RNA–Protein interactions for RNA: ENST00000509989.5

SNF8-206, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 3

Gene SNF8, Length 677 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-206ENST00000509989 SPDYE16A6NNV3 312 aaPredicted RBP16.14■□□□□ 0.17
SNF8-206ENST00000509989 USP17L15C9J2P7 530 aa16.14■□□□□ 0.17
SNF8-206ENST00000509989 USP17L13C9JLJ4 530 aa16.14■□□□□ 0.17
SNF8-206ENST00000509989 USP17L11C9JVI0 530 aa16.14■□□□□ 0.17
SNF8-206ENST00000509989 USP17L18D6R9N7 530 aa16.14■□□□□ 0.17
SNF8-206ENST00000509989 USP17L22D6RA61 530 aa16.14■□□□□ 0.17
SNF8-206ENST00000509989 USP17L17D6RBQ6 530 aa16.14■□□□□ 0.17
SNF8-206ENST00000509989 USP17L19D6RCP7 530 aa16.14■□□□□ 0.17
SNF8-206ENST00000509989 USP17L20D6RJB6 530 aa16.14■□□□□ 0.17
SNF8-206ENST00000509989 FMNL1O95466 1100 aaPredicted RBP16.14■□□□□ 0.17
SNF8-206ENST00000509989 USP14P54578 494 aa16.14■□□□□ 0.17
SNF8-206ENST00000509989 SOX10P56693 466 aa16.14■□□□□ 0.17
SNF8-206ENST00000509989 PRKCZQ05513 592 aa16.14■□□□□ 0.17
SNF8-206ENST00000509989 USP17L24Q0WX57 530 aa16.14■□□□□ 0.17
SNF8-206ENST00000509989 FAM110CQ1W6H9 321 aa16.14■□□□□ 0.17
SNF8-206ENST00000509989 ZNF444Q8N0Y2 327 aaPredicted RBP16.14■□□□□ 0.17
SNF8-206ENST00000509989 LRRC47Q8N1G4 583 aaKnown RBP16.14■□□□□ 0.17
SNF8-206ENST00000509989 NEDD1Q8NHV4 660 aa16.14■□□□□ 0.17
SNF8-206ENST00000509989 SH3TC2Q8TF17 1288 aa16.14■□□□□ 0.17
SNF8-206ENST00000509989 CCDC136Q96JN2 1154 aa16.14■□□□□ 0.17
SNF8-206ENST00000509989 PORCNQ9H237 461 aa16.14■□□□□ 0.17
SNF8-206ENST00000509989 KANSL2Q9H9L4 492 aa16.14■□□□□ 0.17
SNF8-206ENST00000509989 CLIP2Q9UDT6 1046 aa16.14■□□□□ 0.17
SNF8-206ENST00000509989 PNMA3Q9UL41 463 aa16.14■□□□□ 0.17
SNF8-206ENST00000509989 TAF6LQ9Y6J9 622 aa16.14■□□□□ 0.17
SNF8-206ENST00000509989 SMCHD1A6NHR9 2005 aa16.14■□□□□ 0.17
SNF8-206ENST00000509989 MYCP01106 439 aaPredicted RBP16.13■□□□□ 0.17
SNF8-206ENST00000509989 FGRP09769 529 aa16.13■□□□□ 0.17
SNF8-206ENST00000509989 PABPC4Q13310 644 aaKnown RBP eCLIP16.13■□□□□ 0.172e-8■■■□□ 15.8
SNF8-206ENST00000509989 SAMD1Q6SPF0 538 aaPredicted RBP16.13■□□□□ 0.17
SNF8-206ENST00000509989 TICAM2Q86XR7 235 aa16.13■□□□□ 0.17
SNF8-206ENST00000509989 ARHGEF10LQ9HCE6 1279 aa16.13■□□□□ 0.17
SNF8-206ENST00000509989 MTMR4Q9NYA4 1195 aa16.13■□□□□ 0.17
SNF8-206ENST00000509989 MORF4L1Q9UBU8 362 aa16.13■□□□□ 0.17
SNF8-206ENST00000509989 SRRDQ9UH36 339 aa16.13■□□□□ 0.17
SNF8-206ENST00000509989 NEDD4P46934 1319 aa16.13■□□□□ 0.17
SNF8-206ENST00000509989 PLIN4Q96Q06 1357 aa16.13■□□□□ 0.17
SNF8-206ENST00000509989 RAD21O60216 631 aa16.12■□□□□ 0.17
SNF8-206ENST00000509989 PDE4BQ07343 736 aa16.12■□□□□ 0.17
SNF8-206ENST00000509989 KIF22Q14807 665 aa16.12■□□□□ 0.17
SNF8-206ENST00000509989 PKN2Q16513 984 aaKnown RBP16.12■□□□□ 0.17
SNF8-206ENST00000509989 RRP12Q5JTH9 1297 aaKnown RBP16.12■□□□□ 0.17
SNF8-206ENST00000509989 FAM83BQ5T0W9 1011 aa16.12■□□□□ 0.17
SNF8-206ENST00000509989 TANGO6Q9C0B7 1094 aa16.12■□□□□ 0.17
SNF8-206ENST00000509989 NYAP2Q9P242 653 aa16.12■□□□□ 0.17
SNF8-206ENST00000509989 TAOK2Q9UL54 1235 aa16.12■□□□□ 0.17
SNF8-206ENST00000509989 KIAA0100Q14667 2235 aaKnown RBP16.12■□□□□ 0.17
SNF8-206ENST00000509989 MYPNQ86TC9 1320 aa16.12■□□□□ 0.17
SNF8-206ENST00000509989 RANBP6O60518 1105 aaKnown RBP16.11■□□□□ 0.17
SNF8-206ENST00000509989 TSPY3P0CV98 308 aa16.11■□□□□ 0.17
SNF8-206ENST00000509989 TSPY8P0CW00 308 aa16.11■□□□□ 0.17
SNF8-206ENST00000509989 GCLCP48506 637 aaPredicted RBP16.11■□□□□ 0.17
SNF8-206ENST00000509989 FCGRTP55899 365 aa16.11■□□□□ 0.17
SNF8-206ENST00000509989 ATG4CQ96DT6 458 aa16.11■□□□□ 0.17
SNF8-206ENST00000509989 ZMYM6O95789 1325 aa16.11■□□□□ 0.17
SNF8-206ENST00000509989 F5H6K3 240 aa16.1■□□□□ 0.17
SNF8-206ENST00000509989 HIP1O00291 1037 aa16.1■□□□□ 0.17
SNF8-206ENST00000509989 TNPO2O14787 897 aaKnown RBP16.1■□□□□ 0.17
SNF8-206ENST00000509989 ORC4O43929 436 aa16.1■□□□□ 0.17
SNF8-206ENST00000509989 NDUFB10O96000 172 aa16.1■□□□□ 0.17
SNF8-206ENST00000509989 ELNP15502 786 aa16.1■□□□□ 0.17
SNF8-206ENST00000509989 ERVK-9P63128 1117 aa16.1■□□□□ 0.17
SNF8-206ENST00000509989 ERVK-24P63145 666 aa16.1■□□□□ 0.17
SNF8-206ENST00000509989 KLRC3Q07444 240 aa16.1■□□□□ 0.17
SNF8-206ENST00000509989 DSCC1Q9BVC3 393 aa16.1■□□□□ 0.17
SNF8-206ENST00000509989 TOMM22Q9NS69 142 aa16.1■□□□□ 0.17
SNF8-206ENST00000509989 GJD2Q9UKL4 321 aa16.1■□□□□ 0.17
SNF8-206ENST00000509989 RBBP6Q7Z6E9 1792 aaKnown RBP16.1■□□□□ 0.17
SNF8-206ENST00000509989 POTEFA5A3E0 1075 aa16.09■□□□□ 0.17
SNF8-206ENST00000509989 SGSM2O43147 1006 aa16.09■□□□□ 0.17
SNF8-206ENST00000509989 DSG3P32926 999 aa16.09■□□□□ 0.17
SNF8-206ENST00000509989 FLT3LGP49771 235 aa16.09■□□□□ 0.17
SNF8-206ENST00000509989 COL9A3Q14050 684 aaPredicted RBP16.09■□□□□ 0.17
SNF8-206ENST00000509989 AKNAD1Q5T1N1 836 aa16.09■□□□□ 0.17
SNF8-206ENST00000509989 GPRC5AQ8NFJ5 357 aa16.09■□□□□ 0.17
SNF8-206ENST00000509989 MKL1Q969V6 931 aa16.09■□□□□ 0.17
SNF8-206ENST00000509989 ZKSCAN3Q9BRR0 538 aa16.09■□□□□ 0.17
SNF8-206ENST00000509989 TSPY2A6NKD2 308 aa16.08■□□□□ 0.16
SNF8-206ENST00000509989 WDR46O15213 610 aaKnown RBP16.08■□□□□ 0.16
SNF8-206ENST00000509989 FLOT1O75955 427 aa16.08■□□□□ 0.16
SNF8-206ENST00000509989 SLC3A2P08195 630 aaKnown RBP16.08■□□□□ 0.16
SNF8-206ENST00000509989 COG2Q14746 738 aa16.08■□□□□ 0.16
SNF8-206ENST00000509989 MTFR1Q15390 333 aa16.08■□□□□ 0.16
SNF8-206ENST00000509989 RCSD1Q6JBY9 416 aa16.08■□□□□ 0.16
SNF8-206ENST00000509989 LBX2Q6XYB7 198 aa16.08■□□□□ 0.16
SNF8-206ENST00000509989 STAG1Q8WVM7 1258 aa16.08■□□□□ 0.16
SNF8-206ENST00000509989 MTMR7Q9Y216 660 aa16.08■□□□□ 0.16
SNF8-206ENST00000509989 RABGAP1Q9Y3P9 1069 aa16.08■□□□□ 0.16
SNF8-206ENST00000509989 BRCA2P51587 3418 aa16.08■□□□□ 0.16
SNF8-206ENST00000509989 B4E1Z4 1266 aa16.07■□□□□ 0.16
SNF8-206ENST00000509989 TTLL1O95922 423 aa16.07■□□□□ 0.16
SNF8-206ENST00000509989 NEFLP07196 543 aa16.07■□□□□ 0.16
SNF8-206ENST00000509989 MFAP1P55081 439 aaKnown RBP16.07■□□□□ 0.16
SNF8-206ENST00000509989 TRIM32Q13049 653 aa16.07■□□□□ 0.16
SNF8-206ENST00000509989 LPAR1Q92633 364 aa16.07■□□□□ 0.16
SNF8-206ENST00000509989 ARMC5Q96C12 935 aa16.07■□□□□ 0.16
SNF8-206ENST00000509989 ZNF333Q96JL9 665 aa16.07■□□□□ 0.16
SNF8-206ENST00000509989 SH2D4AQ9H788 454 aa16.07■□□□□ 0.16
SNF8-206ENST00000509989 GOPCQ9HD26 462 aa16.07■□□□□ 0.16
SNF8-206ENST00000509989 PLXNA1Q9UIW2 1896 aa16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms