RNA–Protein interactions for RNA: ENST00000503464.1

TOPBP1-203, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 2

Gene TOPBP1, Length 525 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-203ENST00000503464 PARP14Q460N5 1801 aa8.04□□□□□ -1.12
TOPBP1-203ENST00000503464 CPLX1O14810 134 aa8.04□□□□□ -1.12
TOPBP1-203ENST00000503464 DHX16O60231 1041 aaKnown RBP8.04□□□□□ -1.12
TOPBP1-203ENST00000503464 GDF11O95390 407 aa8.04□□□□□ -1.12
TOPBP1-203ENST00000503464 CALM1P0DP23 149 aa8.04□□□□□ -1.12
TOPBP1-203ENST00000503464 CALM2P0DP24 149 aa8.04□□□□□ -1.12
TOPBP1-203ENST00000503464 CALM3P0DP25 149 aa8.04□□□□□ -1.12
TOPBP1-203ENST00000503464 TOP1P11387 765 aaKnown RBP8.04□□□□□ -1.12
TOPBP1-203ENST00000503464 VEGFAP15692 232 aaPredicted RBP8.04□□□□□ -1.12
TOPBP1-203ENST00000503464 GUCY1B3Q02153 619 aa8.04□□□□□ -1.12
TOPBP1-203ENST00000503464 NBR1Q14596 966 aa8.04□□□□□ -1.12
TOPBP1-203ENST00000503464 RASA3Q14644 834 aa8.04□□□□□ -1.12
TOPBP1-203ENST00000503464 PKN1Q16512 942 aa8.04□□□□□ -1.12
TOPBP1-203ENST00000503464 CERKLQ49MI3 558 aaPredicted RBP8.04□□□□□ -1.12
TOPBP1-203ENST00000503464 FAM173BQ6P4H8 233 aa8.04□□□□□ -1.12
TOPBP1-203ENST00000503464 FERMT3Q86UX7 667 aa8.04□□□□□ -1.12
TOPBP1-203ENST00000503464 LRRC47Q8N1G4 583 aaKnown RBP8.04□□□□□ -1.12
TOPBP1-203ENST00000503464 STAG2Q8N3U4 1231 aa8.04□□□□□ -1.12
TOPBP1-203ENST00000503464 SRBD1Q8N5C6 995 aaKnown RBP8.04□□□□□ -1.12
TOPBP1-203ENST00000503464 CCDC17Q96LX7 622 aa8.04□□□□□ -1.12
TOPBP1-203ENST00000503464 MAP3K14Q99558 947 aa8.04□□□□□ -1.12
TOPBP1-203ENST00000503464 SLC26A6Q9BXS9 759 aa8.04□□□□□ -1.12
TOPBP1-203ENST00000503464 KAT14Q9H8E8 782 aa8.04□□□□□ -1.12
TOPBP1-203ENST00000503464 FRMD4AQ9P2Q2 1039 aaPredicted RBP8.04□□□□□ -1.12
TOPBP1-203ENST00000503464 HERC5Q9UII4 1024 aaKnown RBP8.04□□□□□ -1.12
TOPBP1-203ENST00000503464 TAOK2Q9UL54 1235 aa8.04□□□□□ -1.12
TOPBP1-203ENST00000503464 STX8Q9UNK0 236 aa8.04□□□□□ -1.12
TOPBP1-203ENST00000503464 hCG_1642624A0A1W2PR95 340 aa8.03□□□□□ -1.12
TOPBP1-203ENST00000503464 PALM3A6NDB9 673 aaPredicted RBP8.03□□□□□ -1.12
TOPBP1-203ENST00000503464 USP17L5A8MUK1 530 aa8.03□□□□□ -1.12
TOPBP1-203ENST00000503464 PHF20L1A8MW92 1017 aa8.03□□□□□ -1.12
TOPBP1-203ENST00000503464 KIF28PB7ZC32 967 aa8.03□□□□□ -1.12
TOPBP1-203ENST00000503464 CYTH3O43739 400 aa8.03□□□□□ -1.12
TOPBP1-203ENST00000503464 MYO1BO43795 1136 aa8.03□□□□□ -1.12
TOPBP1-203ENST00000503464 TBC1D12O60347 775 aa8.03□□□□□ -1.12
TOPBP1-203ENST00000503464 CDKL5O76039 1030 aa8.03□□□□□ -1.12
TOPBP1-203ENST00000503464 SNHG28P0DPA3 235 aa8.03□□□□□ -1.12
TOPBP1-203ENST00000503464 PDCP20941 246 aa8.03□□□□□ -1.12
TOPBP1-203ENST00000503464 SEPT2Q15019 361 aa8.03□□□□□ -1.12
TOPBP1-203ENST00000503464 CCDC178Q5BJE1 867 aa8.03□□□□□ -1.12
TOPBP1-203ENST00000503464 ANGEL2Q5VTE6 544 aaKnown RBP8.03□□□□□ -1.12
TOPBP1-203ENST00000503464 SYNE3Q6ZMZ3 975 aa8.03□□□□□ -1.12
TOPBP1-203ENST00000503464 CCDC82Q8N4S0 544 aa8.03□□□□□ -1.12
TOPBP1-203ENST00000503464 FBXO18Q8NFZ0 1043 aa8.03□□□□□ -1.12
TOPBP1-203ENST00000503464 CHMP4CQ96CF2 233 aa8.03□□□□□ -1.12
TOPBP1-203ENST00000503464 ALG1Q9BT22 464 aa8.03□□□□□ -1.12
TOPBP1-203ENST00000503464 RBM28Q9NW13 759 aaKnown RBP8.03□□□□□ -1.12
TOPBP1-203ENST00000503464 GGA3Q9NZ52 723 aa8.03□□□□□ -1.12
TOPBP1-203ENST00000503464 PTPRFP10586 1907 aa8.03□□□□□ -1.12
TOPBP1-203ENST00000503464 CCDC196A0A1B0GTZ2 297 aa8.02□□□□□ -1.13
TOPBP1-203ENST00000503464 A0A1W2PRG0 241 aa8.02□□□□□ -1.13
TOPBP1-203ENST00000503464 H7C1D1 291 aa8.02□□□□□ -1.13
TOPBP1-203ENST00000503464 MPHOSPH10O00566 681 aaKnown RBP8.02□□□□□ -1.13
TOPBP1-203ENST00000503464 PRPF3O43395 683 aaKnown RBP8.02□□□□□ -1.13
TOPBP1-203ENST00000503464 TTLL1O95922 423 aa8.02□□□□□ -1.13
TOPBP1-203ENST00000503464 GH2P01242 217 aa8.02□□□□□ -1.13
TOPBP1-203ENST00000503464 GOLGA8HP0CJ92 632 aa8.02□□□□□ -1.13
TOPBP1-203ENST00000503464 PDHBP11177 359 aa8.02□□□□□ -1.13
TOPBP1-203ENST00000503464 EEF2P13639 858 aaKnown RBP8.02□□□□□ -1.13
TOPBP1-203ENST00000503464 SSRP1Q08945 709 aaKnown RBP8.02□□□□□ -1.13
TOPBP1-203ENST00000503464 PPP2R5BQ15173 497 aa8.02□□□□□ -1.13
TOPBP1-203ENST00000503464 NPY5RQ15761 445 aa8.02□□□□□ -1.13
TOPBP1-203ENST00000503464 GPR162Q16538 588 aa8.02□□□□□ -1.13
TOPBP1-203ENST00000503464 ABCB5Q2M3G0 1257 aa8.02□□□□□ -1.13
TOPBP1-203ENST00000503464 FOXD4L6Q3SYB3 417 aaPredicted RBP8.02□□□□□ -1.13
TOPBP1-203ENST00000503464 NBPF12Q5TAG4 269 aaPredicted RBP8.02□□□□□ -1.13
TOPBP1-203ENST00000503464 KRT40Q6A162 431 aa8.02□□□□□ -1.13
TOPBP1-203ENST00000503464 USP17L2Q6R6M4 530 aa8.02□□□□□ -1.13
TOPBP1-203ENST00000503464 DLK2Q6UY11 383 aa8.02□□□□□ -1.13
TOPBP1-203ENST00000503464 FOXD4L3Q6VB84 417 aaPredicted RBP8.02□□□□□ -1.13
TOPBP1-203ENST00000503464 TMEM179Q6ZVK1 233 aa8.02□□□□□ -1.13
TOPBP1-203ENST00000503464 MIGA2Q7L4E1 593 aa8.02□□□□□ -1.13
TOPBP1-203ENST00000503464 FAM184AQ8NB25 1140 aa8.02□□□□□ -1.13
TOPBP1-203ENST00000503464 CTCFLQ8NI51 663 aaPredicted RBP8.02□□□□□ -1.13
TOPBP1-203ENST00000503464 MKL1Q969V6 931 aa8.02□□□□□ -1.13
TOPBP1-203ENST00000503464 L3MBTL3Q96JM7 780 aaPredicted RBP8.02□□□□□ -1.13
TOPBP1-203ENST00000503464 C8orf76Q96K31 380 aa8.02□□□□□ -1.13
TOPBP1-203ENST00000503464 GBP4Q96PP9 640 aa8.02□□□□□ -1.13
TOPBP1-203ENST00000503464 RNF26Q9BY78 433 aaPredicted RBP8.02□□□□□ -1.13
TOPBP1-203ENST00000503464 CPVLQ9H3G5 476 aa8.02□□□□□ -1.13
TOPBP1-203ENST00000503464 XPO5Q9HAV4 1204 aaKnown RBP eCLIP8.02□□□□□ -1.13
TOPBP1-203ENST00000503464 LMBRD1Q9NUN5 540 aa8.02□□□□□ -1.13
TOPBP1-203ENST00000503464 CLIP2Q9UDT6 1046 aa8.02□□□□□ -1.13
TOPBP1-203ENST00000503464 ZBTB21Q9ULJ3 1066 aa8.02□□□□□ -1.13
TOPBP1-203ENST00000503464 CNPY2Q9Y2B0 182 aa8.02□□□□□ -1.13
TOPBP1-203ENST00000503464 POTECB2RU33 542 aa8.01□□□□□ -1.13
TOPBP1-203ENST00000503464 POTEB2H3BUK9 544 aa8.01□□□□□ -1.13
TOPBP1-203ENST00000503464 ADAMTS3O15072 1205 aa8.01□□□□□ -1.13
TOPBP1-203ENST00000503464 DEXIO95424 95 aa8.01□□□□□ -1.13
TOPBP1-203ENST00000503464 TNNI2P48788 182 aa8.01□□□□□ -1.13
TOPBP1-203ENST00000503464 KIF23Q02241 960 aaPredicted RBP8.01□□□□□ -1.13
TOPBP1-203ENST00000503464 ICA1Q05084 483 aa8.01□□□□□ -1.13
TOPBP1-203ENST00000503464 DNM1Q05193 864 aaKnown RBP8.01□□□□□ -1.13
TOPBP1-203ENST00000503464 KIAA1755Q5JYT7 1200 aa8.01□□□□□ -1.13
TOPBP1-203ENST00000503464 PRAMEF18Q5VWM3 479 aa8.01□□□□□ -1.13
TOPBP1-203ENST00000503464 MCTP1Q6DN14 999 aa8.01□□□□□ -1.13
TOPBP1-203ENST00000503464 TYW1BQ6NUM6 668 aa8.01□□□□□ -1.13
TOPBP1-203ENST00000503464 CPLX2Q6PUV4 134 aaKnown RBP8.01□□□□□ -1.13
TOPBP1-203ENST00000503464 CCDC84Q86UT8 332 aaPredicted RBP8.01□□□□□ -1.13
TOPBP1-203ENST00000503464 TMEM87AQ8NBN3 555 aa8.01□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 161.4 ms