RNA–Protein interactions for RNA: ENST00000506080.5

PTPN20-216, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN20, Length 1,401 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-216ENST00000506080 FLT1P17948 1338 aa11.3□□□□□ -0.6
PTPN20-216ENST00000506080 BAG3O95817 575 aa11.29□□□□□ -0.6
PTPN20-216ENST00000506080 CNGA1P29973 690 aa11.29□□□□□ -0.6
PTPN20-216ENST00000506080 MAP2K5Q13163 448 aa11.29□□□□□ -0.6
PTPN20-216ENST00000506080 GTF3C2Q8WUA4 911 aaPredicted RBP11.29□□□□□ -0.6
PTPN20-216ENST00000506080 EDC3Q96F86 508 aaKnown RBP11.29□□□□□ -0.6
PTPN20-216ENST00000506080 CNMDO75829 334 aa11.28□□□□□ -0.6
PTPN20-216ENST00000506080 GNAI3P08754 354 aa11.28□□□□□ -0.6
PTPN20-216ENST00000506080 ZNF697Q5TEC3 545 aa11.28□□□□□ -0.6
PTPN20-216ENST00000506080 MFSD14CQ5VZR4 134 aa11.28□□□□□ -0.6
PTPN20-216ENST00000506080 FAM109BQ6ICB4 259 aaPredicted RBP11.28□□□□□ -0.6
PTPN20-216ENST00000506080 USP17L2Q6R6M4 530 aa11.28□□□□□ -0.6
PTPN20-216ENST00000506080 ADGRA1Q86SQ6 560 aa11.28□□□□□ -0.6
PTPN20-216ENST00000506080 FOXP4Q8IVH2 680 aaPredicted RBP11.28□□□□□ -0.6
PTPN20-216ENST00000506080 DDX20Q9UHI6 824 aaKnown RBP11.28□□□□□ -0.6
PTPN20-216ENST00000506080 GH2P01242 217 aa11.27□□□□□ -0.6
PTPN20-216ENST00000506080 UQCRFS1P1P0C7P4 283 aa11.27□□□□□ -0.6
PTPN20-216ENST00000506080 RTP1P59025 263 aa11.27□□□□□ -0.6
PTPN20-216ENST00000506080 PPP4CP60510 307 aa11.27□□□□□ -0.6
PTPN20-216ENST00000506080 G3BP1Q13283 466 aaKnown RBP eCLIP11.27□□□□□ -0.6
PTPN20-216ENST00000506080 MTX1Q13505 466 aa11.27□□□□□ -0.6
PTPN20-216ENST00000506080 TTC39AQ5SRH9 613 aa11.27□□□□□ -0.6
PTPN20-216ENST00000506080 METTL16Q86W50 562 aaKnown RBP11.27□□□□□ -0.6
PTPN20-216ENST00000506080 BBXQ8WY36 941 aaPredicted RBP11.27□□□□□ -0.6
PTPN20-216ENST00000506080 FEZ1Q99689 392 aa11.27□□□□□ -0.6
PTPN20-216ENST00000506080 GINM1Q9NU53 330 aa11.27□□□□□ -0.6
PTPN20-216ENST00000506080 PRKAG2Q9UGJ0 569 aa11.27□□□□□ -0.6
PTPN20-216ENST00000506080 ATP11BQ9Y2G3 1177 aa11.27□□□□□ -0.6
PTPN20-216ENST00000506080 RABGAP1Q9Y3P9 1069 aa11.27□□□□□ -0.6
PTPN20-216ENST00000506080 FRMPD3Q5JV73 1810 aa11.27□□□□□ -0.61
PTPN20-216ENST00000506080 USP17L15C9J2P7 530 aa11.26□□□□□ -0.61
PTPN20-216ENST00000506080 USP17L13C9JLJ4 530 aa11.26□□□□□ -0.61
PTPN20-216ENST00000506080 USP17L11C9JVI0 530 aa11.26□□□□□ -0.61
PTPN20-216ENST00000506080 USP17L18D6R9N7 530 aa11.26□□□□□ -0.61
PTPN20-216ENST00000506080 USP17L22D6RA61 530 aa11.26□□□□□ -0.61
PTPN20-216ENST00000506080 USP17L17D6RBQ6 530 aa11.26□□□□□ -0.61
PTPN20-216ENST00000506080 USP17L19D6RCP7 530 aa11.26□□□□□ -0.61
PTPN20-216ENST00000506080 USP17L20D6RJB6 530 aa11.26□□□□□ -0.61
PTPN20-216ENST00000506080 TK2O00142 265 aa11.26□□□□□ -0.61
PTPN20-216ENST00000506080 GLRX3O76003 335 aaKnown RBP11.26□□□□□ -0.61
PTPN20-216ENST00000506080 HLA-DOAP06340 250 aa11.26□□□□□ -0.61
PTPN20-216ENST00000506080 PTPREP23469 700 aa11.26□□□□□ -0.61
PTPN20-216ENST00000506080 CYP2C19P33261 490 aa11.26□□□□□ -0.61
PTPN20-216ENST00000506080 FOSBP53539 338 aa11.26□□□□□ -0.61
PTPN20-216ENST00000506080 DYNLL1P63167 89 aaKnown RBP11.26□□□□□ -0.61
PTPN20-216ENST00000506080 CCNA1P78396 465 aa11.26□□□□□ -0.61
PTPN20-216ENST00000506080 ATP2B2Q01814 1243 aa11.26□□□□□ -0.61
PTPN20-216ENST00000506080 USP17L24Q0WX57 530 aa11.26□□□□□ -0.61
PTPN20-216ENST00000506080 NPLOC4Q8TAT6 608 aa11.26□□□□□ -0.61
PTPN20-216ENST00000506080 LPAR1Q92633 364 aa11.26□□□□□ -0.61
PTPN20-216ENST00000506080 RTN4Q9NQC3 1192 aaKnown RBP11.26□□□□□ -0.61
PTPN20-216ENST00000506080 MAST2Q6P0Q8 1798 aa11.26□□□□□ -0.61
PTPN20-216ENST00000506080 PNMA6EA0A0J9YXQ4 647 aa11.26□□□□□ -0.61
PTPN20-216ENST00000506080 SLC15A5A6NIM6 579 aa11.26□□□□□ -0.61
PTPN20-216ENST00000506080 HRO43593 1189 aa11.26□□□□□ -0.61
PTPN20-216ENST00000506080 CYP2E1P05181 493 aaPredicted RBP11.26□□□□□ -0.61
PTPN20-216ENST00000506080 SHHQ15465 462 aa11.26□□□□□ -0.61
PTPN20-216ENST00000506080 GJC2Q5T442 439 aaPredicted RBP11.26□□□□□ -0.61
PTPN20-216ENST00000506080 CATSPERGQ6ZRH7 1159 aa11.26□□□□□ -0.61
PTPN20-216ENST00000506080 TRPV1Q8NER1 839 aa11.26□□□□□ -0.61
PTPN20-216ENST00000506080 C12orf42Q96LP6 360 aa11.26□□□□□ -0.61
PTPN20-216ENST00000506080 CDX2Q99626 313 aaPredicted RBP11.26□□□□□ -0.61
PTPN20-216ENST00000506080 PRDM5Q9NQX1 630 aaPredicted RBP11.26□□□□□ -0.61
PTPN20-216ENST00000506080 BTBD7Q9P203 1132 aa11.26□□□□□ -0.61
PTPN20-216ENST00000506080 IVNS1ABPQ9Y6Y0 642 aa11.26□□□□□ -0.61
PTPN20-216ENST00000506080 CDK5RAP2Q96SN8 1893 aa11.25□□□□□ -0.61
PTPN20-216ENST00000506080 DNM1LO00429 736 aa11.25□□□□□ -0.61
PTPN20-216ENST00000506080 MSCO60682 206 aa11.25□□□□□ -0.61
PTPN20-216ENST00000506080 ZAP70P43403 619 aa11.25□□□□□ -0.61
PTPN20-216ENST00000506080 RAB3GAP1Q15042 981 aa11.25□□□□□ -0.61
PTPN20-216ENST00000506080 CCDC158Q5M9N0 1113 aa11.25□□□□□ -0.61
PTPN20-216ENST00000506080 C9orf50Q5SZB4 431 aa11.25□□□□□ -0.61
PTPN20-216ENST00000506080 ANO1Q5XXA6 986 aa11.25□□□□□ -0.61
PTPN20-216ENST00000506080 ATF7IPQ6VMQ6 1270 aa11.25□□□□□ -0.61
PTPN20-216ENST00000506080 TRMT2AQ8IZ69 625 aaKnown RBP11.25□□□□□ -0.61
PTPN20-216ENST00000506080 MAFAQ8NHW3 353 aaPredicted RBP11.25□□□□□ -0.61
PTPN20-216ENST00000506080 ACER1Q8TDN7 264 aa11.25□□□□□ -0.61
PTPN20-216ENST00000506080 DBNDD2Q9BQY9 259 aa11.25□□□□□ -0.61
PTPN20-216ENST00000506080 SEMA6BQ9H3T3 888 aa11.25□□□□□ -0.61
PTPN20-216ENST00000506080 DNAH12Q6ZR08 3092 aa11.24□□□□□ -0.61
PTPN20-216ENST00000506080 GNAI2P04899 355 aa11.24□□□□□ -0.61
PTPN20-216ENST00000506080 HOXC6P09630 235 aa11.24□□□□□ -0.61
PTPN20-216ENST00000506080 CYBAP13498 195 aa11.24□□□□□ -0.61
PTPN20-216ENST00000506080 VCAM1P19320 739 aa11.24□□□□□ -0.61
PTPN20-216ENST00000506080 CYP7A1P22680 504 aa11.24□□□□□ -0.61
PTPN20-216ENST00000506080 USP5P45974 858 aa11.24□□□□□ -0.61
PTPN20-216ENST00000506080 USP14P54578 494 aa11.24□□□□□ -0.61
PTPN20-216ENST00000506080 GRB14Q14449 540 aa11.24□□□□□ -0.61
PTPN20-216ENST00000506080 SLC39A5Q6ZMH5 540 aa11.24□□□□□ -0.61
PTPN20-216ENST00000506080 MYLIPQ8WY64 445 aa11.24□□□□□ -0.61
PTPN20-216ENST00000506080 BADQ92934 168 aa11.24□□□□□ -0.61
PTPN20-216ENST00000506080 PIH1D3Q9NQM4 214 aaKnown RBP11.24□□□□□ -0.61
PTPN20-216ENST00000506080 TNNQ9UQP3 1299 aa11.24□□□□□ -0.61
PTPN20-216ENST00000506080 LAMA2P24043 3122 aaKnown RBP11.24□□□□□ -0.61
PTPN20-216ENST00000506080 FOCADQ5VW36 1801 aa11.23□□□□□ -0.61
PTPN20-216ENST00000506080 SPDYE16A6NNV3 312 aaPredicted RBP11.23□□□□□ -0.61
PTPN20-216ENST00000506080 KBTBD13C9JR72 458 aa11.23□□□□□ -0.61
PTPN20-216ENST00000506080 CT47B1P0C2W7 299 aaPredicted RBP11.23□□□□□ -0.61
PTPN20-216ENST00000506080 RARSP54136 660 aaKnown RBP11.23□□□□□ -0.61
PTPN20-216ENST00000506080 TRIM60Q495X7 471 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms