RNA–Protein interactions for RNA: ENST00000504387.5

NEDD9-208, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene NEDD9, Length 3,211 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-208ENST00000504387 EIF4E1BA6NMX2 242 aaKnown RBP8.58□□□□□ -1.04
NEDD9-208ENST00000504387 POTEB2H3BUK9 544 aa8.58□□□□□ -1.04
NEDD9-208ENST00000504387 SKAP2O75563 359 aaPredicted RBP8.58□□□□□ -1.04
NEDD9-208ENST00000504387 MORC3Q14149 939 aa8.58□□□□□ -1.04
NEDD9-208ENST00000504387 TSR1Q2NL82 804 aaKnown RBP8.58□□□□□ -1.04
NEDD9-208ENST00000504387 RASGRP2Q7LDG7 609 aa8.58□□□□□ -1.04
NEDD9-208ENST00000504387 SYMPKQ92797 1274 aaKnown RBP8.58□□□□□ -1.04
NEDD9-208ENST00000504387 SCLT1Q96NL6 688 aa8.58□□□□□ -1.04
NEDD9-208ENST00000504387 LRRC1Q9BTT6 524 aa8.58□□□□□ -1.04
NEDD9-208ENST00000504387 DACH1Q9UI36 760 aa8.58□□□□□ -1.04
NEDD9-208ENST00000504387 SUFUQ9UMX1 484 aa8.58□□□□□ -1.04
NEDD9-208ENST00000504387 EPB41L3Q9Y2J2 1087 aaPredicted RBP8.58□□□□□ -1.04
NEDD9-208ENST00000504387 CEMIPQ8WUJ3 1361 aa8.57□□□□□ -1.04
NEDD9-208ENST00000504387 TTC26A0AVF1 554 aa8.57□□□□□ -1.04
NEDD9-208ENST00000504387 MINDY4BA8MYZ0 360 aa8.57□□□□□ -1.04
NEDD9-208ENST00000504387 AGPSO00116 658 aa8.57□□□□□ -1.04
NEDD9-208ENST00000504387 TULP1O00294 542 aaPredicted RBP8.57□□□□□ -1.04
NEDD9-208ENST00000504387 NCK2O43639 380 aa8.57□□□□□ -1.04
NEDD9-208ENST00000504387 PPP6R2O75170 966 aa8.57□□□□□ -1.04
NEDD9-208ENST00000504387 KIAA0754O94854 1291 aa8.57□□□□□ -1.04
NEDD9-208ENST00000504387 USP5P45974 858 aa8.57□□□□□ -1.04
NEDD9-208ENST00000504387 USP14P54578 494 aa8.57□□□□□ -1.04
NEDD9-208ENST00000504387 EIF5P55010 431 aaKnown RBP8.57□□□□□ -1.04
NEDD9-208ENST00000504387 IFIT5Q13325 482 aaKnown RBP8.57□□□□□ -1.04
NEDD9-208ENST00000504387 COG1Q8WTW3 980 aa8.57□□□□□ -1.04
NEDD9-208ENST00000504387 PANX2Q96RD6 677 aa8.57□□□□□ -1.04
NEDD9-208ENST00000504387 MED4Q9NPJ6 270 aa8.57□□□□□ -1.04
NEDD9-208ENST00000504387 PPANQ9NQ55 473 aaKnown RBP8.57□□□□□ -1.04
NEDD9-208ENST00000504387 AGPAT5Q9NUQ2 364 aa8.57□□□□□ -1.04
NEDD9-208ENST00000504387 ZSWIM5Q9P217 1185 aa8.57□□□□□ -1.04
NEDD9-208ENST00000504387 FER1L4A9Z1Z3 1794 aa8.57□□□□□ -1.04
NEDD9-208ENST00000504387 PXDNLA1KZ92 1463 aa8.57□□□□□ -1.04
NEDD9-208ENST00000504387 EYA2O00167 538 aa8.57□□□□□ -1.04
NEDD9-208ENST00000504387 PRKAB2O43741 272 aa8.57□□□□□ -1.04
NEDD9-208ENST00000504387 PRPF6O94906 941 aaKnown RBP8.57□□□□□ -1.04
NEDD9-208ENST00000504387 SPATA1Q5VX52 437 aa8.57□□□□□ -1.04
NEDD9-208ENST00000504387 GBP6Q6ZN66 633 aa8.57□□□□□ -1.04
NEDD9-208ENST00000504387 CNGA4Q8IV77 575 aa8.57□□□□□ -1.04
NEDD9-208ENST00000504387 MIGA1Q8NAN2 632 aa8.57□□□□□ -1.04
NEDD9-208ENST00000504387 FBXO2Q9UK22 296 aaPredicted RBP8.57□□□□□ -1.04
NEDD9-208ENST00000504387 TTF2Q9UNY4 1162 aaKnown RBP8.57□□□□□ -1.04
NEDD9-208ENST00000504387 TBC1D2BQ9UPU7 963 aa8.57□□□□□ -1.04
NEDD9-208ENST00000504387 REXO2Q9Y3B8 237 aaKnown RBP8.57□□□□□ -1.04
NEDD9-208ENST00000504387 TECPR2O15040 1411 aa8.56□□□□□ -1.04
NEDD9-208ENST00000504387 NDUFA10O95299 355 aa8.56□□□□□ -1.04
NEDD9-208ENST00000504387 PLEKP08567 350 aaPredicted RBP8.56□□□□□ -1.04
NEDD9-208ENST00000504387 IFT88Q13099 833 aa8.56□□□□□ -1.04
NEDD9-208ENST00000504387 WHAMMP3Q1A5X7 153 aa8.56□□□□□ -1.04
NEDD9-208ENST00000504387 CCDC96Q2M329 555 aa8.56□□□□□ -1.04
NEDD9-208ENST00000504387 GIMAP7Q8NHV1 300 aa8.56□□□□□ -1.04
NEDD9-208ENST00000504387 BRMS1Q9HCU9 246 aa8.56□□□□□ -1.04
NEDD9-208ENST00000504387 ABCF2Q9UG63 623 aa8.56□□□□□ -1.04
NEDD9-208ENST00000504387 FAM208AQ9UK61 1670 aaKnown RBP8.56□□□□□ -1.04
NEDD9-208ENST00000504387 ZMYM6O95789 1325 aa8.56□□□□□ -1.04
NEDD9-208ENST00000504387 IL15P40933 162 aaPredicted RBP8.56□□□□□ -1.04
NEDD9-208ENST00000504387 SETQ01105 290 aaPredicted RBP8.56□□□□□ -1.04
NEDD9-208ENST00000504387 CUL4BQ13620 913 aa8.56□□□□□ -1.04
NEDD9-208ENST00000504387 CYP26C1Q6V0L0 522 aa8.56□□□□□ -1.04
NEDD9-208ENST00000504387 TSEN2Q8NCE0 465 aaKnown RBP8.56□□□□□ -1.04
NEDD9-208ENST00000504387 PLBD2Q8NHP8 589 aa8.56□□□□□ -1.04
NEDD9-208ENST00000504387 PAGE5Q96GU1 130 aa8.56□□□□□ -1.04
NEDD9-208ENST00000504387 MS4A14Q96JA4 679 aa8.56□□□□□ -1.04
NEDD9-208ENST00000504387 MLXIPQ9HAP2 919 aa8.56□□□□□ -1.04
NEDD9-208ENST00000504387 SLC4A4Q9Y6R1 1079 aa8.56□□□□□ -1.04
NEDD9-208ENST00000504387 NBPF26B4DH59 902 aa8.56□□□□□ -1.04
NEDD9-208ENST00000504387 ACTN4O43707 911 aaKnown RBP8.56□□□□□ -1.04
NEDD9-208ENST00000504387 CDKL5O76039 1030 aa8.56□□□□□ -1.04
NEDD9-208ENST00000504387 TRIM21P19474 475 aaKnown RBP8.56□□□□□ -1.04
NEDD9-208ENST00000504387 MCM7P33993 719 aa8.56□□□□□ -1.04
NEDD9-208ENST00000504387 RDXP35241 583 aaKnown RBP8.56□□□□□ -1.04
NEDD9-208ENST00000504387 ATP6V1AP38606 617 aa8.56□□□□□ -1.04
NEDD9-208ENST00000504387 NBPF14Q5TI25 921 aa8.56□□□□□ -1.04
NEDD9-208ENST00000504387 NBPF10Q6P3W6 841 aaKnown RBP8.56□□□□□ -1.04
NEDD9-208ENST00000504387 APTXQ7Z2E3 356 aaKnown RBP8.56□□□□□ -1.04
NEDD9-208ENST00000504387 NBPF15Q8N660 670 aa8.56□□□□□ -1.04
NEDD9-208ENST00000504387 NOC3LQ8WTT2 800 aaKnown RBP8.56□□□□□ -1.04
NEDD9-208ENST00000504387 UBAC1Q9BSL1 405 aa8.56□□□□□ -1.04
NEDD9-208ENST00000504387 KCNJ18B7U540 433 aa8.55□□□□□ -1.04
NEDD9-208ENST00000504387 BUB1O43683 1085 aa8.55□□□□□ -1.04
NEDD9-208ENST00000504387 PTPREP23469 700 aa8.55□□□□□ -1.04
NEDD9-208ENST00000504387 CDC25CP30307 473 aa8.55□□□□□ -1.04
NEDD9-208ENST00000504387 COPB1P53618 953 aaKnown RBP8.55□□□□□ -1.04
NEDD9-208ENST00000504387 KCNJ12Q14500 433 aa8.55□□□□□ -1.04
NEDD9-208ENST00000504387 PPP2R5AQ15172 486 aa8.55□□□□□ -1.04
NEDD9-208ENST00000504387 TMTC1Q8IUR5 882 aa8.55□□□□□ -1.04
NEDD9-208ENST00000504387 TRIM22Q8IYM9 498 aa8.55□□□□□ -1.04
NEDD9-208ENST00000504387 NELFBQ8WX92 580 aa8.55□□□□□ -1.04
NEDD9-208ENST00000504387 DCAF5Q96JK2 942 aa8.55□□□□□ -1.04
NEDD9-208ENST00000504387 YY1AP1Q9H869 796 aa8.55□□□□□ -1.04
NEDD9-208ENST00000504387 ARMT1Q9H993 441 aa8.55□□□□□ -1.04
NEDD9-208ENST00000504387 FAM217BQ9NTX9 383 aaPredicted RBP8.55□□□□□ -1.04
NEDD9-208ENST00000504387 B4DLN1 442 aa8.55□□□□□ -1.04
NEDD9-208ENST00000504387 HGSO14964 777 aaPredicted RBP8.55□□□□□ -1.04
NEDD9-208ENST00000504387 IPO7O95373 1038 aaKnown RBP8.55□□□□□ -1.04
NEDD9-208ENST00000504387 FOXO4P98177 505 aa8.55□□□□□ -1.04
NEDD9-208ENST00000504387 TRADDQ15628 312 aa8.55□□□□□ -1.04
NEDD9-208ENST00000504387 CCDC181Q5TID7 509 aa8.55□□□□□ -1.04
NEDD9-208ENST00000504387 NFRKBQ6P4R8 1299 aa8.55□□□□□ -1.04
NEDD9-208ENST00000504387 KIF6Q6ZMV9 814 aa8.55□□□□□ -1.04
NEDD9-208ENST00000504387 TMC4Q7Z404 712 aa8.55□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms