RNA–Protein interactions for RNA: ENST00000502313.1

HMGB1P21-201, Transcript of high mobility group box 1 pseudogene 21, humanhuman

BASIC

Gene HMGB1P21, Length 581 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P21-201ENST00000502313 C19orf57Q0VDD7 668 aa5.42□□□□□ -1.54
HMGB1P21-201ENST00000502313 RAPGEF1Q13905 1077 aa5.42□□□□□ -1.54
HMGB1P21-201ENST00000502313 HLTFQ14527 1009 aaKnown RBP eCLIP5.42□□□□□ -1.54
HMGB1P21-201ENST00000502313 MLC1Q15049 377 aa5.42□□□□□ -1.54
HMGB1P21-201ENST00000502313 FXNQ16595 210 aa5.42□□□□□ -1.54
HMGB1P21-201ENST00000502313 SCARA3Q6AZY7 606 aa5.42□□□□□ -1.54
HMGB1P21-201ENST00000502313 KANK3Q6NY19 840 aa5.42□□□□□ -1.54
HMGB1P21-201ENST00000502313 SLCO4C1Q6ZQN7 724 aa5.42□□□□□ -1.54
HMGB1P21-201ENST00000502313 GK5Q6ZS86 529 aa5.42□□□□□ -1.54
HMGB1P21-201ENST00000502313 REC114Q7Z4M0 266 aa5.42□□□□□ -1.54
HMGB1P21-201ENST00000502313 VN1R5Q7Z5H4 357 aa5.42□□□□□ -1.54
HMGB1P21-201ENST00000502313 STRA8Q7Z7C7 330 aa5.42□□□□□ -1.54
HMGB1P21-201ENST00000502313 RNF180Q86T96 592 aa5.42□□□□□ -1.54
HMGB1P21-201ENST00000502313 SLITRK4Q8IW52 837 aa5.42□□□□□ -1.54
HMGB1P21-201ENST00000502313 DCAF11Q8TEB1 546 aa5.42□□□□□ -1.54
HMGB1P21-201ENST00000502313 SLC16A10Q8TF71 515 aa5.42□□□□□ -1.54
HMGB1P21-201ENST00000502313 NEUROD6Q96NK8 337 aa5.42□□□□□ -1.54
HMGB1P21-201ENST00000502313 LRRC3Q9BY71 257 aa5.42□□□□□ -1.54
HMGB1P21-201ENST00000502313 CCDC8Q9H0W5 538 aaPredicted RBP5.42□□□□□ -1.54
HMGB1P21-201ENST00000502313 HCN2Q9UL51 889 aa5.42□□□□□ -1.54
HMGB1P21-201ENST00000502313 MRPS23Q9Y3D9 190 aaKnown RBP5.42□□□□□ -1.54
HMGB1P21-201ENST00000502313 DAAM1Q9Y4D1 1078 aa5.42□□□□□ -1.54
HMGB1P21-201ENST00000502313 PCDHB5Q9Y5E4 795 aa5.42□□□□□ -1.54
HMGB1P21-201ENST00000502313 ABCA9Q8IUA7 1624 aa5.41□□□□□ -1.54
HMGB1P21-201ENST00000502313 B2RBV5 119 aa5.41□□□□□ -1.54
HMGB1P21-201ENST00000502313 DDAH1O94760 285 aa5.41□□□□□ -1.54
HMGB1P21-201ENST00000502313 GSTP1P09211 210 aaKnown RBP5.41□□□□□ -1.54
HMGB1P21-201ENST00000502313 EPHA1P21709 976 aa5.41□□□□□ -1.54
HMGB1P21-201ENST00000502313 RPL6Q02878 288 aaKnown RBP5.41□□□□□ -1.54
HMGB1P21-201ENST00000502313 PPP2R5EQ16537 467 aa5.41□□□□□ -1.54
HMGB1P21-201ENST00000502313 ZNF423Q2M1K9 1284 aa5.41□□□□□ -1.54
HMGB1P21-201ENST00000502313 GRAMD1BQ3KR37 738 aa5.41□□□□□ -1.54
HMGB1P21-201ENST00000502313 AKAP4Q5JQC9 854 aa5.41□□□□□ -1.54
HMGB1P21-201ENST00000502313 IL31Q6EBC2 164 aa5.41□□□□□ -1.54
HMGB1P21-201ENST00000502313 IFNL3Q8IZI9 196 aa5.41□□□□□ -1.54
HMGB1P21-201ENST00000502313 MYRIPQ8NFW9 859 aa5.41□□□□□ -1.54
HMGB1P21-201ENST00000502313 FBXO27Q8NI29 283 aa5.41□□□□□ -1.54
HMGB1P21-201ENST00000502313 TTC9Q92623 222 aa5.41□□□□□ -1.54
HMGB1P21-201ENST00000502313 ELMO3Q96BJ8 720 aa5.41□□□□□ -1.54
HMGB1P21-201ENST00000502313 USP26Q9BXU7 913 aa5.41□□□□□ -1.54
HMGB1P21-201ENST00000502313 RTFDC1Q9BY42 306 aaPredicted RBP5.41□□□□□ -1.54
HMGB1P21-201ENST00000502313 ZHX3Q9H4I2 956 aa5.41□□□□□ -1.54
HMGB1P21-201ENST00000502313 SOX17Q9H6I2 414 aaPredicted RBP5.41□□□□□ -1.54
HMGB1P21-201ENST00000502313 NXF1Q9UBU9 619 aaKnown RBP5.41□□□□□ -1.54
HMGB1P21-201ENST00000502313 KLF15Q9UIH9 416 aa5.41□□□□□ -1.54
HMGB1P21-201ENST00000502313 ANAPC4Q9UJX5 808 aa5.41□□□□□ -1.54
HMGB1P21-201ENST00000502313 PCDHA4Q9UN74 947 aa5.41□□□□□ -1.54
HMGB1P21-201ENST00000502313 ARAP3Q8WWN8 1544 aa5.41□□□□□ -1.54
HMGB1P21-201ENST00000502313 LIG1P18858 919 aa5.4□□□□□ -1.54
HMGB1P21-201ENST00000502313 PABPC4Q13310 644 aaKnown RBP eCLIP5.4□□□□□ -1.54
HMGB1P21-201ENST00000502313 MORC3Q14149 939 aa5.4□□□□□ -1.54
HMGB1P21-201ENST00000502313 POU4F3Q15319 338 aa5.4□□□□□ -1.54
HMGB1P21-201ENST00000502313 MAPRE1Q15691 268 aaKnown RBP5.4□□□□□ -1.54
HMGB1P21-201ENST00000502313 TMEM95Q3KNT9 176 aa5.4□□□□□ -1.54
HMGB1P21-201ENST00000502313 ZNF280DQ6N043 979 aa5.4□□□□□ -1.54
HMGB1P21-201ENST00000502313 TXNDC11Q6PKC3 985 aa5.4□□□□□ -1.54
HMGB1P21-201ENST00000502313 FCHSD1Q86WN1 690 aa5.4□□□□□ -1.54
HMGB1P21-201ENST00000502313 SPICE1Q8N0Z3 855 aa5.4□□□□□ -1.54
HMGB1P21-201ENST00000502313 REXO1Q8N1G1 1221 aaKnown RBP5.4□□□□□ -1.54
HMGB1P21-201ENST00000502313 WNT8BQ93098 351 aa5.4□□□□□ -1.54
HMGB1P21-201ENST00000502313 HOOK2Q96ED9 719 aa5.4□□□□□ -1.54
HMGB1P21-201ENST00000502313 INO80BQ9C086 356 aaPredicted RBP5.4□□□□□ -1.54
HMGB1P21-201ENST00000502313 ZC3H12CQ9C0D7 883 aaKnown RBP5.4□□□□□ -1.54
HMGB1P21-201ENST00000502313 BRMS1Q9HCU9 246 aa5.4□□□□□ -1.54
HMGB1P21-201ENST00000502313 AASDHPPTQ9NRN7 309 aa5.4□□□□□ -1.54
HMGB1P21-201ENST00000502313 LZTS1Q9Y250 596 aa5.4□□□□□ -1.54
HMGB1P21-201ENST00000502313 SCINQ9Y6U3 715 aa5.4□□□□□ -1.54
HMGB1P21-201ENST00000502313 GSG1L2A8MUP6 293 aa5.39□□□□□ -1.55
HMGB1P21-201ENST00000502313 LINC01387J3KSC0 135 aa5.39□□□□□ -1.55
HMGB1P21-201ENST00000502313 CILPO75339 1184 aa5.39□□□□□ -1.55
HMGB1P21-201ENST00000502313 BMP6P22004 513 aa5.39□□□□□ -1.55
HMGB1P21-201ENST00000502313 MAN1A1P33908 653 aa5.39□□□□□ -1.55
HMGB1P21-201ENST00000502313 NEK3P51956 506 aa5.39□□□□□ -1.55
HMGB1P21-201ENST00000502313 PDE4BQ07343 736 aa5.39□□□□□ -1.55
HMGB1P21-201ENST00000502313 ITKQ08881 620 aa5.39□□□□□ -1.55
HMGB1P21-201ENST00000502313 MTMR1Q13613 665 aa5.39□□□□□ -1.55
HMGB1P21-201ENST00000502313 LRRFIP1Q32MZ4 808 aaKnown RBP5.39□□□□□ -1.55
HMGB1P21-201ENST00000502313 WIPI1Q5MNZ9 446 aaPredicted RBP5.39□□□□□ -1.55
HMGB1P21-201ENST00000502313 ACBD5Q5T8D3 534 aaPredicted RBP5.39□□□□□ -1.55
HMGB1P21-201ENST00000502313 LCE2AQ5TA79 106 aaPredicted RBP5.39□□□□□ -1.55
HMGB1P21-201ENST00000502313 ERAP2Q6P179 960 aa5.39□□□□□ -1.55
HMGB1P21-201ENST00000502313 LHFPL2Q6ZUX7 228 aa5.39□□□□□ -1.55
HMGB1P21-201ENST00000502313 HDXQ7Z353 690 aa5.39□□□□□ -1.55
HMGB1P21-201ENST00000502313 MAP4K3Q8IVH8 894 aa5.39□□□□□ -1.55
HMGB1P21-201ENST00000502313 NPAS3Q8IXF0 933 aa5.39□□□□□ -1.55
HMGB1P21-201ENST00000502313 AFAP1L2Q8N4X5 818 aa5.39□□□□□ -1.55
HMGB1P21-201ENST00000502313 PDILTQ8N807 584 aa5.39□□□□□ -1.55
HMGB1P21-201ENST00000502313 ZSWIM2Q8NEG5 633 aa5.39□□□□□ -1.55
HMGB1P21-201ENST00000502313 GRIN3AQ8TCU5 1115 aa5.39□□□□□ -1.55
HMGB1P21-201ENST00000502313 PKNOX2Q96KN3 472 aa5.39□□□□□ -1.55
HMGB1P21-201ENST00000502313 YIPF4Q9BSR8 244 aa5.39□□□□□ -1.55
HMGB1P21-201ENST00000502313 CDH19Q9H159 772 aa5.39□□□□□ -1.55
HMGB1P21-201ENST00000502313 OSGEPQ9NPF4 335 aa5.39□□□□□ -1.55
HMGB1P21-201ENST00000502313 JADE2Q9NQC1 790 aa5.39□□□□□ -1.55
HMGB1P21-201ENST00000502313 PCDHB14Q9Y5E9 798 aa5.39□□□□□ -1.55
HMGB1P21-201ENST00000502313 CFAP43Q8NDM7 1665 aa5.39□□□□□ -1.55
HMGB1P21-201ENST00000502313 FMN1Q68DA7 1419 aa5.39□□□□□ -1.55
HMGB1P21-201ENST00000502313 CASKIN1Q8WXD9 1431 aa5.39□□□□□ -1.55
HMGB1P21-201ENST00000502313 LRRIQ1Q96JM4 1722 aa5.38□□□□□ -1.55
HMGB1P21-201ENST00000502313 FAM221AA4D161 298 aa5.38□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 166.9 ms