RNA–Protein interactions for RNA: ENST00000503360.1

HMGB1P35-201, Transcript of high mobility group box 1 pseudogene 35, humanhuman

BASIC

Gene HMGB1P35, Length 598 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P35-201ENST00000503360 C19orf44Q9H6X5 657 aa4.34□□□□□ -1.71
HMGB1P35-201ENST00000503360 CRTAC1Q9NQ79 661 aa4.34□□□□□ -1.71
HMGB1P35-201ENST00000503360 KCNH3Q9ULD8 1083 aa4.34□□□□□ -1.71
HMGB1P35-201ENST00000503360 GNEQ9Y223 722 aaKnown RBP4.34□□□□□ -1.71
HMGB1P35-201ENST00000503360 ABLIM1O14639 778 aa4.33□□□□□ -1.72
HMGB1P35-201ENST00000503360 IRS4O14654 1257 aaPredicted RBP4.33□□□□□ -1.72
HMGB1P35-201ENST00000503360 PDE6BP35913 854 aa4.33□□□□□ -1.72
HMGB1P35-201ENST00000503360 RPS26P62854 115 aaKnown RBP4.33□□□□□ -1.72
HMGB1P35-201ENST00000503360 TIGD5Q53EQ6 642 aa4.33□□□□□ -1.72
HMGB1P35-201ENST00000503360 OLFML2BQ68BL8 750 aa4.33□□□□□ -1.72
HMGB1P35-201ENST00000503360 SV2BQ7L1I2 683 aa4.33□□□□□ -1.72
HMGB1P35-201ENST00000503360 CDH24Q86UP0 819 aa4.33□□□□□ -1.72
HMGB1P35-201ENST00000503360 MBD1Q9UIS9 605 aaPredicted RBP4.33□□□□□ -1.72
HMGB1P35-201ENST00000503360 CEP131Q9UPN4 1083 aa4.33□□□□□ -1.72
HMGB1P35-201ENST00000503360 GFRA2O00451 464 aa4.32□□□□□ -1.72
HMGB1P35-201ENST00000503360 N4BP3O15049 544 aa4.32□□□□□ -1.72
HMGB1P35-201ENST00000503360 YBX1P67809 324 aaKnown RBP4.32□□□□□ -1.72
HMGB1P35-201ENST00000503360 WIPI1Q5MNZ9 446 aaPredicted RBP4.32□□□□□ -1.72
HMGB1P35-201ENST00000503360 ADAM30Q9UKF2 790 aa4.32□□□□□ -1.72
HMGB1P35-201ENST00000503360 RBM47A0AV96 593 aaKnown RBP4.31□□□□□ -1.72
HMGB1P35-201ENST00000503360 PI3P19957 117 aa4.31□□□□□ -1.72
HMGB1P35-201ENST00000503360 GRK4P32298 578 aa4.31□□□□□ -1.72
HMGB1P35-201ENST00000503360 PTPN11Q06124 597 aaPredicted RBP4.31□□□□□ -1.72
HMGB1P35-201ENST00000503360 ZFYVE27Q5T4F4 411 aa4.31□□□□□ -1.72
HMGB1P35-201ENST00000503360 TMCO4Q5TGY1 634 aa4.31□□□□□ -1.72
HMGB1P35-201ENST00000503360 NLRX1Q86UT6 975 aa4.31□□□□□ -1.72
HMGB1P35-201ENST00000503360 MCATQ8IVS2 390 aaKnown RBP4.31□□□□□ -1.72
HMGB1P35-201ENST00000503360 DTWD2Q8NBA8 298 aa4.31□□□□□ -1.72
HMGB1P35-201ENST00000503360 PPP1R13LQ8WUF5 828 aa4.31□□□□□ -1.72
HMGB1P35-201ENST00000503360 TMEM87BQ96K49 555 aa4.31□□□□□ -1.72
HMGB1P35-201ENST00000503360 SGPP1Q9BX95 441 aa4.31□□□□□ -1.72
HMGB1P35-201ENST00000503360 TREHO43280 583 aa4.3□□□□□ -1.72
HMGB1P35-201ENST00000503360 PSPNO60542 156 aa4.3□□□□□ -1.72
HMGB1P35-201ENST00000503360 LTKP29376 864 aa4.3□□□□□ -1.72
HMGB1P35-201ENST00000503360 TEKQ02763 1124 aa4.3□□□□□ -1.72
HMGB1P35-201ENST00000503360 PDE4BQ07343 736 aa4.3□□□□□ -1.72
HMGB1P35-201ENST00000503360 SND1Q7KZF4 910 aaKnown RBP eCLIP4.3□□□□□ -1.72
HMGB1P35-201ENST00000503360 TMC7Q7Z402 723 aa4.3□□□□□ -1.72
HMGB1P35-201ENST00000503360 LINC01356Q8N9X3 169 aa4.3□□□□□ -1.72
HMGB1P35-201ENST00000503360 EPB41L4AQ9HCS5 686 aaPredicted RBP4.3□□□□□ -1.72
HMGB1P35-201ENST00000503360 SIRT5Q9NXA8 310 aa4.3□□□□□ -1.72
HMGB1P35-201ENST00000503360 TJP2Q9UDY2 1190 aa4.3□□□□□ -1.72
HMGB1P35-201ENST00000503360 GPR160Q9UJ42 338 aa4.3□□□□□ -1.72
HMGB1P35-201ENST00000503360 PCDHA11Q9Y5I1 949 aa4.3□□□□□ -1.72
HMGB1P35-201ENST00000503360 PNMA6FA0A0J9YX94 578 aa4.29□□□□□ -1.72
HMGB1P35-201ENST00000503360 SOWAHDA6NJG2 315 aa4.29□□□□□ -1.72
HMGB1P35-201ENST00000503360 NOTOA8MTQ0 251 aa4.29□□□□□ -1.72
HMGB1P35-201ENST00000503360 CILPO75339 1184 aa4.29□□□□□ -1.72
HMGB1P35-201ENST00000503360 KIR2DL1P43626 348 aaPredicted RBP4.29□□□□□ -1.72
HMGB1P35-201ENST00000503360 KIR2DL2P43627 348 aaPredicted RBP4.29□□□□□ -1.72
HMGB1P35-201ENST00000503360 SRSF3P84103 164 aaKnown RBP4.29□□□□□ -1.72
HMGB1P35-201ENST00000503360 PLCB3Q01970 1234 aa4.29□□□□□ -1.72
HMGB1P35-201ENST00000503360 ENOX1Q8TC92 643 aaKnown RBP4.29□□□□□ -1.72
HMGB1P35-201ENST00000503360 RNF141Q8WVD5 230 aa4.29□□□□□ -1.72
HMGB1P35-201ENST00000503360 G6PC3Q9BUM1 346 aa4.29□□□□□ -1.72
HMGB1P35-201ENST00000503360 FAM8A1Q9UBU6 413 aa4.29□□□□□ -1.72
HMGB1P35-201ENST00000503360 CCDC9Q9Y3X0 531 aaKnown RBP4.29□□□□□ -1.72
HMGB1P35-201ENST00000503360 WASH4PA8MWX3 477 aa4.28□□□□□ -1.72
HMGB1P35-201ENST00000503360 NRDCO43847 1150 aa4.28□□□□□ -1.72
HMGB1P35-201ENST00000503360 CELA3AP09093 270 aa4.28□□□□□ -1.72
HMGB1P35-201ENST00000503360 TMEM62Q0P6H9 643 aa4.28□□□□□ -1.72
HMGB1P35-201ENST00000503360 PDZRN4Q6ZMN7 1036 aaPredicted RBP4.28□□□□□ -1.72
HMGB1P35-201ENST00000503360 FAM129CQ86XR2 697 aa4.28□□□□□ -1.72
HMGB1P35-201ENST00000503360 FEZF2Q8TBJ5 459 aa4.28□□□□□ -1.72
HMGB1P35-201ENST00000503360 PANK1Q8TE04 598 aa4.28□□□□□ -1.72
HMGB1P35-201ENST00000503360 XAGE3Q8WTP9 111 aa4.28□□□□□ -1.72
HMGB1P35-201ENST00000503360 CYB5D2Q8WUJ1 264 aa4.28□□□□□ -1.72
HMGB1P35-201ENST00000503360 OSBPL7Q9BZF2 842 aa4.28□□□□□ -1.72
HMGB1P35-201ENST00000503360 CNTD2Q9H8S5 307 aa4.28□□□□□ -1.72
HMGB1P35-201ENST00000503360 BIN2Q9UBW5 565 aaPredicted RBP4.28□□□□□ -1.72
HMGB1P35-201ENST00000503360 DCTN4Q9UJW0 460 aa4.28□□□□□ -1.72
HMGB1P35-201ENST00000503360 FBXO24O75426 580 aa4.27□□□□□ -1.73
HMGB1P35-201ENST00000503360 PGRP06401 933 aa4.27□□□□□ -1.73
HMGB1P35-201ENST00000503360 PNLIPP16233 465 aa4.27□□□□□ -1.73
HMGB1P35-201ENST00000503360 MFAP1P55081 439 aaKnown RBP4.27□□□□□ -1.73
HMGB1P35-201ENST00000503360 ERVFRD-1P60508 538 aa4.27□□□□□ -1.73
HMGB1P35-201ENST00000503360 PLP2Q04941 152 aa4.27□□□□□ -1.73
HMGB1P35-201ENST00000503360 CCDC27Q2M243 656 aa4.27□□□□□ -1.73
HMGB1P35-201ENST00000503360 ALG1LQ6GMV1 187 aa4.27□□□□□ -1.73
HMGB1P35-201ENST00000503360 CNKSR3Q6P9H4 555 aa4.27□□□□□ -1.73
HMGB1P35-201ENST00000503360 RNF111Q6ZNA4 994 aa4.27□□□□□ -1.73
HMGB1P35-201ENST00000503360 TMEFF1Q8IYR6 380 aa4.27□□□□□ -1.73
HMGB1P35-201ENST00000503360 MZB1Q8WU39 189 aa4.27□□□□□ -1.73
HMGB1P35-201ENST00000503360 FRMD6Q96NE9 622 aa4.27□□□□□ -1.73
HMGB1P35-201ENST00000503360 ASPNQ9BXN1 380 aa4.27□□□□□ -1.73
HMGB1P35-201ENST00000503360 EBF1Q9UH73 591 aa4.27□□□□□ -1.73
HMGB1P35-201ENST00000503360 VIPR1P32241 457 aa4.26□□□□□ -1.73
HMGB1P35-201ENST00000503360 EPHB3P54753 998 aa4.26□□□□□ -1.73
HMGB1P35-201ENST00000503360 ADGRF1Q5T601 910 aa4.26□□□□□ -1.73
HMGB1P35-201ENST00000503360 TTBK2Q6IQ55 1244 aa4.26□□□□□ -1.73
HMGB1P35-201ENST00000503360 PALD1Q9ULE6 856 aa4.26□□□□□ -1.73
HMGB1P35-201ENST00000503360 SPG7Q9UQ90 795 aa4.26□□□□□ -1.73
HMGB1P35-201ENST00000503360 CDK8P49336 464 aa4.25□□□□□ -1.73
HMGB1P35-201ENST00000503360 TMEM201Q5SNT2 666 aa4.25□□□□□ -1.73
HMGB1P35-201ENST00000503360 HHIPL2Q6UWX4 724 aa4.25□□□□□ -1.73
HMGB1P35-201ENST00000503360 SLFN12Q8IYM2 578 aa4.25□□□□□ -1.73
HMGB1P35-201ENST00000503360 ACSF2Q96CM8 615 aaPredicted RBP4.25□□□□□ -1.73
HMGB1P35-201ENST00000503360 C12orf49Q9H741 205 aa4.25□□□□□ -1.73
HMGB1P35-201ENST00000503360 INSRRP14616 1297 aa4.24□□□□□ -1.73
HMGB1P35-201ENST00000503360 CDR1P51861 262 aa4.24□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms