RNA–Protein interactions for RNA: ENST00000495688.5

PTPN7-217, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 1 (best)

Gene PTPN7, Length 2,689 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-217ENST00000495688 TNFRSF25Q93038 417 aa14.79□□□□□ -0.04
PTPN7-217ENST00000495688 XDHP47989 1333 aa14.79□□□□□ -0.04
PTPN7-217ENST00000495688 TBC1D8O95759 1140 aa14.79□□□□□ -0.04
PTPN7-217ENST00000495688 PBX1P40424 430 aa14.79□□□□□ -0.04
PTPN7-217ENST00000495688 TTC38Q5R3I4 469 aa14.79□□□□□ -0.04
PTPN7-217ENST00000495688 RSRC2Q7L4I2 434 aaKnown RBP14.79□□□□□ -0.04
PTPN7-217ENST00000495688 PPFIBP1Q86W92 1011 aa14.79□□□□□ -0.04
PTPN7-217ENST00000495688 CREBRFQ8IUR6 639 aa14.79□□□□□ -0.04
PTPN7-217ENST00000495688 CCDC34Q96HJ3 373 aa14.79□□□□□ -0.04
PTPN7-217ENST00000495688 MTRQ99707 1265 aa14.79□□□□□ -0.04
PTPN7-217ENST00000495688 PARD6BQ9BYG5 372 aa14.79□□□□□ -0.04
PTPN7-217ENST00000495688 ZCCHC17Q9NP64 241 aaKnown RBP14.79□□□□□ -0.04
PTPN7-217ENST00000495688 CTNND2Q9UQB3 1225 aa14.79□□□□□ -0.04
PTPN7-217ENST00000495688 MYH14Q7Z406 1995 aaKnown RBP14.79□□□□□ -0.04
PTPN7-217ENST00000495688 ZNF804BA4D1E1 1349 aa14.78□□□□□ -0.04
PTPN7-217ENST00000495688 RNF225M0QZC1 329 aaPredicted RBP14.78□□□□□ -0.04
PTPN7-217ENST00000495688 GYPCP04921 128 aa14.78□□□□□ -0.04
PTPN7-217ENST00000495688 KLRK1P26718 216 aa14.78□□□□□ -0.04
PTPN7-217ENST00000495688 IL17AQ16552 155 aa14.78□□□□□ -0.04
PTPN7-217ENST00000495688 CC2D1AQ6P1N0 951 aaPredicted RBP14.78□□□□□ -0.04
PTPN7-217ENST00000495688 CTR9Q6PD62 1173 aa14.78□□□□□ -0.04
PTPN7-217ENST00000495688 PIK3AP1Q6ZUJ8 805 aa14.78□□□□□ -0.04
PTPN7-217ENST00000495688 IQCA1Q86XH1 822 aa14.78□□□□□ -0.04
PTPN7-217ENST00000495688 PANX2Q96RD6 677 aa14.78□□□□□ -0.04
PTPN7-217ENST00000495688 MAPK8IP1Q9UQF2 711 aa14.78□□□□□ -0.04
PTPN7-217ENST00000495688 CACNA1SQ13698 1873 aa14.78□□□□□ -0.04
PTPN7-217ENST00000495688 MCM7P33993 719 aa14.78□□□□□ -0.04
PTPN7-217ENST00000495688 SMIM5Q71RC9 77 aa14.78□□□□□ -0.04
PTPN7-217ENST00000495688 DUOX1Q9NRD9 1551 aa14.77□□□□□ -0.04
PTPN7-217ENST00000495688 MYH8P13535 1937 aa14.77□□□□□ -0.04
PTPN7-217ENST00000495688 LOC102724428A0A0B4J2F2 783 aa14.77□□□□□ -0.04
PTPN7-217ENST00000495688 SIK1P57059 783 aa14.77□□□□□ -0.04
PTPN7-217ENST00000495688 PARP10Q53GL7 1025 aa14.77□□□□□ -0.04
PTPN7-217ENST00000495688 TMTC3Q6ZXV5 915 aa14.77□□□□□ -0.04
PTPN7-217ENST00000495688 FERMT2Q96AC1 680 aa14.77□□□□□ -0.04
PTPN7-217ENST00000495688 GSDMAQ96QA5 445 aa14.77□□□□□ -0.04
PTPN7-217ENST00000495688 PUF60Q9UHX1 559 aaKnown RBP14.77□□□□□ -0.04
PTPN7-217ENST00000495688 CNTNAP5Q8WYK1 1306 aa14.77□□□□□ -0.05
PTPN7-217ENST00000495688 MFAP3LO75121 409 aa14.77□□□□□ -0.05
PTPN7-217ENST00000495688 ERFEQ4G0M1 354 aa14.77□□□□□ -0.05
PTPN7-217ENST00000495688 GPR161Q8N6U8 529 aaKnown RBP14.77□□□□□ -0.05
PTPN7-217ENST00000495688 ACRBPQ8NEB7 543 aa14.77□□□□□ -0.05
PTPN7-217ENST00000495688 VPS16Q9H269 839 aa14.77□□□□□ -0.05
PTPN7-217ENST00000495688 JAG2Q9Y219 1238 aa14.77□□□□□ -0.05
PTPN7-217ENST00000495688 DOT1LQ8TEK3 1739 aa14.76□□□□□ -0.05
PTPN7-217ENST00000495688 MYH13Q9UKX3 1938 aa14.76□□□□□ -0.05
PTPN7-217ENST00000495688 CYP2D6P10635 497 aa14.76□□□□□ -0.05
PTPN7-217ENST00000495688 ATP2C1P98194 919 aaPredicted RBP14.76□□□□□ -0.05
PTPN7-217ENST00000495688 PPP2R5BQ15173 497 aa14.76□□□□□ -0.05
PTPN7-217ENST00000495688 E2F4Q16254 413 aa14.76□□□□□ -0.05
PTPN7-217ENST00000495688 FAM84BQ96KN1 310 aaPredicted RBP14.76□□□□□ -0.05
PTPN7-217ENST00000495688 PHLPP1O60346 1717 aa14.76□□□□□ -0.05
PTPN7-217ENST00000495688 KRT31Q15323 416 aa14.76□□□□□ -0.05
PTPN7-217ENST00000495688 KCNQ4P56696 695 aa14.75□□□□□ -0.05
PTPN7-217ENST00000495688 ZNF569Q5MCW4 686 aa14.75□□□□□ -0.05
PTPN7-217ENST00000495688 RRAGBQ5VZM2 374 aa14.75□□□□□ -0.05
PTPN7-217ENST00000495688 CDC5LQ99459 802 aaKnown RBP14.75□□□□□ -0.05
PTPN7-217ENST00000495688 BRMS1Q9HCU9 246 aa14.75□□□□□ -0.05
PTPN7-217ENST00000495688 TPM1P09493 284 aa14.75□□□□□ -0.05
PTPN7-217ENST00000495688 NLRP5P59047 1200 aa14.75□□□□□ -0.05
PTPN7-217ENST00000495688 PDXDC2PQ6P474 469 aa14.75□□□□□ -0.05
PTPN7-217ENST00000495688 BICDL1Q6ZP65 573 aa14.75□□□□□ -0.05
PTPN7-217ENST00000495688 ANKRD18AQ8IVF6 992 aa14.75□□□□□ -0.05
PTPN7-217ENST00000495688 CELF1Q92879 486 aaKnown RBP14.75□□□□□ -0.05
PTPN7-217ENST00000495688 BRIP1Q9BX63 1249 aa14.75□□□□□ -0.05
PTPN7-217ENST00000495688 GNL3LQ9NVN8 582 aaKnown RBP14.75□□□□□ -0.05
PTPN7-217ENST00000495688 RBM28Q9NW13 759 aaKnown RBP14.75□□□□□ -0.05
PTPN7-217ENST00000495688 TAB2Q9NYJ8 693 aa14.75□□□□□ -0.05
PTPN7-217ENST00000495688 MINPP1Q9UNW1 487 aa14.75□□□□□ -0.05
PTPN7-217ENST00000495688 N4BP3O15049 544 aa14.74□□□□□ -0.05
PTPN7-217ENST00000495688 ERVK-24P63145 666 aa14.74□□□□□ -0.05
PTPN7-217ENST00000495688 RASGRP4Q8TDF6 673 aa14.74□□□□□ -0.05
PTPN7-217ENST00000495688 GOLGA1Q92805 767 aa14.74□□□□□ -0.05
PTPN7-217ENST00000495688 GDAQ9Y2T3 454 aa14.74□□□□□ -0.05
PTPN7-217ENST00000495688 FILIP1LQ4L180 1135 aa14.74□□□□□ -0.05
PTPN7-217ENST00000495688 CAVIN4Q5BKX8 364 aa14.74□□□□□ -0.05
PTPN7-217ENST00000495688 RASGRP2Q7LDG7 609 aa14.74□□□□□ -0.05
PTPN7-217ENST00000495688 IQUBQ8NA54 791 aa14.74□□□□□ -0.05
PTPN7-217ENST00000495688 CTCFLQ8NI51 663 aaPredicted RBP14.74□□□□□ -0.05
PTPN7-217ENST00000495688 RABGGTAQ92696 567 aa14.74□□□□□ -0.05
PTPN7-217ENST00000495688 CTAGE1Q96RT6 745 aa14.74□□□□□ -0.05
PTPN7-217ENST00000495688 ARFGAP3Q9NP61 516 aa14.74□□□□□ -0.05
PTPN7-217ENST00000495688 KIF5CO60282 957 aa14.73□□□□□ -0.05
PTPN7-217ENST00000495688 FGRP09769 529 aa14.73□□□□□ -0.05
PTPN7-217ENST00000495688 SCG2P13521 617 aa14.73□□□□□ -0.05
PTPN7-217ENST00000495688 PRDX5P30044 214 aa14.73□□□□□ -0.05
PTPN7-217ENST00000495688 GYS2P54840 703 aa14.73□□□□□ -0.05
PTPN7-217ENST00000495688 CHMP4BP1P59074 171 aa14.73□□□□□ -0.05
PTPN7-217ENST00000495688 ST5P78524 1137 aa14.73□□□□□ -0.05
PTPN7-217ENST00000495688 MECOMQ03112 1051 aa14.73□□□□□ -0.05
PTPN7-217ENST00000495688 GPKOWQ92917 476 aaPredicted RBP eCLIP14.73□□□□□ -0.05
PTPN7-217ENST00000495688 NSUN4Q96CB9 384 aaKnown RBP14.73□□□□□ -0.05
PTPN7-217ENST00000495688 FUT8Q9BYC5 575 aa14.73□□□□□ -0.05
PTPN7-217ENST00000495688 DCP1AQ9NPI6 582 aaPredicted RBP14.73□□□□□ -0.05
PTPN7-217ENST00000495688 TFCP2L1Q9NZI6 479 aa14.73□□□□□ -0.05
PTPN7-217ENST00000495688 OAS2P29728 719 aaKnown RBP14.73□□□□□ -0.05
PTPN7-217ENST00000495688 CYP2C19P33261 490 aa14.73□□□□□ -0.05
PTPN7-217ENST00000495688 SLC35F6Q8N357 371 aa14.73□□□□□ -0.05
PTPN7-217ENST00000495688 CCDC24Q8N4L8 307 aa14.73□□□□□ -0.05
PTPN7-217ENST00000495688 UBXN6Q9BZV1 441 aa14.73□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 108.2 ms