RNA–Protein interactions for RNA: ENST00000509748.1

LIN54-208, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

TSL 5

Gene LIN54, Length 729 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-208ENST00000509748 HMGCRP04035 888 aa25.42■■□□□ 1.66
LIN54-208ENST00000509748 CYP2B6P20813 491 aa25.42■■□□□ 1.66
LIN54-208ENST00000509748 PLEKHH3Q7Z736 793 aa25.42■■□□□ 1.66
LIN54-208ENST00000509748 TRIB2Q92519 343 aa25.42■■□□□ 1.66
LIN54-208ENST00000509748 NUDT12Q9BQG2 462 aa25.42■■□□□ 1.66
LIN54-208ENST00000509748 ARHGEF10LQ9HCE6 1279 aa25.42■■□□□ 1.66
LIN54-208ENST00000509748 ROBO3Q96MS0 1386 aa25.42■■□□□ 1.66
LIN54-208ENST00000509748 PATL2C9JE40 543 aaKnown RBP25.41■■□□□ 1.66
LIN54-208ENST00000509748 XRCC5P13010 732 aaKnown RBP25.41■■□□□ 1.66
LIN54-208ENST00000509748 EEF2P13639 858 aaKnown RBP25.41■■□□□ 1.66
LIN54-208ENST00000509748 GNAT2P19087 354 aa25.41■■□□□ 1.66
LIN54-208ENST00000509748 RASA1P20936 1047 aa25.41■■□□□ 1.66
LIN54-208ENST00000509748 COG2Q14746 738 aa25.41■■□□□ 1.66
LIN54-208ENST00000509748 LRRFIP1Q32MZ4 808 aaKnown RBP25.41■■□□□ 1.66
LIN54-208ENST00000509748 SOCS4Q8WXH5 440 aa25.41■■□□□ 1.66
LIN54-208ENST00000509748 FSD1Q9BTV5 496 aa25.41■■□□□ 1.66
LIN54-208ENST00000509748 VCPKMTQ9H867 229 aa25.41■■□□□ 1.66
LIN54-208ENST00000509748 KANSL2Q9H9L4 492 aa25.41■■□□□ 1.66
LIN54-208ENST00000509748 MINDY4BA8MYZ0 360 aa25.4■■□□□ 1.66
LIN54-208ENST00000509748 PDE1AP54750 535 aa25.4■■□□□ 1.66
LIN54-208ENST00000509748 IFNL3Q8IZI9 196 aa25.4■■□□□ 1.66
LIN54-208ENST00000509748 LPAR1Q92633 364 aa25.4■■□□□ 1.66
LIN54-208ENST00000509748 DEFB118Q96PH6 123 aa25.4■■□□□ 1.66
LIN54-208ENST00000509748 CRISPLD2Q9H0B8 497 aa25.4■■□□□ 1.66
LIN54-208ENST00000509748 HOXC10Q9NYD6 342 aa25.4■■□□□ 1.66
LIN54-208ENST00000509748 MAP3K21Q5TCX8 1036 aa25.39■■□□□ 1.66
LIN54-208ENST00000509748 SMC5Q8IY18 1101 aa25.39■■□□□ 1.66
LIN54-208ENST00000509748 SPICE1Q8N0Z3 855 aa25.39■■□□□ 1.66
LIN54-208ENST00000509748 PARP14Q460N5 1801 aa25.38■■□□□ 1.65
LIN54-208ENST00000509748 DSG3P32926 999 aa25.38■■□□□ 1.65
LIN54-208ENST00000509748 CCNA1P78396 465 aa25.38■■□□□ 1.65
LIN54-208ENST00000509748 CCAR1Q8IX12 1150 aaKnown RBP25.38■■□□□ 1.65
LIN54-208ENST00000509748 STK11IPQ8N1F8 1099 aa25.38■■□□□ 1.65
LIN54-208ENST00000509748 EXOC6Q8TAG9 804 aa25.38■■□□□ 1.65
LIN54-208ENST00000509748 TANGO6Q9C0B7 1094 aa25.38■■□□□ 1.65
LIN54-208ENST00000509748 XRN2Q9H0D6 950 aaKnown RBP eCLIP25.38■■□□□ 1.65
LIN54-208ENST00000509748 SH2D4AQ9H788 454 aa25.38■■□□□ 1.65
LIN54-208ENST00000509748 A0A0G2JMZ2 1700 aa25.37■■□□□ 1.65
LIN54-208ENST00000509748 FOXP2O15409 715 aa25.37■■□□□ 1.65
LIN54-208ENST00000509748 IGHDP01880 384 aa25.37■■□□□ 1.65
LIN54-208ENST00000509748 ZBTB47Q9UFB7 747 aaPredicted RBP25.37■■□□□ 1.65
LIN54-208ENST00000509748 RPTORQ8N122 1335 aa25.37■■□□□ 1.65
LIN54-208ENST00000509748 WDR46O15213 610 aaKnown RBP25.36■■□□□ 1.65
LIN54-208ENST00000509748 APPP05067 770 aa25.36■■□□□ 1.65
LIN54-208ENST00000509748 PTPREP23469 700 aa25.36■■□□□ 1.65
LIN54-208ENST00000509748 RGS2P41220 211 aa25.36■■□□□ 1.65
LIN54-208ENST00000509748 TDO2P48775 406 aa25.36■■□□□ 1.65
LIN54-208ENST00000509748 CCL14Q16627 93 aa25.36■■□□□ 1.65
LIN54-208ENST00000509748 MKNK2Q9HBH9 465 aa25.36■■□□□ 1.65
LIN54-208ENST00000509748 IGKV6D-41A0A0C4DH26 115 aa25.35■■□□□ 1.65
LIN54-208ENST00000509748 SLC15A5A6NIM6 579 aa25.35■■□□□ 1.65
LIN54-208ENST00000509748 CAPN2P17655 700 aa25.35■■□□□ 1.65
LIN54-208ENST00000509748 ATP2B2Q01814 1243 aa25.35■■□□□ 1.65
LIN54-208ENST00000509748 MAP2K5Q13163 448 aa25.35■■□□□ 1.65
LIN54-208ENST00000509748 EVI5LQ96CN4 794 aa25.35■■□□□ 1.65
LIN54-208ENST00000509748 MOV10L1Q9BXT6 1211 aaKnown RBP25.35■■□□□ 1.65
LIN54-208ENST00000509748 LNPKQ9C0E8 428 aa25.35■■□□□ 1.65
LIN54-208ENST00000509748 RWDD1Q9H446 243 aaPredicted RBP25.35■■□□□ 1.65
LIN54-208ENST00000509748 FLOT1O75955 427 aa25.34■■□□□ 1.65
LIN54-208ENST00000509748 FARP2O94887 1054 aaPredicted RBP25.34■■□□□ 1.65
LIN54-208ENST00000509748 TFRCP02786 760 aaKnown RBP25.34■■□□□ 1.65
LIN54-208ENST00000509748 CCDC129Q6ZRS4 1044 aa25.34■■□□□ 1.65
LIN54-208ENST00000509748 TRMT44Q8IYL2 757 aaKnown RBP25.34■■□□□ 1.65
LIN54-208ENST00000509748 ATG4CQ96DT6 458 aa25.34■■□□□ 1.65
LIN54-208ENST00000509748 APBA2Q99767 749 aa25.34■■□□□ 1.65
LIN54-208ENST00000509748 SPATC1LQ9H0A9 340 aa25.34■■□□□ 1.65
LIN54-208ENST00000509748 HMX1Q9NP08 348 aaPredicted RBP25.34■■□□□ 1.65
LIN54-208ENST00000509748 NYAP2Q9P242 653 aa25.34■■□□□ 1.65
LIN54-208ENST00000509748 ADAMTS5Q9UNA0 930 aa25.34■■□□□ 1.65
LIN54-208ENST00000509748 PRDM1O75626 825 aa25.33■■□□□ 1.65
LIN54-208ENST00000509748 PRKAR2AP13861 404 aaKnown RBP25.33■■□□□ 1.65
LIN54-208ENST00000509748 CACNB2Q08289 660 aaPredicted RBP25.33■■□□□ 1.65
LIN54-208ENST00000509748 GRB14Q14449 540 aa25.33■■□□□ 1.65
LIN54-208ENST00000509748 MB21D1Q8N884 522 aa25.33■■□□□ 1.65
LIN54-208ENST00000509748 IGHA2P01877 340 aa25.32■■□□□ 1.64
LIN54-208ENST00000509748 HOXC6P09630 235 aa25.32■■□□□ 1.64
LIN54-208ENST00000509748 ZKSCAN1P17029 563 aaPredicted RBP25.32■■□□□ 1.64
LIN54-208ENST00000509748 WDR78Q5VTH9 848 aa25.32■■□□□ 1.64
LIN54-208ENST00000509748 SHCBP1Q8NEM2 672 aa25.32■■□□□ 1.64
LIN54-208ENST00000509748 NACAP1Q9BZK3 213 aa25.32■■□□□ 1.64
LIN54-208ENST00000509748 FBXO28Q9NVF7 368 aa25.32■■□□□ 1.64
LIN54-208ENST00000509748 FLRT1Q9NZU1 646 aa25.32■■□□□ 1.64
LIN54-208ENST00000509748 B4GALNT3Q6L9W6 998 aa25.31■■□□□ 1.64
LIN54-208ENST00000509748 CWC22Q9HCG8 908 aaKnown RBP25.31■■□□□ 1.64
LIN54-208ENST00000509748 GOPCQ9HD26 462 aa25.31■■□□□ 1.64
LIN54-208ENST00000509748 ERCC3P19447 782 aa25.3■■□□□ 1.64
LIN54-208ENST00000509748 MNX1P50219 401 aaPredicted RBP25.3■■□□□ 1.64
LIN54-208ENST00000509748 PPARAQ07869 468 aa25.3■■□□□ 1.64
LIN54-208ENST00000509748 ZNF444Q8N0Y2 327 aaPredicted RBP25.3■■□□□ 1.64
LIN54-208ENST00000509748 NPLOC4Q8TAT6 608 aa25.3■■□□□ 1.64
LIN54-208ENST00000509748 MKL1Q969V6 931 aa25.3■■□□□ 1.64
LIN54-208ENST00000509748 NAPBQ9H115 298 aa25.3■■□□□ 1.64
LIN54-208ENST00000509748 SUPT16HQ9Y5B9 1047 aaKnown RBP25.3■■□□□ 1.64
LIN54-208ENST00000509748 COL11A1P12107 1806 aaPredicted RBP25.3■■□□□ 1.64
LIN54-208ENST00000509748 H0YGN5 161 aa25.29■■□□□ 1.64
LIN54-208ENST00000509748 NUCB1Q02818 461 aa25.29■■□□□ 1.64
LIN54-208ENST00000509748 TMEM132BQ14DG7 1078 aa25.29■■□□□ 1.64
LIN54-208ENST00000509748 FAM83BQ5T0W9 1011 aa25.29■■□□□ 1.64
LIN54-208ENST00000509748 VPS53Q5VIR6 699 aa25.29■■□□□ 1.64
LIN54-208ENST00000509748 CHD1LQ86WJ1 897 aa25.29■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 1384.9 ms