RNA–Protein interactions for RNA: ENST00000512275.5

RFC1-213, Transcript of replication factor C subunit 1, humanhuman

TSL 3

Gene RFC1, Length 841 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-213ENST00000512275 IL22RA1Q8N6P7 574 aa9.44□□□□□ -0.9
RFC1-213ENST00000512275 MKL1Q969V6 931 aa9.44□□□□□ -0.9
RFC1-213ENST00000512275 CBX8Q9HC52 389 aa9.44□□□□□ -0.9
RFC1-213ENST00000512275 JPH1Q9HDC5 661 aaPredicted RBP9.44□□□□□ -0.9
RFC1-213ENST00000512275 ZNRF3Q9ULT6 936 aa9.44□□□□□ -0.9
RFC1-213ENST00000512275 ATP7BP35670 1465 aa9.44□□□□□ -0.9
RFC1-213ENST00000512275 MON2Q7Z3U7 1717 aa9.44□□□□□ -0.9
RFC1-213ENST00000512275 KIF20BQ96Q89 1820 aa9.44□□□□□ -0.9
RFC1-213ENST00000512275 ADGRL3Q9HAR2 1447 aa9.43□□□□□ -0.9
RFC1-213ENST00000512275 KRBA1A5PL33 1030 aa9.43□□□□□ -0.9
RFC1-213ENST00000512275 GIPRP48546 466 aa9.43□□□□□ -0.9
RFC1-213ENST00000512275 ZNF165P49910 485 aa9.43□□□□□ -0.9
RFC1-213ENST00000512275 RPL6Q02878 288 aaKnown RBP9.43□□□□□ -0.9
RFC1-213ENST00000512275 RAB33AQ14088 237 aa9.43□□□□□ -0.9
RFC1-213ENST00000512275 BMS1Q14692 1282 aaKnown RBP9.43□□□□□ -0.9
RFC1-213ENST00000512275 LINC00114Q6XXX2 140 aa9.43□□□□□ -0.9
RFC1-213ENST00000512275 FAM169BQ8N8A8 192 aa9.43□□□□□ -0.9
RFC1-213ENST00000512275 CPLX3Q8WVH0 158 aa9.43□□□□□ -0.9
RFC1-213ENST00000512275 ANAPC16Q96DE5 110 aa9.43□□□□□ -0.9
RFC1-213ENST00000512275 PANK3Q9H999 370 aa9.43□□□□□ -0.9
RFC1-213ENST00000512275 BRMS1Q9HCU9 246 aa9.43□□□□□ -0.9
RFC1-213ENST00000512275 TMA7Q9Y2S6 64 aaKnown RBP9.43□□□□□ -0.9
RFC1-213ENST00000512275 PPME1Q9Y570 386 aa9.43□□□□□ -0.9
RFC1-213ENST00000512275 PRR36Q9H6K5 1346 aa9.42□□□□□ -0.9
RFC1-213ENST00000512275 TLDC2A0PJX2 215 aa9.42□□□□□ -0.9
RFC1-213ENST00000512275 K7ELQ4 463 aaPredicted RBP9.42□□□□□ -0.9
RFC1-213ENST00000512275 EIF4EBP3O60516 100 aaPredicted RBP9.42□□□□□ -0.9
RFC1-213ENST00000512275 C19orf57Q0VDD7 668 aa9.42□□□□□ -0.9
RFC1-213ENST00000512275 PDZRN4Q6ZMN7 1036 aaPredicted RBP9.42□□□□□ -0.9
RFC1-213ENST00000512275 ILDR2Q71H61 639 aa9.42□□□□□ -0.9
RFC1-213ENST00000512275 HNRNPLLQ8WVV9 542 aaKnown RBP9.42□□□□□ -0.9
RFC1-213ENST00000512275 BTBD6Q96KE9 485 aa9.42□□□□□ -0.9
RFC1-213ENST00000512275 PUS7Q96PZ0 661 aaKnown RBP9.42□□□□□ -0.9
RFC1-213ENST00000512275 SLC12A5Q9H2X9 1139 aa9.42□□□□□ -0.9
RFC1-213ENST00000512275 EHMT1Q9H9B1 1298 aa9.42□□□□□ -0.9
RFC1-213ENST00000512275 OSGEPQ9NPF4 335 aa9.42□□□□□ -0.9
RFC1-213ENST00000512275 SIRPGQ9P1W8 387 aa9.42□□□□□ -0.9
RFC1-213ENST00000512275 POLR3KQ9Y2Y1 108 aaPredicted RBP9.42□□□□□ -0.9
RFC1-213ENST00000512275 ANKRD26Q9UPS8 1709 aa9.42□□□□□ -0.9
RFC1-213ENST00000512275 PPIP5K1Q6PFW1 1433 aa9.41□□□□□ -0.9
RFC1-213ENST00000512275 ZNF335Q9H4Z2 1342 aaPredicted RBP9.41□□□□□ -0.9
RFC1-213ENST00000512275 BPNT1O95861 308 aa9.41□□□□□ -0.9
RFC1-213ENST00000512275 GSTM4Q03013 218 aa9.41□□□□□ -0.9
RFC1-213ENST00000512275 CLCQ05315 142 aa9.41□□□□□ -0.9
RFC1-213ENST00000512275 NFE2L2Q16236 605 aa9.41□□□□□ -0.9
RFC1-213ENST00000512275 MAP1SQ66K74 1059 aaPredicted RBP9.41□□□□□ -0.9
RFC1-213ENST00000512275 TXNDC11Q6PKC3 985 aa9.41□□□□□ -0.9
RFC1-213ENST00000512275 ALYREFQ86V81 257 aaKnown RBP9.41□□□□□ -0.9
RFC1-213ENST00000512275 RBBP8NLQ8NC74 664 aaPredicted RBP9.41□□□□□ -0.9
RFC1-213ENST00000512275 PRDM6Q9NQX0 595 aa9.41□□□□□ -0.9
RFC1-213ENST00000512275 CD163L1Q9NR16 1453 aa9.4□□□□□ -0.9
RFC1-213ENST00000512275 NSD3Q9BZ95 1437 aa9.4□□□□□ -0.9
RFC1-213ENST00000512275 TMEM94Q12767 1356 aa9.4□□□□□ -0.9
RFC1-213ENST00000512275 LINC01387J3KSC0 135 aa9.4□□□□□ -0.9
RFC1-213ENST00000512275 SMAD7O15105 426 aaKnown RBP9.4□□□□□ -0.9
RFC1-213ENST00000512275 ANP32CO43423 234 aa9.4□□□□□ -0.9
RFC1-213ENST00000512275 ADAM23O75077 832 aa9.4□□□□□ -0.9
RFC1-213ENST00000512275 ATE1O95260 518 aa9.4□□□□□ -0.9
RFC1-213ENST00000512275 ECEL1O95672 775 aa9.4□□□□□ -0.9
RFC1-213ENST00000512275 MCM4P33991 863 aa9.4□□□□□ -0.9
RFC1-213ENST00000512275 EIF6P56537 245 aaKnown RBP9.4□□□□□ -0.9
RFC1-213ENST00000512275 TNNI3KQ59H18 835 aa9.4□□□□□ -0.9
RFC1-213ENST00000512275 XP32Q5T750 250 aa9.4□□□□□ -0.9
RFC1-213ENST00000512275 OR6P1Q8NGX9 317 aa9.4□□□□□ -0.9
RFC1-213ENST00000512275 FERD3LQ96RJ6 166 aa9.4□□□□□ -0.9
RFC1-213ENST00000512275 KRT82Q9NSB4 513 aa9.4□□□□□ -0.9
RFC1-213ENST00000512275 NRKQ7Z2Y5 1582 aa9.4□□□□□ -0.9
RFC1-213ENST00000512275 LRRC7Q96NW7 1537 aa9.4□□□□□ -0.91
RFC1-213ENST00000512275 A0A1W2PP64 1363 aa9.39□□□□□ -0.91
RFC1-213ENST00000512275 ANKRD36BQ8N2N9 1353 aa9.39□□□□□ -0.91
RFC1-213ENST00000512275 NINLQ9Y2I6 1382 aa9.39□□□□□ -0.91
RFC1-213ENST00000512275 FSCN2O14926 492 aa9.39□□□□□ -0.91
RFC1-213ENST00000512275 LILRB5O75023 590 aa9.39□□□□□ -0.91
RFC1-213ENST00000512275 CYP11A1P05108 521 aa9.39□□□□□ -0.91
RFC1-213ENST00000512275 IMPDH2P12268 514 aa9.39□□□□□ -0.91
RFC1-213ENST00000512275 CDC25BP30305 580 aa9.39□□□□□ -0.91
RFC1-213ENST00000512275 DGKGP49619 791 aa9.39□□□□□ -0.91
RFC1-213ENST00000512275 JAZF1Q86VZ6 243 aa9.39□□□□□ -0.91
RFC1-213ENST00000512275 NLGN1Q8N2Q7 840 aa9.39□□□□□ -0.91
RFC1-213ENST00000512275 GPBAR1Q8TDU6 330 aa9.39□□□□□ -0.91
RFC1-213ENST00000512275 SLC7A3Q8WY07 619 aa9.39□□□□□ -0.91
RFC1-213ENST00000512275 M0R082 166 aa9.38□□□□□ -0.91
RFC1-213ENST00000512275 GFRA2O00451 464 aa9.38□□□□□ -0.91
RFC1-213ENST00000512275 GNB5O14775 395 aa9.38□□□□□ -0.91
RFC1-213ENST00000512275 CDK8P49336 464 aa9.38□□□□□ -0.91
RFC1-213ENST00000512275 FAM117BQ6P1L5 589 aa9.38□□□□□ -0.91
RFC1-213ENST00000512275 GK5Q6ZS86 529 aa9.38□□□□□ -0.91
RFC1-213ENST00000512275 C8orf86Q6ZUL3 223 aa9.38□□□□□ -0.91
RFC1-213ENST00000512275 CHSY3Q70JA7 882 aa9.38□□□□□ -0.91
RFC1-213ENST00000512275 LSRQ86X29 649 aaPredicted RBP9.38□□□□□ -0.91
RFC1-213ENST00000512275 ZNF417Q8TAU3 575 aa9.38□□□□□ -0.91
RFC1-213ENST00000512275 KCNB2Q92953 911 aa9.38□□□□□ -0.91
RFC1-213ENST00000512275 ZNF587Q96SQ5 575 aaPredicted RBP9.38□□□□□ -0.91
RFC1-213ENST00000512275 TRIM55Q9BYV6 548 aa9.38□□□□□ -0.91
RFC1-213ENST00000512275 CCDC86Q9H6F5 360 aaKnown RBP9.38□□□□□ -0.91
RFC1-213ENST00000512275 ANKARQ7Z5J8 1434 aa9.38□□□□□ -0.91
RFC1-213ENST00000512275 KIF1AQ12756 1690 aa9.37□□□□□ -0.91
RFC1-213ENST00000512275 CTSBP07858 339 aa9.37□□□□□ -0.91
RFC1-213ENST00000512275 ARL4DP49703 201 aa9.37□□□□□ -0.91
RFC1-213ENST00000512275 COL9A3Q14050 684 aaPredicted RBP9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 103.3 ms