDC178	Q5BJE1	867 aa		13.37	□□□□□ -0.27
NSD2-223	ENST00000513726	BMP2KL	Q5H9B9	411 aa		13.37	□□□□□ -0.27
NSD2-223	ENST00000513726	AKNAD1	Q5T1N1	836 aa		13.37	□□□□□ -0.27
NSD2-223	ENST00000513726	MFSD6	Q6ZSS7	791 aa		13.37	□□□□□ -0.27
NSD2-223	ENST00000513726	SLAIN1	Q8ND83	568 aa		13.37	□□□□□ -0.27
NSD2-223	ENST00000513726	GMCL1P1	Q8NEA9	526 aa		13.37	□□□□□ -0.27
NSD2-223	ENST00000513726	RAET1E	Q8TD07	263 aa		13.37	□□□□□ -0.27
NSD2-223	ENST00000513726	PXYLP1	Q8TE99	480 aa		13.37	□□□□□ -0.27
NSD2-223	ENST00000513726	STAG1	Q8WVM7	1258 aa		13.37	□□□□□ -0.27
NSD2-223	ENST00000513726	ARHGAP39	Q9C0H5	1083 aa		13.37	□□□□□ -0.27
NSD2-223	ENST00000513726	TCP11L1	Q9NUJ3	509 aa		13.37	□□□□□ -0.27
NSD2-223	ENST00000513726	SPDYE16	A6NNV3	312 aa	Predicted RBP	13.36	□□□□□ -0.27
NSD2-223	ENST00000513726	PRDM1	O75626	825 aa		13.36	□□□□□ -0.27
NSD2-223	ENST00000513726	FDX1	P10109	184 aa		13.36	□□□□□ -0.27
NSD2-223	ENST00000513726	CTGF	P29279	349 aa		13.36	□□□□□ -0.27
NSD2-223	ENST00000513726	NOV	P48745	357 aa		13.36	□□□□□ -0.27
NSD2-223	ENST00000513726	RGS19	P49795	217 aa		13.36	□□□□□ -0.27
NSD2-223	ENST00000513726	CAP1	Q01518	475 aa		13.36	□□□□□ -0.27
NSD2-223	ENST00000513726	ATP2B2	Q01814	1243 aa		13.36	□□□□□ -0.27
NSD2-223	ENST00000513726	CTDSPL2	Q05D32	466 aa		13.36	□□□□□ -0.27
NSD2-223	ENST00000513726	IMMT	Q16891	758 aa	Known RBP	13.36	□□□□□ -0.27
NSD2-223	ENST00000513726	SLC9C1	Q4G0N8	1177 aa		13.36	□□□□□ -0.27
NSD2-223	ENST00000513726	CASC1	Q6TDU7	716 aa		13.36	□□□□□ -0.27
NSD2-223	ENST00000513726	CCAR1	Q8IX12	1150 aa	Known RBP	13.36	□□□□□ -0.27
NSD2-223	ENST00000513726	TRMT44	Q8IYL2	757 aa	Known RBP	13.36	□□□□□ -0.27
NSD2-223	ENST00000513726	SOCS4	Q8WXH5	440 aa		13.36	□□□□□ -0.27
NSD2-223	ENST00000513726	CEP95	Q96GE4	821 aa		13.36	□□□□□ -0.27
NSD2-223	ENST00000513726	TTC14	Q96N46	770 aa		13.36	□□□□□ -0.27
NSD2-223	ENST00000513726	TANGO6	Q9C0B7	1094 aa		13.36	□□□□□ -0.27
NSD2-223	ENST00000513726	CLIP2	Q9UDT6	1046 aa		13.36	□□□□□ -0.27
NSD2-223	ENST00000513726	PTCH2	Q9Y6C5	1203 aa		13.36	□□□□□ -0.27
NSD2-223	ENST00000513726	ZNFX1	Q9P2E3	1918 aa	Known RBP	13.35	□□□□□ -0.27
NSD2-223	ENST00000513726	COL11A1	P12107	1806 aa	Predicted RBP	13.35	□□□□□ -0.27
NSD2-223	ENST00000513726		F5H6K3	240 aa		13.35	□□□□□ -0.27
NSD2-223	ENST00000513726	RANBP6	O60518	1105 aa	Known RBP	13.35	□□□□□ -0.27
NSD2-223	ENST00000513726	FLOT1	O75955	427 aa		13.35	□□□□□ -0.27
NSD2-223	ENST00000513726	COPB2	P35606	906 aa		13.35	□□□□□ -0.27
NSD2-223	ENST00000513726	KLRC3	Q07444	240 aa		13.35	□□□□□ -0.27

Retrieved 100 of 20,778 RNA–protein pairs in 70.3 ms