RNA–Protein interactions for RNA: ENST00000483868.5

TPRA1-208, Transcript of transmembrane protein adipocyte associated 1, human

TSL 5

Gene TPRA1, Length 1,720 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TPRA1-208	ENST00000483868	RGMB	Q6NW40	437 aa		32.4	■■■□□ 2.78
TPRA1-208	ENST00000483868	NFXL1	Q6ZNB6	911 aa		32.4	■■■□□ 2.78
TPRA1-208	ENST00000483868	KAT14	Q9H8E8	782 aa		32.4	■■■□□ 2.78
TPRA1-208	ENST00000483868	AS3MT	Q9HBK9	375 aa		32.4	■■■□□ 2.78
TPRA1-208	ENST00000483868	PPIL2	Q13356	520 aa		32.4	■■■□□ 2.78
TPRA1-208	ENST00000483868	PNMA1	Q8ND90	353 aa		32.4	■■■□□ 2.78
TPRA1-208	ENST00000483868	FEZ1	Q99689	392 aa		32.4	■■■□□ 2.78
TPRA1-208	ENST00000483868	CREBZF	Q9NS37	354 aa		32.4	■■■□□ 2.78
TPRA1-208	ENST00000483868	PCNT	O95613	3336 aa		32.4	■■■□□ 2.78
TPRA1-208	ENST00000483868	USP17L10	C9JJH3	530 aa		32.39	■■■□□ 2.78
TPRA1-208	ENST00000483868	BACE1	P56817	501 aa		32.39	■■■□□ 2.78
TPRA1-208	ENST00000483868	RASAL3	Q86YV0	1011 aa		32.39	■■■□□ 2.78
TPRA1-208	ENST00000483868	RAD21	O60216	631 aa		32.38	■■■□□ 2.77
TPRA1-208	ENST00000483868	SPICE1	Q8N0Z3	855 aa		32.38	■■■□□ 2.77
TPRA1-208	ENST00000483868	KIAA1683	Q9H0B3	1180 aa		32.38	■■■□□ 2.77
TPRA1-208	ENST00000483868	TPCN1	Q9ULQ1	816 aa		32.38	■■■□□ 2.77
TPRA1-208	ENST00000483868	KLF18	A0A0U1RQI7	1052 aa		32.37	■■■□□ 2.77
TPRA1-208	ENST00000483868	CCDC69	A6NI79	296 aa		32.37	■■■□□ 2.77
TPRA1-208	ENST00000483868	RXRA	P19793	462 aa		32.37	■■■□□ 2.77
TPRA1-208	ENST00000483868	PPP4R3B	Q5MIZ7	849 aa		32.37	■■■□□ 2.77
TPRA1-208	ENST00000483868	SPRYD7	Q5W111	196 aa		32.37	■■■□□ 2.77
TPRA1-208	ENST00000483868	TMTC2	Q8N394	836 aa		32.37	■■■□□ 2.77
TPRA1-208	ENST00000483868	TSHZ2	Q9NRE2	1034 aa		32.37	■■■□□ 2.77
TPRA1-208	ENST00000483868	EMILIN3	Q9NT22	766 aa		32.37	■■■□□ 2.77
TPRA1-208	ENST00000483868		F5H6K3	240 aa		32.37	■■■□□ 2.77
TPRA1-208	ENST00000483868	HMGCS2	P54868	508 aa		32.37	■■■□□ 2.77
TPRA1-208	ENST00000483868	KLRC3	Q07444	240 aa		32.37	■■■□□ 2.77
TPRA1-208	ENST00000483868	APOA5	Q6Q788	366 aa		32.37	■■■□□ 2.77
TPRA1-208	ENST00000483868	ZNF654	Q8IZM8	581 aa		32.37	■■■□□ 2.77
TPRA1-208	ENST00000483868	KCNH4	Q9UQ05	1017 aa		32.37	■■■□□ 2.77
TPRA1-208	ENST00000483868	PTPRF	P10586	1907 aa		32.36	■■■□□ 2.77
TPRA1-208	ENST00000483868	TROAP	Q12815	778 aa		32.36	■■■□□ 2.77
TPRA1-208	ENST00000483868	NDUFB10	O96000	172 aa		32.35	■■■□□ 2.77
TPRA1-208	ENST00000483868	TBC1D2	Q9BYX2	928 aa		32.35	■■■□□ 2.77
TPRA1-208	ENST00000483868	VCPKMT	Q9H867	229 aa		32.35	■■■□□ 2.77
TPRA1-208	ENST00000483868	NAP1L2	Q9ULW6	460 aa	Predicted RBP	32.35	■■■□□ 2.77
TPRA1-208	ENST00000483868	SLC12A7	Q9Y666	1083 aa		32.35	■■■□□ 2.77
TPRA1-208	ENST00000483868	FAM155A	B1AL88	458 aa	Predicted RBP	32.34	■■■□□ 2.77
TPRA1-208	ENST00000483868	ST18	O60284	1047 aa		32.34	■■■□□ 2.77
TPRA1-208	ENST00000483868	EVC	P57679	992 aa		32.34	■■■□□ 2.77
TPRA1-208	ENST00000483868	NUP88	Q99567	741 aa	Predicted RBP	32.34	■■■□□ 2.77
TPRA1-208	ENST00000483868	LARGE1	O95461	756 aa		32.34	■■■□□ 2.77
TPRA1-208	ENST00000483868	CYP4F22	Q6NT55	531 aa		32.34	■■■□□ 2.77
TPRA1-208	ENST00000483868	CATIP	Q7Z7H3	387 aa		32.34	■■■□□ 2.77
TPRA1-208	ENST00000483868	MICU3	Q86XE3	530 aa		32.34	■■■□□ 2.77
TPRA1-208	ENST00000483868	CCDC144CP	Q8IYA2	1237 aa		32.34	■■■□□ 2.77
TPRA1-208	ENST00000483868	GMCL1P1	Q8NEA9	526 aa		32.34	■■■□□ 2.77
TPRA1-208	ENST00000483868	HHIPL1	Q96JK4	782 aa		32.34	■■■□□ 2.77
TPRA1-208	ENST00000483868	SH2D4A	Q9H788	454 aa		32.34	■■■□□ 2.77
TPRA1-208	ENST00000483868	HPS5	Q9UPZ3	1129 aa		32.34	■■■□□ 2.77
TPRA1-208	ENST00000483868	CXCL11	O14625	94 aa		32.33	■■■□□ 2.77
TPRA1-208	ENST00000483868	SLC10A3	P09131	477 aa		32.33	■■■□□ 2.77
TPRA1-208	ENST00000483868	PDHB	P11177	359 aa		32.33	■■■□□ 2.77
TPRA1-208	ENST00000483868	SLFN13	Q68D06	897 aa		32.33	■■■□□ 2.77
TPRA1-208	ENST00000483868	NUP133	Q8WUM0	1156 aa		32.33	■■■□□ 2.77
TPRA1-208	ENST00000483868	MS4A4A	Q96JQ5	239 aa		32.33	■■■□□ 2.77
TPRA1-208	ENST00000483868	CEP350	Q5VT06	3117 aa		32.32	■■■□□ 2.77
TPRA1-208	ENST00000483868		A0A0G2JLL6	359 aa	Predicted RBP	32.32	■■■□□ 2.76
TPRA1-208	ENST00000483868	PDIA3	P30101	505 aa	Known RBP	32.32	■■■□□ 2.76
TPRA1-208	ENST00000483868	ANKRD1	Q15327	319 aa		32.32	■■■□□ 2.76
TPRA1-208	ENST00000483868	USP17L2	Q6R6M4	530 aa		32.32	■■■□□ 2.76
TPRA1-208	ENST00000483868	PRRT2	Q7Z6L0	340 aa	Predicted RBP	32.32	■■■□□ 2.76
TPRA1-208	ENST00000483868	GOPC	Q9HD26	462 aa		32.32	■■■□□ 2.76
TPRA1-208	ENST00000483868	SYNPO2	Q9UMS6	1093 aa		32.32	■■■□□ 2.76
TPRA1-208	ENST00000483868	ZBTB48	P10074	688 aa	Predicted RBP	32.31	■■■□□ 2.76
TPRA1-208	ENST00000483868	C1QTNF8	P60827	252 aa		32.31	■■■□□ 2.76
TPRA1-208	ENST00000483868	GRM1	Q13255	1194 aa		32.31	■■■□□ 2.76
TPRA1-208	ENST00000483868	MOGS	Q13724	837 aa		32.31	■■■□□ 2.76
TPRA1-208	ENST00000483868	SH3D19	Q5HYK7	790 aa		32.31	■■■□□ 2.76
TPRA1-208	ENST00000483868	PAXIP1	Q6ZW49	1069 aa	Predicted RBP	32.31	■■■□□ 2.76
TPRA1-208	ENST00000483868	RASSF10	A6NK89	507 aa		32.31	■■■□□ 2.76
TPRA1-208	ENST00000483868	GOLGA8B	A8MQT2	603 aa		32.31	■■■□□ 2.76
TPRA1-208	ENST00000483868	C19orf81	C9J6K1	198 aa		32.31	■■■□□ 2.76
TPRA1-208	ENST00000483868	STK3	Q13188	491 aa		32.31	■■■□□ 2.76
TPRA1-208	ENST00000483868	ME3	Q16798	604 aa		32.31	■■■□□ 2.76
TPRA1-208	ENST00000483868	SNHG28	P0DPA3	235 aa		32.3	■■■□□ 2.76
TPRA1-208	ENST00000483868	USP14	P54578	494 aa		32.3	■■■□□ 2.76
TPRA1-208	ENST00000483868	DEFB115	Q30KQ5	88 aa		32.3	■■■□□ 2.76
TPRA1-208	ENST00000483868	ZIC5	Q96T25	663 aa		32.3	■■■□□ 2.76
TPRA1-208	ENST00000483868	FRMPD2	Q68DX3	1309 aa	Predicted RBP	32.3	■■■□□ 2.76
TPRA1-208	ENST00000483868	ZBTB43	O43298	467 aa		32.29	■■■□□ 2.76
TPRA1-208	ENST00000483868	GOLGA8H	P0CJ92	632 aa		32.29	■■■□□ 2.76
TPRA1-208	ENST00000483868	VCAM1	P19320	739 aa		32.29	■■■□□ 2.76
TPRA1-208	ENST00000483868	SNAPC2	Q13487	334 aa		32.29	■■■□□ 2.76
TPRA1-208	ENST00000483868	LIMCH1	Q9UPQ0	1083 aa		32.29	■■■□□ 2.76
TPRA1-208	ENST00000483868	DDAH1	O94760	285 aa		32.29	■■■□□ 2.76
TPRA1-208	ENST00000483868	KCTD1	Q719H9	257 aa		32.29	■■■□□ 2.76
TPRA1-208	ENST00000483868	STAG2	Q8N3U4	1231 aa		32.29	■■■□□ 2.76
TPRA1-208	ENST00000483868	C12orf42	Q96LP6	360 aa		32.29	■■■□□ 2.76
TPRA1-208	ENST00000483868	SLC1A4	P43007	532 aa		32.28	■■■□□ 2.76
TPRA1-208	ENST00000483868	CCT2	P78371	535 aa	Known RBP	32.28	■■■□□ 2.76
TPRA1-208	ENST00000483868	FAM83B	Q5T0W9	1011 aa		32.28	■■■□□ 2.76
TPRA1-208	ENST00000483868	TREML2	Q5T2D2	321 aa		32.28	■■■□□ 2.76
TPRA1-208	ENST00000483868	SYNE3	Q6ZMZ3	975 aa		32.28	■■■□□ 2.76
TPRA1-208	ENST00000483868	GADL1	Q6ZQY3	521 aa		32.28	■■■□□ 2.76
TPRA1-208	ENST00000483868	CCDC102A	Q96A19	550 aa		32.28	■■■□□ 2.76
TPRA1-208	ENST00000483868	ZNF274	Q96GC6	653 aa	Predicted RBP	32.28	■■■□□ 2.76
TPRA1-208	ENST00000483868	GMCL1	Q96IK5	515 aa		32.28	■■■□□ 2.76
TPRA1-208	ENST00000483868	NCOA5	Q9HCD5	579 aa	Known RBP	32.28	■■■□□ 2.76
TPRA1-208	ENST00000483868	FAM217B	Q9NTX9	383 aa	Predicted RBP	32.28	■■■□□ 2.76

Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms