RNA–Protein interactions for RNA: ENST00000483021.5

R3HDM1-215, Transcript of R3H domain containing 1, humanhuman

TSL 3

Gene R3HDM1, Length 539 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-215ENST00000483021 CCDC17Q96LX7 622 aa23.46■■□□□ 1.35
R3HDM1-215ENST00000483021 HOXC10Q9NYD6 342 aa23.46■■□□□ 1.35
R3HDM1-215ENST00000483021 BTBD7Q9P203 1132 aa23.46■■□□□ 1.35
R3HDM1-215ENST00000483021 PTPREP23469 700 aa23.45■■□□□ 1.34
R3HDM1-215ENST00000483021 COG2Q14746 738 aa23.45■■□□□ 1.34
R3HDM1-215ENST00000483021 CCL14Q16627 93 aa23.45■■□□□ 1.34
R3HDM1-215ENST00000483021 SLFNL1Q499Z3 407 aa23.45■■□□□ 1.34
R3HDM1-215ENST00000483021 C12orf60Q5U649 245 aa23.45■■□□□ 1.34
R3HDM1-215ENST00000483021 DYNLL2Q96FJ2 89 aa23.45■■□□□ 1.34
R3HDM1-215ENST00000483021 GPATCH3Q96I76 525 aa23.45■■□□□ 1.34
R3HDM1-215ENST00000483021 TANGO6Q9C0B7 1094 aa23.45■■□□□ 1.34
R3HDM1-215ENST00000483021 PRO3102Q9H379 93 aa23.45■■□□□ 1.34
R3HDM1-215ENST00000483021 C11orf49Q9H6J7 331 aa23.45■■□□□ 1.34
R3HDM1-215ENST00000483021 ECHDC1Q9NTX5 307 aa23.45■■□□□ 1.34
R3HDM1-215ENST00000483021 SZT2Q5T011 3432 aa23.45■■□□□ 1.34
R3HDM1-215ENST00000483021 ICA1Q05084 483 aa23.44■■□□□ 1.34
R3HDM1-215ENST00000483021 GRB14Q14449 540 aa23.44■■□□□ 1.34
R3HDM1-215ENST00000483021 A0A1W2PPC1 479 aa23.43■■□□□ 1.34
R3HDM1-215ENST00000483021 SMARCA5O60264 1052 aaPredicted RBP23.43■■□□□ 1.34
R3HDM1-215ENST00000483021 HOXC6P09630 235 aa23.43■■□□□ 1.34
R3HDM1-215ENST00000483021 AKR1B1P15121 316 aa23.43■■□□□ 1.34
R3HDM1-215ENST00000483021 MNX1P50219 401 aaPredicted RBP23.43■■□□□ 1.34
R3HDM1-215ENST00000483021 MFSD14CQ5VZR4 134 aa23.43■■□□□ 1.34
R3HDM1-215ENST00000483021 C16orf86Q6ZW13 317 aa23.43■■□□□ 1.34
R3HDM1-215ENST00000483021 MB21D1Q8N884 522 aa23.43■■□□□ 1.34
R3HDM1-215ENST00000483021 TMX2Q9Y320 296 aa23.43■■□□□ 1.34
R3HDM1-215ENST00000483021 SLC4A4Q9Y6R1 1079 aa23.43■■□□□ 1.34
R3HDM1-215ENST00000483021 USP17L12C9JPN9 530 aa23.42■■□□□ 1.34
R3HDM1-215ENST00000483021 USP17L21D6R901 530 aa23.42■■□□□ 1.34
R3HDM1-215ENST00000483021 CDK8P49336 464 aa23.42■■□□□ 1.34
R3HDM1-215ENST00000483021 ARPP21Q9UBL0 812 aaPredicted RBP23.42■■□□□ 1.34
R3HDM1-215ENST00000483021 CCND3P30281 292 aaPredicted RBP23.41■■□□□ 1.34
R3HDM1-215ENST00000483021 SHCBP1Q8NEM2 672 aa23.41■■□□□ 1.34
R3HDM1-215ENST00000483021 PUS7LQ9H0K6 701 aaKnown RBP23.41■■□□□ 1.34
R3HDM1-215ENST00000483021 DCTPP1Q9H773 170 aa23.41■■□□□ 1.34
R3HDM1-215ENST00000483021 VCPKMTQ9H867 229 aa23.41■■□□□ 1.34
R3HDM1-215ENST00000483021 GREB1LQ9C091 1923 aaPredicted RBP23.41■■□□□ 1.34
R3HDM1-215ENST00000483021 CYP2D7A0A087X1C5 515 aa23.4■■□□□ 1.34
R3HDM1-215ENST00000483021 WDR46O15213 610 aaKnown RBP23.4■■□□□ 1.34
R3HDM1-215ENST00000483021 CHGBP05060 677 aa23.4■■□□□ 1.34
R3HDM1-215ENST00000483021 C7orf61Q8IZ16 206 aa23.4■■□□□ 1.34
R3HDM1-215ENST00000483021 MOV10L1Q9BXT6 1211 aaKnown RBP23.4■■□□□ 1.34
R3HDM1-215ENST00000483021 SPATC1LQ9H0A9 340 aa23.4■■□□□ 1.34
R3HDM1-215ENST00000483021 COL11A1P12107 1806 aaPredicted RBP23.39■■□□□ 1.33
R3HDM1-215ENST00000483021 STRNO43815 780 aa23.39■■□□□ 1.33
R3HDM1-215ENST00000483021 MSCO60682 206 aa23.39■■□□□ 1.33
R3HDM1-215ENST00000483021 FLOT1O75955 427 aa23.39■■□□□ 1.33
R3HDM1-215ENST00000483021 DSG3P32926 999 aa23.39■■□□□ 1.33
R3HDM1-215ENST00000483021 ATP2B2Q01814 1243 aa23.39■■□□□ 1.33
R3HDM1-215ENST00000483021 LHX8Q68G74 356 aa23.39■■□□□ 1.33
R3HDM1-215ENST00000483021 CLEC10AQ8IUN9 316 aa23.39■■□□□ 1.33
R3HDM1-215ENST00000483021 KBTBD3Q8NAB2 608 aa23.39■■□□□ 1.33
R3HDM1-215ENST00000483021 KANSL2Q9H9L4 492 aa23.39■■□□□ 1.33
R3HDM1-215ENST00000483021 KIAA1755Q5JYT7 1200 aa23.38■■□□□ 1.33
R3HDM1-215ENST00000483021 CTR9Q6PD62 1173 aa23.38■■□□□ 1.33
R3HDM1-215ENST00000483021 SIAH1Q8IUQ4 282 aa23.38■■□□□ 1.33
R3HDM1-215ENST00000483021 FLRT1Q9NZU1 646 aa23.38■■□□□ 1.33
R3HDM1-215ENST00000483021 LAMA3Q16787 3333 aa23.38■■□□□ 1.33
R3HDM1-215ENST00000483021 PFASO15067 1338 aa23.37■■□□□ 1.33
R3HDM1-215ENST00000483021 DNAH12Q6ZR08 3092 aa23.37■■□□□ 1.33
R3HDM1-215ENST00000483021 COL6A1P12109 1028 aa23.37■■□□□ 1.33
R3HDM1-215ENST00000483021 GIMAP6Q6P9H5 292 aa23.37■■□□□ 1.33
R3HDM1-215ENST00000483021 DPP9Q86TI2 863 aa23.37■■□□□ 1.33
R3HDM1-215ENST00000483021 SPICE1Q8N0Z3 855 aa23.37■■□□□ 1.33
R3HDM1-215ENST00000483021 STRBPQ96SI9 672 aaKnown RBP23.37■■□□□ 1.33
R3HDM1-215ENST00000483021 MROH8Q9H579 483 aa23.37■■□□□ 1.33
R3HDM1-215ENST00000483021 SMIM22K7EJ46 135 aa23.36■■□□□ 1.33
R3HDM1-215ENST00000483021 ZFYP08048 801 aaPredicted RBP23.36■■□□□ 1.33
R3HDM1-215ENST00000483021 ERCC3P19447 782 aa23.36■■□□□ 1.33
R3HDM1-215ENST00000483021 ADORA2AP29274 412 aa23.36■■□□□ 1.33
R3HDM1-215ENST00000483021 SBK1Q52WX2 424 aa23.36■■□□□ 1.33
R3HDM1-215ENST00000483021 OLFML2BQ68BL8 750 aa23.36■■□□□ 1.33
R3HDM1-215ENST00000483021 NPLOC4Q8TAT6 608 aa23.36■■□□□ 1.33
R3HDM1-215ENST00000483021 APPBP2Q92624 585 aa23.36■■□□□ 1.33
R3HDM1-215ENST00000483021 GOPCQ9HD26 462 aa23.36■■□□□ 1.33
R3HDM1-215ENST00000483021 SLC5A4Q9NY91 659 aa23.36■■□□□ 1.33
R3HDM1-215ENST00000483021 EEF2P13639 858 aaKnown RBP23.35■■□□□ 1.33
R3HDM1-215ENST00000483021 PLS1Q14651 629 aa23.35■■□□□ 1.33
R3HDM1-215ENST00000483021 LRRFIP1Q32MZ4 808 aaKnown RBP23.35■■□□□ 1.33
R3HDM1-215ENST00000483021 ABRAQ8N0Z2 381 aa23.35■■□□□ 1.33
R3HDM1-215ENST00000483021 ATG4CQ96DT6 458 aa23.35■■□□□ 1.33
R3HDM1-215ENST00000483021 STAP2Q9UGK3 403 aa23.35■■□□□ 1.33
R3HDM1-215ENST00000483021 DDX20Q9UHI6 824 aaKnown RBP23.35■■□□□ 1.33
R3HDM1-215ENST00000483021 ROBO3Q96MS0 1386 aa23.35■■□□□ 1.33
R3HDM1-215ENST00000483021 ZNFX1Q9P2E3 1918 aaKnown RBP23.35■■□□□ 1.33
R3HDM1-215ENST00000483021 BMP8BP34820 402 aa23.34■■□□□ 1.33
R3HDM1-215ENST00000483021 GDF15Q99988 308 aa23.34■■□□□ 1.33
R3HDM1-215ENST00000483021 ZMYND8Q9ULU4 1186 aaPredicted RBP23.34■■□□□ 1.33
R3HDM1-215ENST00000483021 TTC41PQ6P2S7 1318 aa23.33■■□□□ 1.33
R3HDM1-215ENST00000483021 MYH4Q9Y623 1939 aa23.33■■□□□ 1.33
R3HDM1-215ENST00000483021 GSG1L2A8MUP6 293 aa23.33■■□□□ 1.33
R3HDM1-215ENST00000483021 RNF113AO15541 343 aaKnown RBP23.33■■□□□ 1.33
R3HDM1-215ENST00000483021 IGHA2P01877 340 aa23.33■■□□□ 1.33
R3HDM1-215ENST00000483021 GNAT2P19087 354 aa23.33■■□□□ 1.33
R3HDM1-215ENST00000483021 CNGA1P29973 690 aa23.33■■□□□ 1.33
R3HDM1-215ENST00000483021 CYP2C19P33261 490 aa23.33■■□□□ 1.33
R3HDM1-215ENST00000483021 NCAPG2Q86XI2 1143 aa23.33■■□□□ 1.33
R3HDM1-215ENST00000483021 OSBP2Q969R2 916 aa23.33■■□□□ 1.33
R3HDM1-215ENST00000483021 SLC25A27O95847 323 aa23.32■■□□□ 1.32
R3HDM1-215ENST00000483021 CYBAP13498 195 aa23.32■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms