RNA–Protein interactions for RNA: ENST00000506632.2

PDLIM5-209, Transcript of PDZ and LIM domain 5, humanhuman

TSL 3

Gene PDLIM5, Length 907 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-209ENST00000506632 GJA8P48165 433 aa10.88□□□□□ -0.67
PDLIM5-209ENST00000506632 ICA1Q05084 483 aa10.88□□□□□ -0.67
PDLIM5-209ENST00000506632 LRRFIP1Q32MZ4 808 aaKnown RBP10.88□□□□□ -0.67
PDLIM5-209ENST00000506632 ZMYM1Q5SVZ6 1142 aa10.88□□□□□ -0.67
PDLIM5-209ENST00000506632 ANKRD45Q5TZF3 282 aa10.88□□□□□ -0.67
PDLIM5-209ENST00000506632 UBE2Q1Q7Z7E8 422 aa10.88□□□□□ -0.67
PDLIM5-209ENST00000506632 CLEC10AQ8IUN9 316 aa10.88□□□□□ -0.67
PDLIM5-209ENST00000506632 SMC5Q8IY18 1101 aa10.88□□□□□ -0.67
PDLIM5-209ENST00000506632 NKX2-3Q8TAU0 364 aa10.88□□□□□ -0.67
PDLIM5-209ENST00000506632 USP6NLQ92738 828 aa10.88□□□□□ -0.67
PDLIM5-209ENST00000506632 PAGR1Q9BTK6 254 aa10.88□□□□□ -0.67
PDLIM5-209ENST00000506632 UNC93B1Q9H1C4 597 aa10.88□□□□□ -0.67
PDLIM5-209ENST00000506632 PORCNQ9H237 461 aa10.88□□□□□ -0.67
PDLIM5-209ENST00000506632 BIN2Q9UBW5 565 aaPredicted RBP10.88□□□□□ -0.67
PDLIM5-209ENST00000506632 HMGCRP04035 888 aa10.87□□□□□ -0.67
PDLIM5-209ENST00000506632 XRCC5P13010 732 aaKnown RBP10.87□□□□□ -0.67
PDLIM5-209ENST00000506632 RASA1P20936 1047 aa10.87□□□□□ -0.67
PDLIM5-209ENST00000506632 PDE1AP54750 535 aa10.87□□□□□ -0.67
PDLIM5-209ENST00000506632 MORN1Q5T089 497 aa10.87□□□□□ -0.67
PDLIM5-209ENST00000506632 GPR142Q7Z601 462 aa10.87□□□□□ -0.67
PDLIM5-209ENST00000506632 SOCS4Q8WXH5 440 aa10.87□□□□□ -0.67
PDLIM5-209ENST00000506632 LPAR1Q92633 364 aa10.87□□□□□ -0.67
PDLIM5-209ENST00000506632 SEC62Q99442 399 aaKnown RBP10.87□□□□□ -0.67
PDLIM5-209ENST00000506632 FSD1Q9BTV5 496 aa10.87□□□□□ -0.67
PDLIM5-209ENST00000506632 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.87□□□□□ -0.67
PDLIM5-209ENST00000506632 RNF208Q9H0X6 261 aa10.87□□□□□ -0.67
PDLIM5-209ENST00000506632 VCPKMTQ9H867 229 aa10.87□□□□□ -0.67
PDLIM5-209ENST00000506632 ARHGEF10LQ9HCE6 1279 aa10.87□□□□□ -0.67
PDLIM5-209ENST00000506632 PAK6Q9NQU5 681 aaPredicted RBP10.87□□□□□ -0.67
PDLIM5-209ENST00000506632 BTBD7Q9P203 1132 aa10.87□□□□□ -0.67
PDLIM5-209ENST00000506632 PARP14Q460N5 1801 aa10.86□□□□□ -0.67
PDLIM5-209ENST00000506632 PATL2C9JE40 543 aaKnown RBP10.86□□□□□ -0.67
PDLIM5-209ENST00000506632 SGPL1O95470 568 aa10.86□□□□□ -0.67
PDLIM5-209ENST00000506632 EEF2P13639 858 aaKnown RBP10.86□□□□□ -0.67
PDLIM5-209ENST00000506632 COG2Q14746 738 aa10.86□□□□□ -0.67
PDLIM5-209ENST00000506632 PLEKHH3Q7Z736 793 aa10.86□□□□□ -0.67
PDLIM5-209ENST00000506632 IFNL3Q8IZI9 196 aa10.86□□□□□ -0.67
PDLIM5-209ENST00000506632 U2AF1L4Q8WU68 220 aaKnown RBP10.86□□□□□ -0.67
PDLIM5-209ENST00000506632 TRIB2Q92519 343 aa10.86□□□□□ -0.67
PDLIM5-209ENST00000506632 NUDT12Q9BQG2 462 aa10.86□□□□□ -0.67
PDLIM5-209ENST00000506632 SH2D4AQ9H788 454 aa10.86□□□□□ -0.67
PDLIM5-209ENST00000506632 KANSL2Q9H9L4 492 aa10.86□□□□□ -0.67
PDLIM5-209ENST00000506632 IGKV6D-41A0A0C4DH26 115 aa10.85□□□□□ -0.67
PDLIM5-209ENST00000506632 WDR46O15213 610 aaKnown RBP10.85□□□□□ -0.67
PDLIM5-209ENST00000506632 FOXP2O15409 715 aa10.85□□□□□ -0.67
PDLIM5-209ENST00000506632 IGHDP01880 384 aa10.85□□□□□ -0.67
PDLIM5-209ENST00000506632 CAPN2P17655 700 aa10.85□□□□□ -0.67
PDLIM5-209ENST00000506632 CCNA1P78396 465 aa10.85□□□□□ -0.67
PDLIM5-209ENST00000506632 TRIM32Q13049 653 aa10.85□□□□□ -0.67
PDLIM5-209ENST00000506632 MAP3K21Q5TCX8 1036 aa10.85□□□□□ -0.67
PDLIM5-209ENST00000506632 TICAM2Q86XR7 235 aa10.85□□□□□ -0.67
PDLIM5-209ENST00000506632 SPRYD3Q8NCJ5 442 aa10.85□□□□□ -0.67
PDLIM5-209ENST00000506632 EXOC6Q8TAG9 804 aa10.85□□□□□ -0.67
PDLIM5-209ENST00000506632 EVI5LQ96CN4 794 aa10.85□□□□□ -0.67
PDLIM5-209ENST00000506632 CRISPLD2Q9H0B8 497 aa10.85□□□□□ -0.67
PDLIM5-209ENST00000506632 HOXC10Q9NYD6 342 aa10.85□□□□□ -0.67
PDLIM5-209ENST00000506632 ZBTB47Q9UFB7 747 aaPredicted RBP10.85□□□□□ -0.67
PDLIM5-209ENST00000506632 CEP290O15078 2479 aa10.85□□□□□ -0.67
PDLIM5-209ENST00000506632 ZNF236Q9UL36 1845 aa10.84□□□□□ -0.67
PDLIM5-209ENST00000506632 MINDY4BA8MYZ0 360 aa10.84□□□□□ -0.67
PDLIM5-209ENST00000506632 CYP2B6P20813 491 aa10.84□□□□□ -0.67
PDLIM5-209ENST00000506632 DSG3P32926 999 aa10.84□□□□□ -0.67
PDLIM5-209ENST00000506632 RGS2P41220 211 aa10.84□□□□□ -0.67
PDLIM5-209ENST00000506632 TDO2P48775 406 aa10.84□□□□□ -0.67
PDLIM5-209ENST00000506632 TRMT44Q8IYL2 757 aaKnown RBP10.84□□□□□ -0.67
PDLIM5-209ENST00000506632 SPICE1Q8N0Z3 855 aa10.84□□□□□ -0.67
PDLIM5-209ENST00000506632 MB21D1Q8N884 522 aa10.84□□□□□ -0.67
PDLIM5-209ENST00000506632 APBA2Q99767 749 aa10.84□□□□□ -0.67
PDLIM5-209ENST00000506632 TANGO6Q9C0B7 1094 aa10.84□□□□□ -0.67
PDLIM5-209ENST00000506632 LNPKQ9C0E8 428 aa10.84□□□□□ -0.67
PDLIM5-209ENST00000506632 XRN2Q9H0D6 950 aaKnown RBP eCLIP10.84□□□□□ -0.67
PDLIM5-209ENST00000506632 RWDD1Q9H446 243 aaPredicted RBP10.84□□□□□ -0.67
PDLIM5-209ENST00000506632 NYAP2Q9P242 653 aa10.84□□□□□ -0.67
PDLIM5-209ENST00000506632 ADAMTS5Q9UNA0 930 aa10.84□□□□□ -0.67
PDLIM5-209ENST00000506632 PLIN4Q96Q06 1357 aa10.84□□□□□ -0.67
PDLIM5-209ENST00000506632 MKI67P46013 3256 aaKnown RBP10.84□□□□□ -0.67
PDLIM5-209ENST00000506632 RPTORQ8N122 1335 aa10.84□□□□□ -0.67
PDLIM5-209ENST00000506632 SLC15A5A6NIM6 579 aa10.83□□□□□ -0.68
PDLIM5-209ENST00000506632 FLOT1O75955 427 aa10.83□□□□□ -0.68
PDLIM5-209ENST00000506632 IGHA2P01877 340 aa10.83□□□□□ -0.68
PDLIM5-209ENST00000506632 APPP05067 770 aa10.83□□□□□ -0.68
PDLIM5-209ENST00000506632 HOXC6P09630 235 aa10.83□□□□□ -0.68
PDLIM5-209ENST00000506632 PTPREP23469 700 aa10.83□□□□□ -0.68
PDLIM5-209ENST00000506632 MAP2K5Q13163 448 aa10.83□□□□□ -0.68
PDLIM5-209ENST00000506632 GRB14Q14449 540 aa10.83□□□□□ -0.68
PDLIM5-209ENST00000506632 CCL14Q16627 93 aa10.83□□□□□ -0.68
PDLIM5-209ENST00000506632 CCDC129Q6ZRS4 1044 aa10.83□□□□□ -0.68
PDLIM5-209ENST00000506632 CCAR1Q8IX12 1150 aaKnown RBP10.83□□□□□ -0.68
PDLIM5-209ENST00000506632 SHCBP1Q8NEM2 672 aa10.83□□□□□ -0.68
PDLIM5-209ENST00000506632 ATG4CQ96DT6 458 aa10.83□□□□□ -0.68
PDLIM5-209ENST00000506632 DEFB118Q96PH6 123 aa10.83□□□□□ -0.68
PDLIM5-209ENST00000506632 MOV10L1Q9BXT6 1211 aaKnown RBP10.83□□□□□ -0.68
PDLIM5-209ENST00000506632 NACAP1Q9BZK3 213 aa10.83□□□□□ -0.68
PDLIM5-209ENST00000506632 SPATC1LQ9H0A9 340 aa10.83□□□□□ -0.68
PDLIM5-209ENST00000506632 OSBPL3Q9H4L5 887 aa10.83□□□□□ -0.68
PDLIM5-209ENST00000506632 MKNK2Q9HBH9 465 aa10.83□□□□□ -0.68
PDLIM5-209ENST00000506632 TSHZ2Q9NRE2 1034 aa10.83□□□□□ -0.68
PDLIM5-209ENST00000506632 PRDM1O75626 825 aa10.82□□□□□ -0.68
PDLIM5-209ENST00000506632 FARP2O94887 1054 aaPredicted RBP10.82□□□□□ -0.68
PDLIM5-209ENST00000506632 PRKAR2AP13861 404 aaKnown RBP10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 68.8 ms