RNA–Protein interactions for RNA: ENST00000498056.1

CPNE1-227, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 362 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-227ENST00000498056 USP17L10C9JJH3 530 aa15.9■□□□□ 0.14
CPNE1-227ENST00000498056 IRF6O14896 467 aa15.9■□□□□ 0.14
CPNE1-227ENST00000498056 ST18O60284 1047 aa15.9■□□□□ 0.14
CPNE1-227ENST00000498056 SLC10A3P09131 477 aa15.9■□□□□ 0.14
CPNE1-227ENST00000498056 GJA5P36382 358 aa15.9■□□□□ 0.14
CPNE1-227ENST00000498056 AK2P54819 239 aa15.9■□□□□ 0.14
CPNE1-227ENST00000498056 HMGCS2P54868 508 aa15.9■□□□□ 0.14
CPNE1-227ENST00000498056 DGKZQ13574 1117 aa15.9■□□□□ 0.14
CPNE1-227ENST00000498056 TOB2Q14106 344 aaPredicted RBP15.9■□□□□ 0.14
CPNE1-227ENST00000498056 DGKHQ86XP1 1220 aa15.9■□□□□ 0.14
CPNE1-227ENST00000498056 RAB11FIP4Q86YS3 637 aa15.9■□□□□ 0.14
CPNE1-227ENST00000498056 PNMA1Q8ND90 353 aa15.9■□□□□ 0.14
CPNE1-227ENST00000498056 IGDCC4Q8TDY8 1250 aa15.9■□□□□ 0.14
CPNE1-227ENST00000498056 TTC14Q96N46 770 aa15.9■□□□□ 0.14
CPNE1-227ENST00000498056 WDR18Q9BV38 432 aa15.9■□□□□ 0.14
CPNE1-227ENST00000498056 AFG3L2Q9Y4W6 797 aa15.9■□□□□ 0.14
CPNE1-227ENST00000498056 BAZ2BQ9UIF8 2168 aaKnown RBP15.9■□□□□ 0.14
CPNE1-227ENST00000498056 GOLGA8BA8MQT2 603 aa15.89■□□□□ 0.13
CPNE1-227ENST00000498056 HTRA3P83110 453 aa15.89■□□□□ 0.13
CPNE1-227ENST00000498056 APOBRQ0VD83 1088 aa15.89■□□□□ 0.13
CPNE1-227ENST00000498056 GADL1Q6ZQY3 521 aa15.89■□□□□ 0.13
CPNE1-227ENST00000498056 MICU3Q86XE3 530 aa15.89■□□□□ 0.13
CPNE1-227ENST00000498056 ZNF654Q8IZM8 581 aa15.89■□□□□ 0.13
CPNE1-227ENST00000498056 SPICE1Q8N0Z3 855 aa15.89■□□□□ 0.13
CPNE1-227ENST00000498056 MYL10Q9BUA6 226 aa15.89■□□□□ 0.13
CPNE1-227ENST00000498056 TMOD4Q9NZQ9 345 aa15.89■□□□□ 0.13
CPNE1-227ENST00000498056 ZBTB48P10074 688 aaPredicted RBP15.88■□□□□ 0.13
CPNE1-227ENST00000498056 LIFRP42702 1097 aa15.88■□□□□ 0.13
CPNE1-227ENST00000498056 NOVP48745 357 aa15.88■□□□□ 0.13
CPNE1-227ENST00000498056 USP14P54578 494 aa15.88■□□□□ 0.13
CPNE1-227ENST00000498056 C1QTNF8P60827 252 aa15.88■□□□□ 0.13
CPNE1-227ENST00000498056 ANKRD1Q15327 319 aa15.88■□□□□ 0.13
CPNE1-227ENST00000498056 CCDC96Q2M329 555 aa15.88■□□□□ 0.13
CPNE1-227ENST00000498056 SPRYD7Q5W111 196 aa15.88■□□□□ 0.13
CPNE1-227ENST00000498056 CYP4F22Q6NT55 531 aa15.88■□□□□ 0.13
CPNE1-227ENST00000498056 APOA5Q6Q788 366 aa15.88■□□□□ 0.13
CPNE1-227ENST00000498056 CATIPQ7Z7H3 387 aa15.88■□□□□ 0.13
CPNE1-227ENST00000498056 SIAH1Q8IUQ4 282 aa15.88■□□□□ 0.13
CPNE1-227ENST00000498056 NUP133Q8WUM0 1156 aa15.88■□□□□ 0.13
CPNE1-227ENST00000498056 HHIPL1Q96JK4 782 aa15.88■□□□□ 0.13
CPNE1-227ENST00000498056 LARP6Q9BRS8 491 aaKnown RBP15.88■□□□□ 0.13
CPNE1-227ENST00000498056 KIAA1683Q9H0B3 1180 aa15.88■□□□□ 0.13
CPNE1-227ENST00000498056 VCPKMTQ9H867 229 aa15.88■□□□□ 0.13
CPNE1-227ENST00000498056 TMX2Q9Y320 296 aa15.88■□□□□ 0.13
CPNE1-227ENST00000498056 SLC12A7Q9Y666 1083 aa15.88■□□□□ 0.13
CPNE1-227ENST00000498056 DDAH1O94760 285 aa15.87■□□□□ 0.13
CPNE1-227ENST00000498056 NDUFB10O96000 172 aa15.87■□□□□ 0.13
CPNE1-227ENST00000498056 RXRAP19793 462 aa15.87■□□□□ 0.13
CPNE1-227ENST00000498056 BACE1P56817 501 aa15.87■□□□□ 0.13
CPNE1-227ENST00000498056 SNAPC2Q13487 334 aa15.87■□□□□ 0.13
CPNE1-227ENST00000498056 SLFN13Q68D06 897 aa15.87■□□□□ 0.13
CPNE1-227ENST00000498056 USP17L2Q6R6M4 530 aa15.87■□□□□ 0.13
CPNE1-227ENST00000498056 SYNE3Q6ZMZ3 975 aa15.87■□□□□ 0.13
CPNE1-227ENST00000498056 CCDC144CPQ8IYA2 1237 aa15.87■□□□□ 0.13
CPNE1-227ENST00000498056 GMCL1P1Q8NEA9 526 aa15.87■□□□□ 0.13
CPNE1-227ENST00000498056 AGXT2Q9BYV1 514 aa15.87■□□□□ 0.13
CPNE1-227ENST00000498056 SYNPO2Q9UMS6 1093 aa15.87■□□□□ 0.13
CPNE1-227ENST00000498056 KCNH4Q9UQ05 1017 aa15.87■□□□□ 0.13
CPNE1-227ENST00000498056 FRMPD2Q68DX3 1309 aaPredicted RBP15.87■□□□□ 0.13
CPNE1-227ENST00000498056 CCL15-CCL14A0A0B4J2E2 113 aa15.86■□□□□ 0.13
CPNE1-227ENST00000498056 A0A0G2JLL6 359 aaPredicted RBP15.86■□□□□ 0.13
CPNE1-227ENST00000498056 RASSF10A6NK89 507 aa15.86■□□□□ 0.13
CPNE1-227ENST00000498056 GOLGA8AA7E2F4 631 aa15.86■□□□□ 0.13
CPNE1-227ENST00000498056 ZBTB43O43298 467 aa15.86■□□□□ 0.13
CPNE1-227ENST00000498056 VCAM1P19320 739 aa15.86■□□□□ 0.13
CPNE1-227ENST00000498056 CCL15Q16663 113 aa15.86■□□□□ 0.13
CPNE1-227ENST00000498056 DEFB115Q30KQ5 88 aa15.86■□□□□ 0.13
CPNE1-227ENST00000498056 PRRT2Q7Z6L0 340 aaPredicted RBP15.86■□□□□ 0.13
CPNE1-227ENST00000498056 SGMS1Q86VZ5 419 aa15.86■□□□□ 0.13
CPNE1-227ENST00000498056 TMTC2Q8N394 836 aa15.86■□□□□ 0.13
CPNE1-227ENST00000498056 ANKS1AQ92625 1134 aa15.86■□□□□ 0.13
CPNE1-227ENST00000498056 CAPNS2Q96L46 248 aa15.86■□□□□ 0.13
CPNE1-227ENST00000498056 NUP88Q99567 741 aaPredicted RBP15.86■□□□□ 0.13
CPNE1-227ENST00000498056 TANGO6Q9C0B7 1094 aa15.86■□□□□ 0.13
CPNE1-227ENST00000498056 BRPF3Q9ULD4 1205 aa15.86■□□□□ 0.13
CPNE1-227ENST00000498056 C19orf81C9J6K1 198 aa15.85■□□□□ 0.13
CPNE1-227ENST00000498056 F5H6K3 240 aa15.85■□□□□ 0.13
CPNE1-227ENST00000498056 CXCL11O14625 94 aa15.85■□□□□ 0.13
CPNE1-227ENST00000498056 CD2BP2O95400 341 aaKnown RBP15.85■□□□□ 0.13
CPNE1-227ENST00000498056 PDHBP11177 359 aa15.85■□□□□ 0.13
CPNE1-227ENST00000498056 HSPA6P17066 643 aa15.85■□□□□ 0.13
CPNE1-227ENST00000498056 SLC1A4P43007 532 aa15.85■□□□□ 0.13
CPNE1-227ENST00000498056 GTF2A2P52657 109 aa15.85■□□□□ 0.13
CPNE1-227ENST00000498056 KLRC3Q07444 240 aa15.85■□□□□ 0.13
CPNE1-227ENST00000498056 STK3Q13188 491 aa15.85■□□□□ 0.13
CPNE1-227ENST00000498056 KIAA1755Q5JYT7 1200 aa15.85■□□□□ 0.13
CPNE1-227ENST00000498056 FAM83BQ5T0W9 1011 aa15.85■□□□□ 0.13
CPNE1-227ENST00000498056 CTCFLQ8NI51 663 aaPredicted RBP15.85■□□□□ 0.13
CPNE1-227ENST00000498056 DCAF4Q8WV16 495 aa15.85■□□□□ 0.13
CPNE1-227ENST00000498056 LPAR1Q92633 364 aa15.85■□□□□ 0.13
CPNE1-227ENST00000498056 MKL1Q969V6 931 aa15.85■□□□□ 0.13
CPNE1-227ENST00000498056 CCDC102AQ96A19 550 aa15.85■□□□□ 0.13
CPNE1-227ENST00000498056 EMILIN3Q9NT22 766 aa15.85■□□□□ 0.13
CPNE1-227ENST00000498056 FAM155AB1AL88 458 aaPredicted RBP15.84■□□□□ 0.13
CPNE1-227ENST00000498056 WDR46O15213 610 aaKnown RBP15.84■□□□□ 0.13
CPNE1-227ENST00000498056 LARGE1O95461 756 aa15.84■□□□□ 0.13
CPNE1-227ENST00000498056 CALM1P0DP23 149 aa15.84■□□□□ 0.13
CPNE1-227ENST00000498056 CALM2P0DP24 149 aa15.84■□□□□ 0.13
CPNE1-227ENST00000498056 CALM3P0DP25 149 aa15.84■□□□□ 0.13
CPNE1-227ENST00000498056 CETPP11597 493 aa15.84■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 133.3 ms