RNA–Protein interactions for RNA: ENST00000488146.5

DEPDC1-203, Transcript of DEP domain containing 1, humanhuman

TSL 2

Gene DEPDC1, Length 2,658 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1-203ENST00000488146 KMT5BQ4FZB7 885 aa3.39□□□□□ -1.87
DEPDC1-203ENST00000488146 OLFM4Q6UX06 510 aa3.39□□□□□ -1.87
DEPDC1-203ENST00000488146 TEX2Q8IWB9 1127 aa3.39□□□□□ -1.87
DEPDC1-203ENST00000488146 MAGEB6Q8N7X4 407 aa3.39□□□□□ -1.87
DEPDC1-203ENST00000488146 ADAM32Q8TC27 787 aa3.39□□□□□ -1.87
DEPDC1-203ENST00000488146 PPIL4Q8WUA2 492 aaKnown RBP eCLIP3.39□□□□□ -1.87
DEPDC1-203ENST00000488146 LPIN2Q92539 896 aa3.39□□□□□ -1.87
DEPDC1-203ENST00000488146 COA7Q96BR5 231 aa3.39□□□□□ -1.87
DEPDC1-203ENST00000488146 C11orf49Q9H6J7 331 aa3.39□□□□□ -1.87
DEPDC1-203ENST00000488146 LMCD1Q9NZU5 365 aa3.39□□□□□ -1.87
DEPDC1-203ENST00000488146 CEP126Q9P2H0 1117 aa3.39□□□□□ -1.87
DEPDC1-203ENST00000488146 AFG3L2Q9Y4W6 797 aa3.39□□□□□ -1.87
DEPDC1-203ENST00000488146 PCDHB3Q9Y5E6 796 aa3.39□□□□□ -1.87
DEPDC1-203ENST00000488146 PTCH2Q9Y6C5 1203 aa3.39□□□□□ -1.87
DEPDC1-203ENST00000488146 PARP14Q460N5 1801 aa3.39□□□□□ -1.87
DEPDC1-203ENST00000488146 CDK5RAP2Q96SN8 1893 aa3.39□□□□□ -1.87
DEPDC1-203ENST00000488146 ZNF521Q96K83 1311 aa3.39□□□□□ -1.87
DEPDC1-203ENST00000488146 BTBD19C9JJ37 291 aa3.39□□□□□ -1.87
DEPDC1-203ENST00000488146 DNM1LO00429 736 aa3.39□□□□□ -1.87
DEPDC1-203ENST00000488146 ACTN4O43707 911 aaKnown RBP3.39□□□□□ -1.87
DEPDC1-203ENST00000488146 CST5P28325 142 aaPredicted RBP3.39□□□□□ -1.87
DEPDC1-203ENST00000488146 KCNJ4P48050 445 aa3.39□□□□□ -1.87
DEPDC1-203ENST00000488146 SLC4A3P48751 1232 aa3.39□□□□□ -1.87
DEPDC1-203ENST00000488146 SLFNL1Q499Z3 407 aa3.39□□□□□ -1.87
DEPDC1-203ENST00000488146 BRICD5Q6PL45 260 aa3.39□□□□□ -1.87
DEPDC1-203ENST00000488146 CERS5Q8N5B7 392 aa3.39□□□□□ -1.87
DEPDC1-203ENST00000488146 FAM160A2Q8N612 972 aaPredicted RBP3.39□□□□□ -1.87
DEPDC1-203ENST00000488146 PLPP7Q8NBV4 271 aa3.39□□□□□ -1.87
DEPDC1-203ENST00000488146 FAM89AQ96GI7 184 aa3.39□□□□□ -1.87
DEPDC1-203ENST00000488146 TOX2Q96NM4 488 aa3.39□□□□□ -1.87
DEPDC1-203ENST00000488146 ZIC5Q96T25 663 aa3.39□□□□□ -1.87
DEPDC1-203ENST00000488146 PTPN18Q99952 460 aa3.39□□□□□ -1.87
DEPDC1-203ENST00000488146 SLC5A4Q9NY91 659 aa3.39□□□□□ -1.87
DEPDC1-203ENST00000488146 MAP3K2Q9Y2U5 619 aa3.39□□□□□ -1.87
DEPDC1-203ENST00000488146 MROH7Q68CQ1 1323 aa3.38□□□□□ -1.87
DEPDC1-203ENST00000488146 SFI1A8K8P3 1242 aa3.38□□□□□ -1.87
DEPDC1-203ENST00000488146 PHF20L1A8MW92 1017 aa3.38□□□□□ -1.87
DEPDC1-203ENST00000488146 PFKMP08237 780 aa3.38□□□□□ -1.87
DEPDC1-203ENST00000488146 USP14P54578 494 aa3.38□□□□□ -1.87
DEPDC1-203ENST00000488146 CCNA1P78396 465 aa3.38□□□□□ -1.87
DEPDC1-203ENST00000488146 PKN1Q16512 942 aa3.38□□□□□ -1.87
DEPDC1-203ENST00000488146 CCDC57Q2TAC2 916 aa3.38□□□□□ -1.87
DEPDC1-203ENST00000488146 NBPF9Q3BBW0 867 aa3.38□□□□□ -1.87
DEPDC1-203ENST00000488146 ATF7IPQ6VMQ6 1270 aa3.38□□□□□ -1.87
DEPDC1-203ENST00000488146 TDHQ8IZJ6 230 aa3.38□□□□□ -1.87
DEPDC1-203ENST00000488146 ATXN2LQ8WWM7 1075 aaKnown RBP3.38□□□□□ -1.87
DEPDC1-203ENST00000488146 THAP11Q96EK4 314 aa3.38□□□□□ -1.87
DEPDC1-203ENST00000488146 APBA2Q99767 749 aa3.38□□□□□ -1.87
DEPDC1-203ENST00000488146 NUDT12Q9BQG2 462 aa3.38□□□□□ -1.87
DEPDC1-203ENST00000488146 ARHGAP39Q9C0H5 1083 aa3.38□□□□□ -1.87
DEPDC1-203ENST00000488146 XRN2Q9H0D6 950 aaKnown RBP eCLIP3.38□□□□□ -1.87
DEPDC1-203ENST00000488146 GREM2Q9H772 168 aa3.38□□□□□ -1.87
DEPDC1-203ENST00000488146 KIAA1522Q9P206 1035 aaPredicted RBP3.38□□□□□ -1.87
DEPDC1-203ENST00000488146 SEPT3Q9UH03 358 aa3.38□□□□□ -1.87
DEPDC1-203ENST00000488146 AKAP2Q9Y2D5 859 aa3.38□□□□□ -1.87
DEPDC1-203ENST00000488146 NAV1Q8NEY1 1877 aa3.38□□□□□ -1.87
DEPDC1-203ENST00000488146 GPR75-ASB3A0A0A6YYF3 556 aa3.38□□□□□ -1.87
DEPDC1-203ENST00000488146 H0YGN5 161 aa3.38□□□□□ -1.87
DEPDC1-203ENST00000488146 KIAA0355O15063 1070 aa3.38□□□□□ -1.87
DEPDC1-203ENST00000488146 STRNO43815 780 aa3.38□□□□□ -1.87
DEPDC1-203ENST00000488146 PDE8BO95263 885 aa3.38□□□□□ -1.87
DEPDC1-203ENST00000488146 PARNO95453 639 aaKnown RBP3.38□□□□□ -1.87
DEPDC1-203ENST00000488146 EGFRP00533 1210 aa3.38□□□□□ -1.87
DEPDC1-203ENST00000488146 UQCRFS1P1P0C7P4 283 aa3.38□□□□□ -1.87
DEPDC1-203ENST00000488146 RFC2P35250 354 aa3.38□□□□□ -1.87
DEPDC1-203ENST00000488146 IL15P40933 162 aaPredicted RBP3.38□□□□□ -1.87
DEPDC1-203ENST00000488146 RGS2P41220 211 aa3.38□□□□□ -1.87
DEPDC1-203ENST00000488146 APOBEC3HQ6NTF7 200 aaKnown RBP3.38□□□□□ -1.87
DEPDC1-203ENST00000488146 TATDN1Q6P1N9 297 aa3.38□□□□□ -1.87
DEPDC1-203ENST00000488146 FOXP4Q8IVH2 680 aaPredicted RBP3.38□□□□□ -1.87
DEPDC1-203ENST00000488146 PNMA1Q8ND90 353 aa3.38□□□□□ -1.87
DEPDC1-203ENST00000488146 RAET1EQ8TD07 263 aa3.38□□□□□ -1.87
DEPDC1-203ENST00000488146 FAM84BQ96KN1 310 aaPredicted RBP3.38□□□□□ -1.87
DEPDC1-203ENST00000488146 CCDC85AQ96PX6 553 aaPredicted RBP3.38□□□□□ -1.87
DEPDC1-203ENST00000488146 ZNF408Q9H9D4 720 aa3.38□□□□□ -1.87
DEPDC1-203ENST00000488146 COPRSQ9NQ92 184 aa3.38□□□□□ -1.87
DEPDC1-203ENST00000488146 RABGAP1Q9Y3P9 1069 aa3.38□□□□□ -1.87
DEPDC1-203ENST00000488146 ARID4AP29374 1257 aaPredicted RBP3.37□□□□□ -1.87
DEPDC1-203ENST00000488146 GTF2IP78347 998 aa3.37□□□□□ -1.87
DEPDC1-203ENST00000488146 PTPN11Q06124 597 aaPredicted RBP3.37□□□□□ -1.87
DEPDC1-203ENST00000488146 DCTN1Q14203 1278 aa3.37□□□□□ -1.87
DEPDC1-203ENST00000488146 MVPQ14764 893 aaKnown RBP3.37□□□□□ -1.87
DEPDC1-203ENST00000488146 LAPTM4AQ15012 233 aa3.37□□□□□ -1.87
DEPDC1-203ENST00000488146 AGERQ15109 404 aa3.37□□□□□ -1.87
DEPDC1-203ENST00000488146 TJAP1Q5JTD0 557 aa3.37□□□□□ -1.87
DEPDC1-203ENST00000488146 RASIP1Q5U651 963 aa3.37□□□□□ -1.87
DEPDC1-203ENST00000488146 RCSD1Q6JBY9 416 aa3.37□□□□□ -1.87
DEPDC1-203ENST00000488146 CCDC129Q6ZRS4 1044 aa3.37□□□□□ -1.87
DEPDC1-203ENST00000488146 FAM200AQ8TCP9 573 aa3.37□□□□□ -1.87
DEPDC1-203ENST00000488146 U2AF1L4Q8WU68 220 aaKnown RBP3.37□□□□□ -1.87
DEPDC1-203ENST00000488146 UPF3AQ9H1J1 476 aaKnown RBP3.37□□□□□ -1.87
DEPDC1-203ENST00000488146 SEC31BQ9NQW1 1179 aa3.37□□□□□ -1.87
DEPDC1-203ENST00000488146 PRDM6Q9NQX0 595 aa3.37□□□□□ -1.87
DEPDC1-203ENST00000488146 PHF24Q9UPV7 400 aa3.37□□□□□ -1.87
DEPDC1-203ENST00000488146 Q9Y3F1 56 aa3.37□□□□□ -1.87
DEPDC1-203ENST00000488146 MYH2Q9UKX2 1941 aa3.37□□□□□ -1.87
DEPDC1-203ENST00000488146 MROH7-TTC4A0A0A0MT08 1334 aa3.37□□□□□ -1.87
DEPDC1-203ENST00000488146 SHTN1A0MZ66 631 aa3.37□□□□□ -1.87
DEPDC1-203ENST00000488146 FSD2A1L4K1 749 aa3.37□□□□□ -1.87
DEPDC1-203ENST00000488146 PDHXO00330 501 aa3.37□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms