RNA–Protein interactions for RNA: ENST00000493455.6

HPS4-216, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 3

Gene HPS4, Length 986 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-216ENST00000493455 WDR18Q9BV38 432 aa18.48■□□□□ 0.55
HPS4-216ENST00000493455 TOP1P11387 765 aaKnown RBP18.47■□□□□ 0.55
HPS4-216ENST00000493455 SAMD1Q6SPF0 538 aaPredicted RBP18.47■□□□□ 0.55
HPS4-216ENST00000493455 RASGRP2Q7LDG7 609 aa18.47■□□□□ 0.55
HPS4-216ENST00000493455 DGKHQ86XP1 1220 aa18.47■□□□□ 0.55
HPS4-216ENST00000493455 IGDCC4Q8TDY8 1250 aa18.47■□□□□ 0.55
HPS4-216ENST00000493455 CCDC102AQ96A19 550 aa18.47■□□□□ 0.55
HPS4-216ENST00000493455 CAPNS2Q96L46 248 aa18.47■□□□□ 0.55
HPS4-216ENST00000493455 MYL10Q9BUA6 226 aa18.47■□□□□ 0.55
HPS4-216ENST00000493455 TBC1D2Q9BYX2 928 aa18.47■□□□□ 0.55
HPS4-216ENST00000493455 LY9Q9HBG7 655 aa18.47■□□□□ 0.55
HPS4-216ENST00000493455 GOPCQ9HD26 462 aa18.47■□□□□ 0.55
HPS4-216ENST00000493455 TMOD4Q9NZQ9 345 aa18.47■□□□□ 0.55
HPS4-216ENST00000493455 WDR19Q8NEZ3 1342 aa18.47■□□□□ 0.55
HPS4-216ENST00000493455 RASSF10A6NK89 507 aa18.46■□□□□ 0.55
HPS4-216ENST00000493455 AOC2O75106 756 aa18.46■□□□□ 0.55
HPS4-216ENST00000493455 ZBTB48P10074 688 aaPredicted RBP18.46■□□□□ 0.55
HPS4-216ENST00000493455 BACE1P56817 501 aa18.46■□□□□ 0.55
HPS4-216ENST00000493455 APOBRQ0VD83 1088 aa18.46■□□□□ 0.55
HPS4-216ENST00000493455 SNAPC2Q13487 334 aa18.46■□□□□ 0.55
HPS4-216ENST00000493455 RABEP1Q15276 862 aa18.46■□□□□ 0.55
HPS4-216ENST00000493455 USP17L2Q6R6M4 530 aa18.46■□□□□ 0.55
HPS4-216ENST00000493455 PNMA1Q8ND90 353 aa18.46■□□□□ 0.55
HPS4-216ENST00000493455 NUP133Q8WUM0 1156 aa18.46■□□□□ 0.55
HPS4-216ENST00000493455 TTC14Q96N46 770 aa18.46■□□□□ 0.55
HPS4-216ENST00000493455 TMX2Q9Y320 296 aa18.46■□□□□ 0.55
HPS4-216ENST00000493455 CCL15-CCL14A0A0B4J2E2 113 aa18.45■□□□□ 0.54
HPS4-216ENST00000493455 KLF18A0A0U1RQI7 1052 aa18.45■□□□□ 0.54
HPS4-216ENST00000493455 FAM155AB1AL88 458 aaPredicted RBP18.45■□□□□ 0.54
HPS4-216ENST00000493455 RXRAP19793 462 aa18.45■□□□□ 0.54
HPS4-216ENST00000493455 GTF2A2P52657 109 aa18.45■□□□□ 0.54
HPS4-216ENST00000493455 USP14P54578 494 aa18.45■□□□□ 0.54
HPS4-216ENST00000493455 CCL15Q16663 113 aa18.45■□□□□ 0.54
HPS4-216ENST00000493455 CCDC96Q2M329 555 aa18.45■□□□□ 0.54
HPS4-216ENST00000493455 SLFN13Q68D06 897 aa18.45■□□□□ 0.54
HPS4-216ENST00000493455 CATIPQ7Z7H3 387 aa18.45■□□□□ 0.54
HPS4-216ENST00000493455 CCDC144CPQ8IYA2 1237 aa18.45■□□□□ 0.54
HPS4-216ENST00000493455 HHIPL1Q96JK4 782 aa18.45■□□□□ 0.54
HPS4-216ENST00000493455 NUP88Q99567 741 aaPredicted RBP18.45■□□□□ 0.54
HPS4-216ENST00000493455 KIAA1683Q9H0B3 1180 aa18.45■□□□□ 0.54
HPS4-216ENST00000493455 VCPKMTQ9H867 229 aa18.45■□□□□ 0.54
HPS4-216ENST00000493455 KCNH4Q9UQ05 1017 aa18.45■□□□□ 0.54
HPS4-216ENST00000493455 LOC285556D6RIA3 1793 aa18.45■□□□□ 0.54
HPS4-216ENST00000493455 C19orf81C9J6K1 198 aa18.44■□□□□ 0.54
HPS4-216ENST00000493455 F5H6K3 240 aa18.44■□□□□ 0.54
HPS4-216ENST00000493455 CXCL11O14625 94 aa18.44■□□□□ 0.54
HPS4-216ENST00000493455 NDUFB10O96000 172 aa18.44■□□□□ 0.54
HPS4-216ENST00000493455 AK2P54819 239 aa18.44■□□□□ 0.54
HPS4-216ENST00000493455 KLRC3Q07444 240 aa18.44■□□□□ 0.54
HPS4-216ENST00000493455 TOB2Q14106 344 aaPredicted RBP18.44■□□□□ 0.54
HPS4-216ENST00000493455 KIAA1755Q5JYT7 1200 aa18.44■□□□□ 0.54
HPS4-216ENST00000493455 SYNE3Q6ZMZ3 975 aa18.44■□□□□ 0.54
HPS4-216ENST00000493455 IL17RAQ96F46 866 aa18.44■□□□□ 0.54
HPS4-216ENST00000493455 ZIC5Q96T25 663 aa18.44■□□□□ 0.54
HPS4-216ENST00000493455 EMILIN3Q9NT22 766 aa18.44■□□□□ 0.54
HPS4-216ENST00000493455 SLC12A7Q9Y666 1083 aa18.44■□□□□ 0.54
HPS4-216ENST00000493455 FRMPD2Q68DX3 1309 aaPredicted RBP18.44■□□□□ 0.54
HPS4-216ENST00000493455 A0A0G2JLL6 359 aaPredicted RBP18.43■□□□□ 0.54
HPS4-216ENST00000493455 CETPP11597 493 aa18.43■□□□□ 0.54
HPS4-216ENST00000493455 LIFRP42702 1097 aa18.43■□□□□ 0.54
HPS4-216ENST00000493455 VEGFBP49765 207 aa18.43■□□□□ 0.54
HPS4-216ENST00000493455 KIF23Q02241 960 aaPredicted RBP18.43■□□□□ 0.54
HPS4-216ENST00000493455 STK3Q13188 491 aa18.43■□□□□ 0.54
HPS4-216ENST00000493455 FAM83BQ5T0W9 1011 aa18.43■□□□□ 0.54
HPS4-216ENST00000493455 PRRT2Q7Z6L0 340 aaPredicted RBP18.43■□□□□ 0.54
HPS4-216ENST00000493455 MICU3Q86XE3 530 aa18.43■□□□□ 0.54
HPS4-216ENST00000493455 ZNF654Q8IZM8 581 aa18.43■□□□□ 0.54
HPS4-216ENST00000493455 MKL1Q969V6 931 aa18.43■□□□□ 0.54
HPS4-216ENST00000493455 MTA3Q9BTC8 594 aa18.43■□□□□ 0.54
HPS4-216ENST00000493455 TANGO6Q9C0B7 1094 aa18.43■□□□□ 0.54
HPS4-216ENST00000493455 BRPF3Q9ULD4 1205 aa18.43■□□□□ 0.54
HPS4-216ENST00000493455 WDR33Q9C0J8 1336 aaKnown RBP18.43■□□□□ 0.54
HPS4-216ENST00000493455 GOLGA8BA8MQT2 603 aa18.42■□□□□ 0.54
HPS4-216ENST00000493455 ST18O60284 1047 aa18.42■□□□□ 0.54
HPS4-216ENST00000493455 GOLGA8HP0CJ92 632 aa18.42■□□□□ 0.54
HPS4-216ENST00000493455 VCAM1P19320 739 aa18.42■□□□□ 0.54
HPS4-216ENST00000493455 SLC1A4P43007 532 aa18.42■□□□□ 0.54
HPS4-216ENST00000493455 IKQ13123 557 aaPredicted RBP18.42■□□□□ 0.54
HPS4-216ENST00000493455 TREML2Q5T2D2 321 aa18.42■□□□□ 0.54
HPS4-216ENST00000493455 KCTD1Q719H9 257 aa18.42■□□□□ 0.54
HPS4-216ENST00000493455 TMTC2Q8N394 836 aa18.42■□□□□ 0.54
HPS4-216ENST00000493455 ANKS1AQ92625 1134 aa18.42■□□□□ 0.54
HPS4-216ENST00000493455 GPCPD1Q9NPB8 672 aa18.42■□□□□ 0.54
HPS4-216ENST00000493455 MANSC4A6NHS7 340 aaPredicted RBP18.41■□□□□ 0.54
HPS4-216ENST00000493455 NOVP48745 357 aa18.41■□□□□ 0.54
HPS4-216ENST00000493455 FASTKD5Q7L8L6 764 aaKnown RBP18.41■□□□□ 0.54
HPS4-216ENST00000493455 GMCL1P1Q8NEA9 526 aa18.41■□□□□ 0.54
HPS4-216ENST00000493455 BRI3BPQ8WY22 251 aa18.41■□□□□ 0.54
HPS4-216ENST00000493455 MS4A4AQ96JQ5 239 aa18.41■□□□□ 0.54
HPS4-216ENST00000493455 RPAP3Q9H6T3 665 aaPredicted RBP18.41■□□□□ 0.54
HPS4-216ENST00000493455 GOLGA8AA7E2F4 631 aa18.4■□□□□ 0.54
HPS4-216ENST00000493455 ZBTB43O43298 467 aa18.4■□□□□ 0.54
HPS4-216ENST00000493455 PDHBP11177 359 aa18.4■□□□□ 0.54
HPS4-216ENST00000493455 BMP3P12645 472 aa18.4■□□□□ 0.54
HPS4-216ENST00000493455 NOGQ13253 232 aa18.4■□□□□ 0.54
HPS4-216ENST00000493455 ANKRD1Q15327 319 aa18.4■□□□□ 0.54
HPS4-216ENST00000493455 SH3D19Q5HYK7 790 aa18.4■□□□□ 0.54
HPS4-216ENST00000493455 APOA5Q6Q788 366 aa18.4■□□□□ 0.54
HPS4-216ENST00000493455 SGMS1Q86VZ5 419 aa18.4■□□□□ 0.54
HPS4-216ENST00000493455 PROCA1Q8NCQ7 364 aaPredicted RBP18.4■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms