RNA–Protein interactions for RNA: ENST00000502802.1

HMGB1P3-201, Transcript of high mobility group box 1 pseudogene 3, humanhuman

BASIC

Gene HMGB1P3, Length 616 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P3-201ENST00000502802 FNDC3BQ53EP0 1204 aaKnown RBP7.41□□□□□ -1.22
HMGB1P3-201ENST00000502802 FAM209AQ5JX71 171 aa7.41□□□□□ -1.22
HMGB1P3-201ENST00000502802 DCAF15Q66K64 600 aa7.41□□□□□ -1.22
HMGB1P3-201ENST00000502802 ANKRD34AQ69YU3 496 aa7.41□□□□□ -1.22
HMGB1P3-201ENST00000502802 ADAT2Q7Z6V5 191 aaKnown RBP7.41□□□□□ -1.22
HMGB1P3-201ENST00000502802 SCUBE1Q8IWY4 988 aa7.41□□□□□ -1.22
HMGB1P3-201ENST00000502802 DHX37Q8IY37 1157 aaKnown RBP7.41□□□□□ -1.22
HMGB1P3-201ENST00000502802 C2CD4AQ8NCU7 369 aaPredicted RBP7.41□□□□□ -1.22
HMGB1P3-201ENST00000502802 PPP1R13LQ8WUF5 828 aa7.41□□□□□ -1.22
HMGB1P3-201ENST00000502802 PPP1R14AQ96A00 147 aa7.41□□□□□ -1.22
HMGB1P3-201ENST00000502802 ZNF512BQ96KM6 892 aaPredicted RBP7.41□□□□□ -1.22
HMGB1P3-201ENST00000502802 FGD4Q96M96 766 aa7.41□□□□□ -1.22
HMGB1P3-201ENST00000502802 MKRN2Q9H000 416 aaKnown RBP7.41□□□□□ -1.22
HMGB1P3-201ENST00000502802 GBP3Q9H0R5 595 aa7.41□□□□□ -1.22
HMGB1P3-201ENST00000502802 FAM105AQ9NUU6 356 aa7.41□□□□□ -1.22
HMGB1P3-201ENST00000502802 DDX56Q9NY93 547 aaKnown RBP7.41□□□□□ -1.22
HMGB1P3-201ENST00000502802 CEP131Q9UPN4 1083 aa7.41□□□□□ -1.22
HMGB1P3-201ENST00000502802 MRPS23Q9Y3D9 190 aaKnown RBP7.41□□□□□ -1.22
HMGB1P3-201ENST00000502802 TRBV23-1A0A0A0MS06 115 aa7.4□□□□□ -1.22
HMGB1P3-201ENST00000502802 ITGAVP06756 1048 aa7.4□□□□□ -1.22
HMGB1P3-201ENST00000502802 ELNP15502 786 aa7.4□□□□□ -1.22
HMGB1P3-201ENST00000502802 NBPF12Q5TAG4 269 aaPredicted RBP7.4□□□□□ -1.22
HMGB1P3-201ENST00000502802 LINC00114Q6XXX2 140 aa7.4□□□□□ -1.22
HMGB1P3-201ENST00000502802 ARMCX6Q7L4S7 300 aa7.4□□□□□ -1.22
HMGB1P3-201ENST00000502802 ZNF513Q8N8E2 541 aaPredicted RBP7.4□□□□□ -1.22
HMGB1P3-201ENST00000502802 APEX2Q9UBZ4 518 aa7.4□□□□□ -1.22
HMGB1P3-201ENST00000502802 ZNF451Q9Y4E5 1061 aa7.4□□□□□ -1.22
HMGB1P3-201ENST00000502802 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP7.39□□□□□ -1.23
HMGB1P3-201ENST00000502802 IRS4O14654 1257 aaPredicted RBP7.39□□□□□ -1.23
HMGB1P3-201ENST00000502802 PPM1BO75688 479 aa7.39□□□□□ -1.23
HMGB1P3-201ENST00000502802 MYCLP1P12525 358 aaPredicted RBP7.39□□□□□ -1.23
HMGB1P3-201ENST00000502802 CD247P20963 164 aa7.39□□□□□ -1.23
HMGB1P3-201ENST00000502802 CNGA1P29973 690 aa7.39□□□□□ -1.23
HMGB1P3-201ENST00000502802 GMPRP36959 345 aa7.39□□□□□ -1.23
HMGB1P3-201ENST00000502802 YOD1Q5VVQ6 348 aaPredicted RBP7.39□□□□□ -1.23
HMGB1P3-201ENST00000502802 ZNF227Q86WZ6 799 aa7.39□□□□□ -1.23
HMGB1P3-201ENST00000502802 THNSL2Q86YJ6 484 aa7.39□□□□□ -1.23
HMGB1P3-201ENST00000502802 C7orf61Q8IZ16 206 aa7.39□□□□□ -1.23
HMGB1P3-201ENST00000502802 TMEM130Q8N3G9 435 aa7.39□□□□□ -1.23
HMGB1P3-201ENST00000502802 BVESQ8NE79 360 aa7.39□□□□□ -1.23
HMGB1P3-201ENST00000502802 CHAC2Q8WUX2 184 aa7.39□□□□□ -1.23
HMGB1P3-201ENST00000502802 VWCEQ96DN2 955 aa7.39□□□□□ -1.23
HMGB1P3-201ENST00000502802 WHRNQ9P202 907 aa7.39□□□□□ -1.23
HMGB1P3-201ENST00000502802 KLHL42Q9P2K6 505 aa7.39□□□□□ -1.23
HMGB1P3-201ENST00000502802 SUGT1Q9Y2Z0 365 aa7.39□□□□□ -1.23
HMGB1P3-201ENST00000502802 F8W735 103 aaPredicted RBP7.38□□□□□ -1.23
HMGB1P3-201ENST00000502802 FAM229AH3BQW9 127 aa7.38□□□□□ -1.23
HMGB1P3-201ENST00000502802 PIK3R2O00459 728 aa7.38□□□□□ -1.23
HMGB1P3-201ENST00000502802 NOP56O00567 594 aaKnown RBP7.38□□□□□ -1.23
HMGB1P3-201ENST00000502802 GNB5O14775 395 aa7.38□□□□□ -1.23
HMGB1P3-201ENST00000502802 RAPGEF3O95398 923 aa7.38□□□□□ -1.23
HMGB1P3-201ENST00000502802 FGFR1P11362 822 aa7.38□□□□□ -1.23
HMGB1P3-201ENST00000502802 STAT3P40763 770 aa7.38□□□□□ -1.23
HMGB1P3-201ENST00000502802 RNF4P78317 190 aa7.38□□□□□ -1.23
HMGB1P3-201ENST00000502802 PLEKHG6Q3KR16 790 aa7.38□□□□□ -1.23
HMGB1P3-201ENST00000502802 AGGF1Q8N302 714 aaeCLIP7.38□□□□□ -1.23
HMGB1P3-201ENST00000502802 DNAJB8Q8NHS0 232 aa7.38□□□□□ -1.23
HMGB1P3-201ENST00000502802 STAG1Q8WVM7 1258 aa7.38□□□□□ -1.23
HMGB1P3-201ENST00000502802 KREMEN1Q96MU8 473 aa7.38□□□□□ -1.23
HMGB1P3-201ENST00000502802 MRPL4Q9BYD3 311 aaKnown RBP7.38□□□□□ -1.23
HMGB1P3-201ENST00000502802 CAAP1Q9H8G2 361 aa7.38□□□□□ -1.23
HMGB1P3-201ENST00000502802 DNAJC25-GNG10A0A024R161 153 aa7.37□□□□□ -1.23
HMGB1P3-201ENST00000502802 A0A087X0B3 334 aa7.37□□□□□ -1.23
HMGB1P3-201ENST00000502802 KRBA1A5PL33 1030 aa7.37□□□□□ -1.23
HMGB1P3-201ENST00000502802 CAPNS1P04632 268 aa7.37□□□□□ -1.23
HMGB1P3-201ENST00000502802 PABPC1P11940 636 aaKnown RBP7.37□□□□□ -1.23
HMGB1P3-201ENST00000502802 SNRPNP63162 240 aaKnown RBP7.37□□□□□ -1.23
HMGB1P3-201ENST00000502802 SUMO1P63165 101 aaKnown RBP7.37□□□□□ -1.23
HMGB1P3-201ENST00000502802 AUHQ13825 339 aaKnown RBP7.37□□□□□ -1.23
HMGB1P3-201ENST00000502802 ZNF385CQ66K41 422 aaPredicted RBP7.37□□□□□ -1.23
HMGB1P3-201ENST00000502802 NSMFQ6X4W1 530 aa7.37□□□□□ -1.23
HMGB1P3-201ENST00000502802 RCC1LQ96I51 464 aaKnown RBP7.37□□□□□ -1.23
HMGB1P3-201ENST00000502802 MRGPRX3Q96LB0 322 aa7.37□□□□□ -1.23
HMGB1P3-201ENST00000502802 CLUHP3Q96NS8 147 aa7.37□□□□□ -1.23
HMGB1P3-201ENST00000502802 LGR4Q9BXB1 951 aa7.37□□□□□ -1.23
HMGB1P3-201ENST00000502802 ACSS3Q9H6R3 686 aa7.37□□□□□ -1.23
HMGB1P3-201ENST00000502802 TYW1Q9NV66 732 aaKnown RBP7.37□□□□□ -1.23
HMGB1P3-201ENST00000502802 AKT3Q9Y243 479 aa7.37□□□□□ -1.23
HMGB1P3-201ENST00000502802 COL17A1Q9UMD9 1497 aaPredicted RBP7.36□□□□□ -1.23
HMGB1P3-201ENST00000502802 SHOXO15266 292 aa7.36□□□□□ -1.23
HMGB1P3-201ENST00000502802 PRODHO43272 600 aa7.36□□□□□ -1.23
HMGB1P3-201ENST00000502802 SART1O43290 800 aaKnown RBP7.36□□□□□ -1.23
HMGB1P3-201ENST00000502802 PDE8AO60658 829 aa7.36□□□□□ -1.23
HMGB1P3-201ENST00000502802 PDGFRBP09619 1106 aa7.36□□□□□ -1.23
HMGB1P3-201ENST00000502802 ITGA4P13612 1032 aa7.36□□□□□ -1.23
HMGB1P3-201ENST00000502802 USP11P51784 963 aa7.36□□□□□ -1.23
HMGB1P3-201ENST00000502802 PRRT3Q5FWE3 981 aa7.36□□□□□ -1.23
HMGB1P3-201ENST00000502802 LETMD1Q6P1Q0 360 aa7.36□□□□□ -1.23
HMGB1P3-201ENST00000502802 POMZP3Q6PJE2 187 aa7.36□□□□□ -1.23
HMGB1P3-201ENST00000502802 CRACR2BQ8N4Y2 399 aaPredicted RBP7.36□□□□□ -1.23
HMGB1P3-201ENST00000502802 MIPEPQ99797 713 aa7.36□□□□□ -1.23
HMGB1P3-201ENST00000502802 IRF2BPLQ9H1B7 796 aa7.36□□□□□ -1.23
HMGB1P3-201ENST00000502802 GP6Q9HCN6 339 aa7.36□□□□□ -1.23
HMGB1P3-201ENST00000502802 MKL2Q9ULH7 1088 aa7.36□□□□□ -1.23
HMGB1P3-201ENST00000502802 ATP8A1Q9Y2Q0 1164 aa7.36□□□□□ -1.23
HMGB1P3-201ENST00000502802 EMC9Q9Y3B6 208 aa7.36□□□□□ -1.23
HMGB1P3-201ENST00000502802 A0A087WZG4 1122 aa7.35□□□□□ -1.23
HMGB1P3-201ENST00000502802 KCNQ2O43526 872 aa7.35□□□□□ -1.23
HMGB1P3-201ENST00000502802 RAB6AP20340 208 aa7.35□□□□□ -1.23
HMGB1P3-201ENST00000502802 SOX5P35711 763 aa7.35□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms